EY729348

Overview
NameEY729348
Unique NameEY729348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY729348_ssr127 microsatellite EY729348_ssr127:127..136. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11834 contig Csv1_Contig11834:1..880. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.779e-45
Identity = 107/199 (53.77%), Postives = 131/199 (65.83%), Query Frame = 1
Query:  283 MGICLSARIKAESPFNTGVSSKYVSSDGNDMXXXXXXXXXXXVPPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS-CEIDWILLGG*HRLLVYESCLEAAWRIFV-*EGLLFPSSSWNLP*RWS-XCC*GGAFLH 870
            MGICLSA++KAES   +G S+KY   D  D+           V P+PR+EGEIL+SPNLKSFSF++LK+ATRNFRPDSVLGEGGFG VFKGWIDE S  A++P TG+VIAVK+LNQDG+QGH EWLAEV   G F+ +   ++    L   HRLLVYE     +    +   GL F   SW L  + +     G AFLH
Sbjct:    1 MGICLSAQVKAES---SGASTKY---DAKDIGSLGSKASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLH 193          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 9.858e-45
Identity = 108/204 (52.94%), Postives = 129/204 (63.24%), Query Frame = 1
Query:  283 MGICLSARIKAESPFNTGVSSKYVSSDGNDMXXXXXXXXXXXVPPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS-CEIDWILLGG*HRLLVYESCLEAAWRIFV*EGLLFPSSSWNLP*RWS-------XCC*GGAFLH 870
            MGICLSA+IKA SP   G S KY+SS+ ND            +   PR+EGEIL+SPNLKSF+F++LK ATRNFRPDSVLGEGGFGSVFKGWIDE +  A+KP TG+VIAVK+LNQDG+QGH EWLAEV   G F+  +  ++    L   HRLLVYE     +      E  LF   S+  P  W+           G AFLH
Sbjct:    1 MGICLSAQIKAVSP---GASPKYMSSEANDSLGSKSSSVS--IRTNPRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSL-----ENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH 194          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 97/199 (48.74%), Postives = 121/199 (60.80%), Query Frame = 1
Query:  283 MGICLSARIKAESPFNTGVSSKYVSSDGNDMXXXXXXXXXXXVPPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS-CEIDWILLGG*HRLLVYESCLEAAWRIFV-*EGLLFPSSSWNLP*RWS-XCC*GGAFLH 870
            MG C S RIK +   +T +SSK++S DG+                 PR+EGEIL++ NLK+FS S+LK+ATRNFRPDSV+GEGGFG VFKGWIDE S A +KP TG+VIAVKRLNQ+GFQGH EWLAE+   G     +  ++    L   HRLLVYE     +    +   G  +   SWN   R +     G AFLH
Sbjct:    1 MGGCFSNRIKTDIASSTWLSSKFLSRDGSKGSSTASFSYM------PRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH 193          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.656e-33
Identity = 78/158 (49.37%), Postives = 99/158 (62.66%), Query Frame = 1
Query:  283 MGICLSARIKAESPFNTGVSSKYVSSDGNDMXXXXXXXXXXXVPPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS-CEIDWILLGG*HRLLVYE 753
            MG C S+R+KA+   N   S  Y  S  +             V    ++EGEIL S  +KSF+F++LK ATRNFRPDSV+GEGGFG VFKGW+DE +   TKP TG+VIAVK+LNQ+GFQGH EWL E+   G  +  +  ++    L   HRLLVYE
Sbjct:    1 MGSCFSSRVKADIFHNGKSSDLYGLSLSS-------RKSSSTVAAAQKTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYE 151          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.328e-32
Identity = 67/114 (58.77%), Postives = 87/114 (76.32%), Query Frame = 1
Query:  415 PTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS-CEIDWILLGG*HRLLVYE 753
            PTPR+EGEIL SPNLK+F+F++LK ATRNFRPDS+LGEGGFG VFKGWID  +  A+KP +G+V+AVK+L  +G+QGH EWL EV   G  +  +  ++    + G +RLLVYE
Sbjct:   54 PTPRTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYE 167          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.958e-30
Identity = 66/117 (56.41%), Postives = 87/117 (74.36%), Query Frame = 1
Query:  415 PTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQSCEIDWILLG----G*HRLLVYE 753
            PT R+EGEIL SPNLK+F+F++LK AT+NFR D++LGEGGFG VFKGWID+ S  A++P +G+V+AVK+L  +GFQGH EWL EV   G  +  +     +L+G    G +RLLVYE
Sbjct:   57 PTLRTEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLV---LLVGYCAEGENRLLVYE 170          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.904e-29
Identity = 73/158 (46.20%), Postives = 98/158 (62.03%), Query Frame = 1
Query:  283 MGICLSARIKAESPFNTGVSSKYVSSDGNDMXXXXXXXXXXXVPPTPRSEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS-CEIDWILLGG*HRLLVYE 753
            MG CLS+R+  +S  ++G+   ++SS  +                  ++EGEIL S  +KSFSF++LK ATRNFR DSV+GEGGFG VF+GW+DE +   TK  +G+VIAVKRLN DGFQGH EWL E+   G  +  +  ++    L    RLLVYE
