EY729392

Overview
NameEY729392
Unique NameEY729392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: Y9880_DICDI (CaiB/baiF CoA-transferase family protein DDB_G0269880 OS=Dictyostelium discoideum GN=DDB_G0269880 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.351e-47
Identity = 91/190 (47.89%), Postives = 129/190 (67.89%), Query Frame = 3
Query:  240 LTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLPGAGRKSRGGGCDLMTGRDSTVAIQAGL 809
            L G ++LDLSRVLAGP+  Q+  DLGA+VIK+E    GDDTR +GPP+   + G     ++Y+   NR K S+ +D++T EGQ++V +LA  SDV IEN+K G L +Y LDY T+ +INP ++YCSITGFGQ G  ++ PGYDF +  +GGL++ITG++++    G        D+MTG  + +AIQA L
Sbjct:   30 LNGFKILDLSRVLAGPYATQIFGDLGAQVIKVENVGKGDDTRQYGPPFYVDEQGRKG--SAYFSCANRNKKSIALDISTKEGQDIVYSLAKESDVFIENFKVGGLKKYSLDYETIKQINPSIIYCSITGFGQDGEYSKLPGYDFSVQAMGGLISITGDKENPYKCGVAI----VDMMTGLYANIAIQAAL 213          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: CG010_RAT (CaiB/baiF CoA-transferase family protein C7orf10 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.801e-41
Identity = 92/195 (47.18%), Postives = 120/195 (61.54%), Query Frame = 3
Query:  231 MGALTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLPGAGRKSRGGGC--DLMTGRDSTVAIQAGL 809
            M  L G+R+LDL+RVLAGP+    L DLGAEVIK+ER  +GDDTR WGPP++ T++       +Y+ S NR K S+ +++    G  +V+ LAA  DV +ENY  G L+  GL Y  + +I P +VYCSITG+GQTGP +   GYD I   + GLM+ITG  D     G   R G    DL TG  +  AI AGL
Sbjct:   36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTES-------TYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPED-----GDPVRPGVAMTDLATGLFAYGAIMAGL 218          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: CG010_MOUSE (CaiB/baiF CoA-transferase family protein C7orf10 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.160e-40
Identity = 91/195 (46.67%), Postives = 120/195 (61.54%), Query Frame = 3
Query:  231 MGALTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLPGAGRKSRGGGC--DLMTGRDSTVAIQAGL 809
            M  L G+R+LDL+RVLAGP+    L DLGAEVIK+ER  +GDDTR WGPP++ T++       +Y+ S NR K S+ +++    G  +V+ LAA  DV +ENY  G L+  GL Y  + +I P ++YCSITG+GQTGP +   GYD I   + GLM+ITG  D     G   R G    DL TG  +  AI AGL
Sbjct:   36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTES-------TYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPED-----GDPVRPGVAMTDLATGLFAYGAIMAGL 218          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: CG010_HUMAN (CaiB/baiF CoA-transferase family protein C7orf10 OS=Homo sapiens GN=C7orf10 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.515e-40
Identity = 90/199 (45.23%), Postives = 123/199 (61.81%), Query Frame = 3
Query:  240 LTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLPGAGRKSRGGGC--DLMTGRDSTVAIQAGLFSPNAPG 830
            L G+++LDL+RVLAGP+    L DLGAEVIK+ER  +GDDTR WGPP++ T++       +YY S NR K S+ +++   +G ++++ LAA  DV +ENY  G L+  GL Y  + EI P ++YCSITG+GQTGP ++  GYD +   + GLM+ITG     P  G   R G    DL TG  +  AI AGL      G
Sbjct:   48 LEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTES-------TYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITG-----PENGDPVRPGVAMTDLATGLYAYGAIMAGLIQKYKTG 234          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: YFDE_ECOLI (Uncharacterized protein yfdE OS=Escherichia coli (strain K12) GN=yfdE PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.214e-30
