EY729414

Overview
NameEY729414
Unique NameEY729414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11841 contig Csv1_Contig11841:1..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.902e-22
Identity = 65/163 (39.88%), Postives = 89/163 (54.60%), Query Frame = 3
Query:  402 QLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIISEEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQTNVIYYRGICHALQTICKDEGIWGFIR 890
            QLLAGG+AGA+S+T TAPL RL I+ QV G  SD     K +I+    +++ E G  + W+GN   +    P ++V F+AYE YKKLL          E      F  F SG +AG TA +  YP++++KTRLA       Y GI    + I K EG+  F +
Sbjct:  197 QLLAGGIAGAVSRTSTAPLDRLKIMMQVHGSKSD-----KMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLL--------TEEGQKIGTFERFISGSMAGATAQTFIYPMEVMKTRLAV-GKTGQYSGIYDCAKKILKHEGLGAFYK 345          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.484e-22
Identity = 64/167 (38.32%), Postives = 91/167 (54.49%), Query Frame = 3
Query:  405 LLAGGVAGALSKTCTAPLARLTILFQVQGMH--SDTATLRKASIWHEASRIISEEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQTNVIYYRGICHALQTICKDEGIWGFIRALF 899
            LL+GGVAGA+S+TCT+PL RL IL QV  M+   +    +   I      + + EGF  F+KGN   +    PYS++ F +YE YK  L  +   +        +LFV    GG AG+T+   TYPLDL+++RL  Q     Y GI    + I ++EG+ G  + LF
Sbjct:  142 LLSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAPKYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFL--LNNNDQTHLTTYENLFV----GGAAGVTSLLCTYPLDLIRSRLTVQVFGNKYNGIADTCKMIIREEGVAGLYKGLF 302          

HSP 2 Score: 72.0182 bits (175), Expect = 5.192e-12
Identity = 56/175 (32.00%), Postives = 79/175 (45.14%), Query Frame = 3
Query:  393 TISQLLAGGVAGALSKTCTAPL----ARLTILFQVQGMHSDTATLRKASIWHEASRIISEEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQ---TNVIYYRGICHALQTICKDEGIWGFIRAL 896
            T   L  GG AG  S  CT PL    +RLT+  QV G   +        I      II EEG    +KG   +     PY ++NF  YE+ KK    IP      ++ +  +      G ++G TA ++TYP+DL++ RL  Q      I Y G   A + I +DEG+ G    +
Sbjct:  241 TYENLFVGGAAGVTSLLCTYPLDLIRSRLTV--QVFGNKYN-------GIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTF--IP------KDTTPTVVQSLTFGAISGATAQTLTYPIDLIRRRLQVQGIGGKDILYNGTFDAFRKIIRDEGVLGLYNGM 398          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.747e-21
Identity = 63/163 (38.65%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  402 QLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIISEEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQTNVIYYRGICHALQTICKDEGIWGFIR 890
            QLLAGGVAGA+S+T TAPL RL ++ QV G  S      K +I+    +++ E G  + W+GN   +    P ++V F+AYE YKKLL          E      F  F SG +AG TA +  YP++++KTRLA       Y G+    + I K EG+  F +
Sbjct:  197 QLLAGGVAGAVSRTSTAPLDRLKVMMQVHGSKS-----AKMNIYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLL--------TEEGQKIGTFERFVSGSMAGATAQTFIYPMEVLKTRLAV-GKTGQYSGMFDCAKKILKYEGMGAFYK 345          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: TAAC_ARATH (Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.587e-21
Identity = 58/163 (35.58%), Postives = 89/163 (54.60%), Query Frame = 3
Query:  411 AGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIIS-EEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQTNVIYYRGICHALQTICKDEGIWGFIRAL 896
            AG  AGA +K+ TAPL R+ +L Q  G+ +   + +KA  + EA  +I  EEG   +WKGNL  +   +PYS+V  +AYE YKKL          G++    +    G+G  AG+T+  +TYPLD+++ RLA +     YR +      + ++EG+  F   L
Sbjct:  121 AGAFAGAAAKSVTAPLDRIKLLMQTHGVRAGQQSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETYKKLFR--------GKDGQLSVLGRLGAGACAGMTSTLITYPLDVLRLRLAVEPG---YRTMSQVALNMLREEGVASFYNGL 272          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.119e-21