Sbjct:    1 MGSCLSSRVLNKS--SSGLDDLHLSSCKSSSSATAH-----------KTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYE 145          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 6.070e-26
Identity = 56/152 (36.84%), Postives = 86/152 (56.58%), Query Frame = 1
Query:  283 MGICLSARIKAESPFNTGVSSKYVS---SDGNDMXXXXXXXXXXXVPPTPR----------SEGEILRSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS 699
            MG C+S    + SP  TG+ S   +   S+G +            V    +            G++L SPNLK ++F DLKTAT+NF+PDS+LG+GGFG V++GW+D  + A ++  +GM++A+KRLN +  QG  EW +EV   G  + ++
Sbjct:    1 MGACISF-FSSSSPSKTGLHSHATTNNHSNGTEFSSTTGATTNSSVGQQSQFSDISTGIISDSGKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRN 151          

HSP 2 Score: 33.4982 bits (75), Expect = 6.070e-26
Identity = 19/45 (42.22%), Postives = 22/45 (48.89%), Query Frame = 2
Query:  677 GAALHPNLVKLIGYCLEDDTDFWCMSHASR-QLGEYLFRRGSYFP 808
            G   H NLVKL+GYC ED           +  L  +LFRR   FP
Sbjct:  145 GMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDPFP 189          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.005e-13
Identity = 56/147 (38.10%), Postives = 75/147 (51.02%), Query Frame = 1
Query:  415 PTPRSEGEIL--RSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS-------CEIDWILLGG*HRLLVYESCLEAAWRIFV*EGLLFPSSSWNLP 828
            P+PRS  ++   R  NL+ FS+ +L  AT  F    V+GEGGFG V+KG I  +  ++  P   +V+A+K+LN+ G QGH +WLAEV   G     +       C  D     G  RLLVYE     +      E  LFP  S  LP
Sbjct:   55 PSPRSIKDLYTEREQNLRVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPP---LVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGET--GIERLLVYEYMSNRSL-----EDHLFPRRSHTLP 191          
BLAST of EY729348 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.449e-12
Identity = 41/98 (41.84%), Postives = 58/98 (59.18%), Query Frame = 1
Query:  463 SFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDEHSFAATKPXTGMVIAVKRLNQDGFQGHXEWLAEVIIWGSFTSQS-CEIDWILLGG*HRLLVYE 753
            +F+F +L  AT NF PD+ LGEGGFG V+KG +D          TG V+AVK+L+++G QG+ E+L EV++       +   +      G  RLLVYE
Sbjct:   73 TFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDS---------TGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYE 161          
The following BLAST results are available for this feature:
BLAST of EY729348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
APK1A_ARATH5.779e-4553.77Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
APK1B_ARATH9.858e-4552.94Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH8.083e-3948.74Probable serine/threonine-protein kinase NAK OS=Ar... [more]
BIK1_ARATH8.656e-3349.37Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK2B_ARATH7.328e-3258.77Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK2A_ARATH8.958e-3056.41Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y3545_ARATH9.904e-2946.20Probable receptor-like protein kinase At3g55450 OS... [more]
CX32_ARATH6.070e-2636.84Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5707_ARATH2.005e-1338.10Probable receptor-like protein kinase At5g47070 OS... [more]
PBS1_ARATH6.449e-1241.84Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-G04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729348 ID=EY729348; Name=EY729348; organism=Citrus sinensis; type=EST; length=875bp
ACAAAGTTGAGACACTGTGTACAAGAAATATATTAATGTGTTGCTTTAAA
GAGGGACCAGCCCGCCATTAATGCAATTCCTCTTCACCTCCTCCTAATTT
CAAACAAACAGCTCCCCTTTCCTCCATCTCTCTCTCTTTCCCCTTCTCTT
TCTCTTTTTGTTTTTGCTTGCAAATTGAATCAAAGCAAAGCTCGAGCTTC
AGGGCTGGATTCTATAAAAGAAAACGGAGGGAGAGGGAGGAAGTTTAAGA
AAAGGCTTCTTGGTTTTCTGGAATTTGGTTTTATGGGGATTTGCTTGAGT
GCTCGAATCAAAGCTGAGAGCCCATTCAACACAGGGGTGAGTTCAAAGTA
TGTTAGCTCAGATGGGAATGATATGAGCAGCACGGGTAGTAAGGTTTCAT
CATTATCTGTTCCTCCTACTCCTAGGAGCGAGGGTGAGATCTTGCGATCC
CCTAATTTGAAGAGTTTCAGTTTTTCTGACCTCAAAACGGCCACCAGGAA
TTTTCGTCCAGATAGTGTGTTAGGAGAGGGTGGTTTTGGTTCTGTTTTTA
AAGGGTGGATTGATGAGCATTCATTCGCTGCTACCAAGCCTGNGACTGGT
ATGGTTATTGCTGTGAAAAGGCTTAACCAAGATGGTTTCCAAGGTCACAA
NGAGTGGCTGGCAGAAGTAATTATCTGGGGCAGCTTTACATCCCAATCTT
GTGAAATTGATTGGATACTGCTTGGAGGATGACACAGACTTTTGGTGTAT
GAGTCATGCCTCGAGGCAGCTTGGAGAATATTTGTTTAGGAGGGGCTCTT
ATTTCCCAGCTCTTCTTGGAACCTTCCCTGAAGGTGGTCTTGNTGCTGCT
AAGGGGGTGCCTTTCTTCATGGTGC
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