Identity = 74/184 (40.22%), Postives = 101/184 (54.89%), Query Frame = 3
Query:  234 GALTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLP---GAGRKSRGGGCDLMTG 776
            G   GL V+D++ VL GP+  Q+L ++GA VIK+E    GDDTR +GP           GQ+ YY   N GK SV +DL     + +   +   +DVL EN++ G++ + G  + TL EINPRL+Y S +GFG TGP  + P YD II  + G+M  TG  D  P   G       GG  L +G
Sbjct:    8 GPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGP--------YVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFSG 183          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: FCTA_RHOPT (Formyl-coenzyme A transferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=frc PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25
Identity = 73/183 (39.89%), Postives = 99/183 (54.10%), Query Frame = 3
Query:  237 ALTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLP---GAGRKSRGGGCDLMTG 776
            AL G+RVLD + V +GP C Q+LA  GA+VIK+ER  SGD TRG      K D+        Y+   N  K S+ +D    +G+E++ AL  + DVL+EN+  G L R G  +  + EINPR++  SI GFG  GP  +   Y+ +    GG  + TG R+ LP   GA     G G  L  G
Sbjct:    4 ALDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDS-------LYFTMLNHNKRSITLDTKNPKGKEVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFG-PGPYEDCKVYENVAQCTGGAASTTGFREGLPLVTGAQIGDSGTGLHLALG 178          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: FCTA_RHOPA (Formyl-coenzyme A transferase OS=Rhodopseudomonas palustris GN=frc PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25
Identity = 73/183 (39.89%), Postives = 99/183 (54.10%), Query Frame = 3
Query:  237 ALTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLP---GAGRKSRGGGCDLMTG 776
            AL G+RVLD + V +GP C Q+LA  GA+VIK+ER  SGD TRG      K D+        Y+   N  K S+ +D    +G+E++ AL  + DVL+EN+  G L R G  +  + EINPR++  SI GFG  GP  +   Y+ +    GG  + TG R+ LP   GA     G G  L  G
Sbjct:    4 ALDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDS-------LYFTMLNHNKRSITLDTKNPKGKEVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFG-PGPYEDCKVYENVAQCTGGAASTTGFREGLPLVTGAQIGDSGTGLHLALG 178          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: FCTA_RHOPS (Formyl-coenzyme A transferase OS=Rhodopseudomonas palustris (strain BisB5) GN=frc PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 72/183 (39.34%), Postives = 98/183 (53.55%), Query Frame = 3
Query:  237 ALTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLP---GAGRKSRGGGCDLMTG 776
            AL G+R+LD + V +GP C Q+LA  GA+VIK+ER  +GD TRG      K D+        Y+   N  K S+ +D    +G+E++ AL  S DVL+EN+  G L R G  +  + EINPR++  SI GFG  GP  +   Y+ +    GG  + TG RD  P   GA     G G  L  G
Sbjct:    4 ALDGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGTGDITRGQLQDIPKVDS-------LYFTMLNHNKRSITLDTKNPKGKEVLTALIRSCDVLVENFGPGVLDRMGFTWDKIQEINPRMIVASIKGFG-PGPYEDCKVYENVAQCTGGAASTTGFRDGPPLVTGAQIGDSGTGLHLALG 178          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: FCTA_RHOP2 (Formyl-coenzyme A transferase OS=Rhodopseudomonas palustris (strain HaA2) GN=frc PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 72/183 (39.34%), Postives = 98/183 (53.55%), Query Frame = 3
Query:  237 ALTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLP---GAGRKSRGGGCDLMTG 776
