EY729349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_CHLTR (Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia trachomatis GN=nrdA PE=3 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 6.049e-42 Identity = 100/268 (37.31%), Postives = 149/268 (55.60%), Query Frame = -2 Query: 11 ITIEEIQDQVXXALMRAGEQKVARDYVIYXDSGAKERAVRSPAEEAAVQ---AHPSIRITLADGTLXPLDLGRXNTIITEACEGLEEV-DGDLIQRETLKNLYDGVALTDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTP 802 I IE+IQD V LM G VA++Y++Y ++ A+ R R E+ + + A ++ + DG+ + + + AC E D L+ N Y G+ ++V A +M AR +E+EP+Y+FV A LL+D + E LG A+ ++ + YIA+G + L + FDL+ L A++ RD QF+Y+G+Q LYDRYF H +G R E PQ+F+MRVAMGLA+ E+ K AI FYNLLS+F Y +TP Sbjct: 183 IDIEKIQDIVEQQLMVVGHYAVAKNYILYREARARVRDNRE--EDGSTEKTIAEEAVEVLSKDGSTYTMTHSQLLAHLARACSRFPETTDAALLTDMAFANFYSGIKESEVVLACIMAARANIEKEPDYAFVAAELLLDVVYKEALGKSKYAE-----DLEQAHRDHFKRYIAEGDTYRLNAELKHLFDLDALADAMDLSRDLQFSYMGIQNLYDRYFNHHEGCRLETPQIFWMRVAMGLALNEQDKTSWAITFYNLLSTFRYTPATP 443
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_CHLPN (Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia pneumoniae GN=nrdA PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.049e-42 Identity = 105/267 (39.33%), Postives = 152/267 (56.93%), Query Frame = -2 Query: 11 ITIEEIQDQVXXALMRAGEQKVARDYVIYXDSGAKERAVRSP-AEEAAVQAHPSIRITLADGTLXPLDLGRXNTIITEACEGLEEV-DGDLIQRETLKNLYDGVALTDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEE-KQKEDRAIEFYNLLSSFDYMSSTP 802 I +EEIQD V LM AG VA++Y++Y ++ A+ RA + +E V + + DGT L + AC+ + D L+ NLY G+ +V TA +M AR +EREP+Y+F+ A LL +L E LG S+ +++++ K YI G E+ L NP L +DL+ L + ++ RDQQF+Y+G+Q LYDRYF +G R E Q+F+MRV+MGLA+ E +QK AI FYNLLS+F Y +TP Sbjct: 181 INLEEIQDIVEKQLMVAGYYDVAKNYILYREARARARANKDQDGQEEFVPQEETYVVQKEDGTTYLLRKTDLEKRFSWACKRFPKTTDSQLLADMAFMNLYSGIKEDEVTTACIMAARANIEREPDYAFIAAELLTSSLYEETLGC-----SSQDPNLSEIHKKHFKEYILNGEEYRL-NPQLKDYDLDALSEVLDLSRDQQFSYMGVQNLYDRYFNLHEGRRLETAQIFWMRVSMGLALNEGEQKNFWAITFYNLLSTFRYTPATP 441
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_CHLMU (Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia muridarum GN=nrdA PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.760e-41 Identity = 101/268 (37.69%), Postives = 146/268 (54.48%), Query Frame = -2 Query: 11 ITIEEIQDQVXXALMRAGEQKVARDYVIYXDSGAKERAVRSPAEEAAVQAHPS---IRITLADGTLXPLDLGRXNTIITEACEGLEEV-DGDLIQRETLKNLYDGVALTDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTP 802 I IE+IQD V LM G A++Y++Y ++ A+ R R E+ V+ PS + DG+ + + + AC E D L+ N Y G+ ++V A +M AR +E+EP+Y+FV A LL+D + E L S ++ +Y YI +G + L + FDL+ L A++ RD QF+Y+G+Q LYDRYF H DG R E PQ+F+MRVAMGLA++E+ K AI FYNLLS+F Y +TP Sbjct: 183 IDIEQIQDIVEQQLMVVGHYATAKNYILYREARARVRDNR--VEDQIVEEAPSEETFEVLSKDGSTYMITHSQLLARLARACSRFPETTDAALLTDMAFSNFYSGIKESEVVLACIMAARANIEKEPDYAFVAAELLLDVVYKEALD-----RSRGDEDLEQVYRDHFKRYIMEGDSYRLNPELKNLFDLDALANAMDLSRDLQFSYMGIQNLYDRYFNHDDGRRLETPQIFWMRVAMGLALKEQDKTYWAITFYNLLSTFRYTPATP 443