Identity = 65/164 (39.63%), Postives = 89/164 (54.27%), Query Frame = 3
Query:  402 QLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIISEEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLA-AQTNVIYYRGICHALQTICKDEGIWGFIR 890
            QLLAGGVAGA+S+T TAPL RL ++ QV G  S        +I+    +++ E G  + W+GN   +    P ++V F+AYE YKKLL          E      F  F SG +AG TA +  YP++++KTRLA A+T    Y GI    + I K EG   F +
Sbjct:  197 QLLAGGVAGAVSRTSTAPLDRLKVMMQVHGSKS-------MNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLL--------TEEGQKLGTFERFISGSMAGATAQTFIYPMEVLKTRLAVAKTG--QYSGIYGCAKKILKHEGFGAFYK 343          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: EAAC_ARATH (Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.325e-20
Identity = 60/163 (36.81%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  411 AGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIIS-EEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQTNVIYYRGICHALQTICKDEGIWGFIRAL 896
            AG +AGA +KT TAPL R+ +L Q  G+     + +KA  + EA  +I+ EEG   +WKGNL  +   LPYS+V   AYE YK L          G++    +     +G  AG+T+  +TYPLD+++ RLA +     YR +     ++ +DEGI  F   L
Sbjct:   93 AGALAGAAAKTVTAPLDRIKLLMQTHGIRLGQQSAKKAIGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYESYKNLF--------KGKDDQLSVIGRLAAGACAGMTSTLLTYPLDVLRLRLAVEPR---YRTMSQVALSMLRDEGIASFYYGL 244          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 62/163 (38.04%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  402 QLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIISEEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQTNVIYYRGICHALQTICKDEGIWGFIR 890
            QLLAGG+AGA+S+T TAPL RL ++ QV G  S        +I+    ++I E G  + W+GN   +    P ++V F+ YE YKKLL          E      F  F SG +AG TA +  YP++++KTRLA       Y GI    + I K EG   F +
Sbjct:  197 QLLAGGIAGAVSRTSTAPLDRLKVMMQVHGSKS-------MNIFGGFRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLL--------TEEGQKIGTFERFISGSMAGATAQTFIYPMEVMKTRLAV-GKTGQYSGIYDCAKKILKYEGFGAFYK 343          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: S2542_HUMAN (Solute carrier family 25 member 42 OS=Homo sapiens GN=SLC25A42 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 62/164 (37.80%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  396 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIIS----EEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQTNVIYYRGICHALQTICKDEGI 875
            +S LL+G +AGAL+KT  APL R  I+FQV                 EA R++      EGF + W+GN  T+   +PY+++ F A+E YK++L +              LF    +G LAG TAAS+TYPLDLV+ R+A  T    Y  I H    I ++EG+
Sbjct:   34 LSSLLSGALAGALAKTAVAPLDRTKIIFQVSSKRFSAK---------EAFRVLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGSYYGFRGEALPPWPRLF----AGALAGTTAASLTYPLDLVRARMAV-TPKEMYSNIFHVFIRISREEGL 183          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 3
Query:  396 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIISEEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVH-FGSGGLAGITAASVTYPLDLVKTRLAAQTNVIY-YRGICHALQTI-CKDEGIWGFIRAL 896
            +   LAGG+AG  +KT  APL R+ +L Q    H      +   ++     +  +EGF   +KGN   +    PY ++ F A+EHYK L+            +     VH   +G +AG+TA   TYPLD+V+ RLA Q    + Y GI HA +TI  K+ G +GF R L
Sbjct:   37 LRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNHH-----YKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITT---------KLGISGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVKGEHSYTGIIHAFKTIYAKEGGFFGFYRGL 192          