            AL G+R+LD + V +GP C Q+LA  GA+VIK+ER  +GD TRG      K D+        Y+   N  K S+ +D    +G+E++ AL  S DVL+EN+  G L R G  +  + EINPR++  SI GFG  GP  +   Y+ +    GG  + TG RD  P   GA     G G  L  G
Sbjct:    4 ALDGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGTGDITRGQLQDIPKVDS-------LYFTMLNHNKRSITLDTKNPKGKEVLTALIRSCDVLVENFGPGVLDRMGFTWDKIQEINPRMIVASIKGFG-PGPYEDCKVYENVAQCTGGAASTTGFRDGPPLVTGAQIGDSGTGLHLALG 178          
BLAST of EY729392 vs. ExPASy Swiss-Prot
Match: FCTA_OLICO (Formyl-coenzyme A transferase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=frc PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24
Identity = 70/183 (38.25%), Postives = 98/183 (53.55%), Query Frame = 3
Query:  237 ALTGLRVLDLSRVLAGPWCGQVLADLGAEVIKIERAQSGDDTRGWGPPWMKTDTGESSGQASYYQSTNRGKLSVGIDLATSEGQELVRALAASSDVLIENYKAGSLARYGLDYTTLAEINPRLVYCSITGFGQTGPRAEEPGYDFIIHGIGGLMNITGERDDLP---GAGRKSRGGGCDLMTG 776
            AL G+R+LD + V +GP C Q+LA  GA+VIK+ER  +GD TRG        D+        Y+   N  K S+ +D    +G+E++ AL  S DV++EN+  G L R G  +  + +INP+L+  SI GFG  GP  +   Y+ +    GG  + TG RD LP   GA     G G  L  G
Sbjct:    4 ALNGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGTGDITRGQLQDVPNADS-------LYFTMLNHNKRSITLDAKNPKGKEVLTALIKSCDVMVENFAPGVLDRMGFSWENIQKINPKLIVASIKGFG-PGPFEDCKVYENVAQCTGGSASTTGFRDGLPLVTGAQIGDSGTGLHLALG 178          
The following BLAST results are available for this feature:
BLAST of EY729392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
Y9880_DICDI6.351e-4747.89CaiB/baiF CoA-transferase family protein DDB_G0269... [more]
CG010_RAT6.801e-4147.18CaiB/baiF CoA-transferase family protein C7orf10 h... [more]
CG010_MOUSE1.160e-4046.67CaiB/baiF CoA-transferase family protein C7orf10 h... [more]
CG010_HUMAN1.515e-4045.23CaiB/baiF CoA-transferase family protein C7orf10 O... [more]
YFDE_ECOLI9.214e-3040.22Uncharacterized protein yfdE OS=Escherichia coli (... [more]
FCTA_RHOPT4.006e-2539.89Formyl-coenzyme A transferase OS=Rhodopseudomonas ... [more]
FCTA_RHOPA4.006e-2539.89Formyl-coenzyme A transferase OS=Rhodopseudomonas ... [more]
FCTA_RHOPS1.166e-2439.34Formyl-coenzyme A transferase OS=Rhodopseudomonas ... [more]
FCTA_RHOP21.166e-2439.34Formyl-coenzyme A transferase OS=Rhodopseudomonas ... [more]
FCTA_OLICO2.597e-2438.25Formyl-coenzyme A transferase OS=Oligotropha carbo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729392 ID=EY729392; Name=EY729392; organism=Citrus sinensis; type=EST; length=892bp
CATCGACCAGGCCGTACAACTCGGCCTGGGTTACCGCAGGGGCCGCTGGC
GTGGGGCGATGCCCTCGGGCCCCGGCGCATCCTCACGATTTTGCAGCGCA
TGAGCGAACTCACCCACGACCCACGTTATCGTCCAAGCCCCTGGCTGCGG
CGGCGTGCAGTGCTGGGGATTTCCCTGCGTCATGAAGAGCCGGCAGTCGG
CTGATTTCGATTCATCACAGGACAAGAATAATGGGTGCATTGACAGGTTT
GCGGGTGCTGGATTTAAGCCGGGTATTGGCCGGGCCCTGGTGTGGCCAGG
TATTGGCCGACCTCGGCGCCGAAGTGATCAAGATCGAACGGGCGCAAAGC
GGTGACGACACCCGTGGTTGGGGCCCGCCGTGGATGAAAACCGACACTGG
CGAGTCGTCCGGGCAAGCGTCTTATTACCAGTCCACCAACCGCGGCAAAT
TATCCGTGGGCATCGACCTCGCCACCTCCGAAGGCCAGGAACTGGTGCGA
GCCCTGGCGGCCAGCTCCGACGTACTGATCGAAAACTACAAAGCCGGCTC
CCTGGCGCGTTATGGGCTGGATTACACGACCCTGGCCGAGATCAATCCGC
GGCTGGTGTATTGCTCCATCACCGGCTTCGGCCAAACCGGCCCGCGTGCC
GAAGAGCCCGGCTACGACTTCATCATCCACGGCATCGGCGGCCTGATGAA
CATCACCGGCGAACGCGACGACCTGCCGGGGGCGGGCCGGAAAAGTCGGG
GTGGCGGTTGCGACCTNATGACCGGCCGGGATTCCACCGTCGCCATCCAA
GCCGGACTGTTCAGCCCGAACGCACCGGGGGTGGCCAAAACATCACAAAG
GCGCCGCTGGGAGTTAAGGTGCCAACCCTTGCCACCAAAAGT
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