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_HELPY (Ribonucleoside-diphosphate reductase subunit alpha OS=Helicobacter pylori GN=nrdA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22 Identity = 71/214 (33.18%), Postives = 106/214 (49.53%), Query Frame = -2 Query: 11 IRITLADGTLXPLDLGRXNTIITEACEGLEEVDGDLIQRETLKNLYDGVALTDVNTALVMTARTLVERE-PNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIR--FELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTP 643 I + +G + PLD+ + +A + LE V ++ + D + ++ L+ TA ++ + PN+SFV +RL + L + GF G + E A+ + L + K FDLE L I ERD QF YLG++TLYDRY + KD ELPQ FM +AM LA E++ A+EFY +LS F+ M +TP Sbjct: 2 ITVVKRNGRIEPLDITKIQKYTKDATDNLEGVSQSELEVDARLQFRDKITTEEIQQTLIKTAVDKIDIDTPNWSFVASRLFLYDLYHKVSGFTGYRHLKEYFENAEEKGRILKGFKEK-------------FDLEFLNSQIKPERDFQFNYLGIKTLYDRYLL-KDANNNPIELPQHMFMSIAMFLAQNEQEPNKIALEFYEVLSKFEAMCATP 201
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_HELPJ (Ribonucleoside-diphosphate reductase subunit alpha OS=Helicobacter pylori J99 GN=nrdA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22 Identity = 71/214 (33.18%), Postives = 106/214 (49.53%), Query Frame = -2 Query: 11 IRITLADGTLXPLDLGRXNTIITEACEGLEEVDGDLIQRETLKNLYDGVALTDVNTALVMTARTLVERE-PNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIR--FELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTP 643 I + +G + PLD+ + +A + LE V ++ + D + ++ L+ TA ++ + PN+SFV +RL + L + GF G + E A+ + L + K FDLE L I ERD QF YLG++TLYDRY + KD ELPQ FM +AM LA E++ A+EFY +LS F+ M +TP Sbjct: 2 ITVVKRNGRIEPLDITKIQKYTKDATDNLEGVSQSELEVDARLQFRDKITTEEIQQTLIKTAVDKIDIDTPNWSFVASRLFLYDLYHKVSGFTGYRHLKEYFENAEEKGRILKGFKEK-------------FDLEFLNSQIKPERDFQFNYLGIKTLYDRYLL-KDANNHPIELPQHMFMSIAMFLAQNEQELNKIALEFYEVLSKFEAMCATP 201
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_AQUAE (Ribonucleoside-diphosphate reductase subunit alpha OS=Aquifex aeolicus GN=nrdA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.039e-17 Identity = 68/213 (31.92%), Postives = 101/213 (47.42%), Query Frame = -2 Query: 11 GTLXPLDLGRXNTIITEACEGLEEVDGDLIQRETLKNLYDGVALTDVNTALVMTARTLVERE-PNYSFVTARLLM-----DTLRAEGLGFLGVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIH-KDGIRFELPQVFFMRVAMGLAIEEKQKE--DRAIEFYNLLSSFDYMSSTP 622 G LD+ + I ACEGL VD ++ + DG+ ++ L+ TA V E P++++ ARLL+ D G + + Y+ + Y+ KGI E L + D KL I ERD FTY G++ LYDRY + ++G ELPQ +M +AM LA+ EK +E A +FY++LS +TP Sbjct: 10 GRKEKLDINKIRIAIKFACEGLN-VDPLELEADAQIQFRDGITTKEIQQLLIKTAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLGKYKPYNRKNFYS-FVKEYVEKGIYGEYLLENYSEEDFNKLANYIKPERDLYFTYTGIKILYDRYLVRDEEGRVIELPQEMYMLIAMTLAVPEKPEERLKWAKKFYDVLSEHKVTVATP 220
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_PONAB (Ribonucleoside-diphosphate reductase large subunit OS=Pongo abelii GN=RRM1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14 Identity = 63/209 (30.14%), Postives = 98/209 (46.89%), Query Frame = -2 Query: 11 DGTLXPLDLGRXNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALP--AYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTP 625 DG + + + I + C GL + VD I + ++ LY GV +++T TA TL + P+Y+ + AR+ + L E A M DLY P + + L+ +LA D +L AI ++RD + Y G +TL Y + +G E PQ MRV++G+ K+ D AIE YNLLS + ++P Sbjct: 7 DGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKE-------AKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKD--RLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGI---HKEDIDAAIETYNLLSERWFTHASP 203