HSP 2 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 3
Query:  390 GTISQLLAGGVAGALSKTCTAPL--ARLTILFQVQGMHSDTATLRKASIWHEASRIISEEG-FXAFWKGNLVTIAHRLPYSSVNFYAYEHYKK--LLHAIPVVESXGENMSSDLF----VHFGSGGLAGITAASVTYPLDLVKTRLAAQT 812
            G + +L+AG +AG  +  CT PL   R+ + FQV+G HS T  +      H    I ++EG F  F++G + TI    PY+ V+F+ +   K   L HA  ++     +  + L     V+   GG+AG  A +++YP D+ + R+   T
Sbjct:  129 GHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVKGEHSYTGII------HAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRMQLGT 272          
BLAST of EY729414 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.358e-19
Identity = 59/169 (34.91%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  396 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWHEASRIISEEGFXAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESXGENMSSDLFVHFGSGGLAGITAASVTYPLDLVKTRLAAQTNVIY-YRGICHALQTI-CKDEGIWGFIRAL 896
            +   LAGG+AG  +KT  APL R+ +L Q    H      R   ++     +  +EG+   +KGN   +    PY ++ F A+EHYK L+     V      +         +G +AG+TA   TYPLD+V+ RLA Q    + Y GI HA +TI  K+ G  GF R L
Sbjct:   35 LRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNHH-----YRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGHVHRLM--------AGSMAGMTAVICTYPLDMVRVRLAFQVKGEHTYTGIIHAFKTIYAKEGGFLGFYRGL 190          
The following BLAST results are available for this feature:
BLAST of EY729414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
SCMC1_HUMAN1.902e-2239.88Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFB_DICDI2.484e-2238.32Mitochondrial substrate carrier family protein B O... [more]
SCMC1_BOVIN2.747e-2138.65Calcium-binding mitochondrial carrier protein SCaM... [more]
TAAC_ARATH3.587e-2135.58Thylakoid ADP,ATP carrier protein, chloroplastic O... [more]
SCMC1_MOUSE6.119e-2139.63Calcium-binding mitochondrial carrier protein SCaM... [more]
EAAC_ARATH2.325e-2036.81Probable envelope ADP,ATP carrier protein, chlorop... [more]
SCMC1_RABIT6.765e-2038.04Calcium-binding mitochondrial carrier protein SCaM... [more]
S2542_HUMAN1.968e-1937.80Solute carrier family 25 member 42 OS=Homo sapiens... [more]
GDC_HUMAN1.968e-1935.29Graves disease carrier protein OS=Homo sapiens GN=... [more]
GDC_BOVIN3.358e-1934.91Graves disease carrier protein OS=Bos taurus GN=SL... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-F03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729414 ID=EY729414; Name=EY729414; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGCCCACGCGTCCGCAAAAGGAAGGAACGTTGTTGATTTAT
TGGCTAAATTTTCGAAAAAGTTCAAATTTTTTACTCTGTCATTAGCGTTT
CCAGAAATGGGTTTGTGATTTTTTACTCGTTTGTTTGCTTCTTTTGTCGC
AAATACGATTACTTTGATCTTTCTTCATTGCAAAGGAATCGTTTTTATTT
ACATTTTGAATAAAAAACGCAGAGCTTGAGGGTTTTTGACTTACATTAGG
GATGCAAACAGAAGCAAGAGTAGGGGTGGTGGTAGAAGGAGGCCAAAGAG
GTTTAAGTTCAGGCAATGGAAGTGTTTCTGTTGATAAAATAACGCTGCAA
CAGCAACAGAAACAAATGTTGCAGAATCAGTCCCAGATCGGGACAATATC
CCAGCTTTTAGCTGGAGGTGTAGCTGGTGCTCTTAGTAAAACCTGTACGG
CTCCTCTTGCAAGGCTTACCATTCTCTTTCAGGTGCAAGGCATGCACTCT
GATACTGCAACATTGAGAAAGGCTAGCATATGGCATGAGGCTTCCCGAAT
CATTAGTGAAGAAGGATTTANGGCTTTTTGGAAAGGGAATCTGGTCACAA
TTGCTCACCGACTACCATATTCTTCTGTCAACTTTTATGCATATGAACAC
TATAAAAAGTTGCTACACGCCATTCCAGTGGTGGAAAGTCANGGGGAAAA
TATGAGTTCAGATCTTTTTGTACATTTTGGTAGCGGTGGTTTAGCAGGAA
TAACAGCTGCCTCTGTTACATACCCATTGGACCTTGTGAAGACACGCCTT
GCTGCTCAGACAAATGTGATCTACTACAGAGGTATTTGTCATGCTTTACA
AACTATTTGCAAAGATGAGGGAATTTGGGGCTTTATAAGGGCCTTGTTCG
ACG
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