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_HUMAN (Ribonucleoside-diphosphate reductase large subunit OS=Homo sapiens GN=RRM1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.189e-13 Identity = 62/209 (29.67%), Postives = 97/209 (46.41%), Query Frame = -2 Query: 11 DGTLXPLDLGRXNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALP--AYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTP 625 DG + + + I + C GL + VD I + ++ LY GV +++T TA TL + P+Y+ + AR+ + L E M DLY P + + L+ +LA D +L AI ++RD + Y G +TL Y + +G E PQ MRV++G+ K+ D AIE YNLLS + ++P Sbjct: 7 DGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKE-------TKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKD--RLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGI---HKEDIDAAIETYNLLSERWFTHASP 203
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_MOUSE (Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus GN=Rrm1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 61/209 (29.19%), Postives = 96/209 (45.93%), Query Frame = -2 Query: 11 DGTLXPLDLGRXNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALP--AYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTP 625 DG + + + I + C GL + VD I + ++ LY GV +++T TA TL + P+Y+ + AR+ + L E M DLY P + + L+ ++A D +L AI ++RD + Y G +TL Y + +G E PQ MRV++G+ K+ D AIE YNLLS + + P Sbjct: 7 DGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKE-------TKKVFSDVMEDLYNYINPHNGRHSPMVASSTLDIVMANKD--RLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGI---HKEDIDAAIETYNLLSEKWFTHAPP 203
BLAST of EY729349 vs. ExPASy Swiss-Prot
Match: RIR1_DANRE (Ribonucleoside-diphosphate reductase large subunit OS=Danio rerio GN=rrm1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13 Identity = 61/209 (29.19%), Postives = 96/209 (45.93%), Query Frame = -2 Query: 11 DGTLXPLDLGRXNTIITEACEGLEE--VDGDLIQRETLKNLYDGVALTDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADL--YAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTP 625 DG + + + I + C GL VD I + ++ LY GV +++T TA T + P+Y+ + AR+ + L E M DL Y L + + I E L+ +LA D +L AI ++RD + + G +TL Y + +G E PQ MRV++G+ K+ AIE YNLLS + ++P Sbjct: 7 DGGQEGVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLAAETAATSTTKHPDYAILAARIAVSNLHKE-------TKKVFSEVMEDLYNYVNPLNSRHSPMISKETLDIVLANKD--RLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGI---HKEDIAAAIETYNLLSEKWFTHASP 203 The following BLAST results are available for this feature:
BLAST of EY729349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729349 ID=EY729349; Name=EY729349; organism=Citrus sinensis; type=EST; length=881bpback to top |