EY729344

Overview
NameEY729344
Unique NameEY729344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11281 contig Csv1_Contig11281:1..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.571e-60
Identity = 103/174 (59.20%), Postives = 122/174 (70.11%), Query Frame = 2
Query:  170 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYF 691
            MA + S   PL E++ HK+ + RA                          W +AFLCE+CFTF+W+LI N KW+P  YKTYP+RL ER+ ELPPVDMFVTTAD   EPP+I VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYNV +RAPF YF
Sbjct:    1 MAESSSPLPPLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDERVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYF 174          

HSP 2 Score: 31.9574 bits (71), Expect = 4.571e-60
Identity = 16/43 (37.21%), Postives = 21/43 (48.84%), Query Frame = 1
Query:  742 ENMKKEYEKLSPNIEHAAKRSSLFDLXXEMNCFSXTERMNHPT 870
            E  K+EYEKLS  +E A   S   D   +   F  T+  +H T
Sbjct:  191 EMTKREYEKLSQKVEDATGSSHWLDAEDDFEAFLNTKSNDHST 233          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.520e-57
Identity = 98/174 (56.32%), Postives = 123/174 (70.69%), Query Frame = 2
Query:  170 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYF 691
            MA++ SS  PL EK+ +KN + R                       +   W +AFLCES F+FIW+LI + KW+P +YK+YP+RL ER+ +LP VDMFVTTAD   EPPI+  NT+LSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+ +RAPFRYF
Sbjct:    1 MADSSSSLPPLCEKISYKNYFLRVVDLTILGFLFSLLLYRILLMNQNNSVWVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDERVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYF 174          

HSP 2 Score: 31.5722 bits (70), Expect = 4.520e-57
Identity = 17/43 (39.53%), Postives = 22/43 (51.16%), Query Frame = 1
Query:  742 ENMKKEYEKLSPNIEHAAKRSSLFDLXXEMNCFSXTERMNHPT 870
            E  K+EYEKLS  +E A   S   D   +   FS T+  +H T
Sbjct:  191 EITKREYEKLSRRVEDATGDSHWLDAEDDFEDFSNTKPNDHST 233          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.420e-55
Identity = 97/174 (55.75%), Postives = 118/174 (67.82%), Query Frame = 2
Query:  170 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYF 691
            MA++  S  PLYE + +K+   RA                      +G  W +AFLCESCF+F+W+L    KW+P   K YP RL ER+ +LP VDMFV TAD   EPPI+ VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+ +RAPFRYF
Sbjct:    1 MADSSCSLPPLYENISYKSYILRAVDLTILGLLFSLLLHRILYMSQNGIIWLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDERVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYF 174          

HSP 2 Score: 32.7278 bits (73), Expect = 1.420e-55
Identity = 17/43 (39.53%), Postives = 22/43 (51.16%), Query Frame = 1
Query:  742 ENMKKEYEKLSPNIEHAAKRSSLFDLXXEMNCFSXTERMNHPT 870
            E  K+EYEKL   +E A   S L     E+  FS T+  +H T
Sbjct:  191 EMTKREYEKLCRKVEDATGDSHLLGTDNELEAFSNTKPNDHST 233          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 4.461e-54
Identity = 97/174 (55.75%), Postives = 117/174 (67.24%), Query Frame = 2
Query:  170 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYF 691
            MA++ SS LPL E++ HK+   R                       +   W +AFLCESCF+F+W++I   KW+P   K YP RL ER+ +LP VDMFV TAD   EPPII VNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKF K+W PFCKKYNV +RAPFRYF
Sbjct:    1 MADSSSSLLPLCERISHKSYILRIVDLTILVLLFSLLWYRILHMCENNTIWLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF 174          

HSP 2 Score: 29.6462 bits (65), Expect = 4.461e-54
Identity = 15/41 (36.59%), Postives = 20/41 (48.78%), Query Frame = 1
Query:  748 MKKEYEKLSPNIEHAAKRSSLFDLXXEMNCFSXTERMNHPT 870
            MK+EY KL   +E A   S   D   +   FS T+  +H T
Sbjct:  193 MKREYVKLCRKVEDATGDSHWLDADDDFEAFSNTKPNDHST 233          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.056e-49
Identity = 91/174 (52.30%), Postives = 111/174 (63.79%), Query Frame = 2
Query:  170 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYF 691
            MA++ SS  PL E++ HK+   RA                      +   W LAF CESCF+ +W++    KW+P     Y   L ER+ +LP +DMFV TAD   E PIITVNTVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKF K+W PFCKKYNV +RAPFRYF
Sbjct:    1 MADSSSSLHPLCERISHKSYVLRAVDLTILGLLYSLLLYRILHISENDNVWLLAFFCESCFSLVWLIFTCLKWSPAEDIPYINTLNERVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF 174          

HSP 2 Score: 29.6462 bits (65), Expect = 1.056e-49
Identity = 15/41 (36.59%), Postives = 20/41 (48.78%), Query Frame = 1
Query:  748 MKKEYEKLSPNIEHAAKRSSLFDLXXEMNCFSXTERMNHPT 870
            MK+EY KL   +E A   S   D   +   FS T+  +H T
Sbjct:  193 MKREYVKLCRKVEDATGDSHWLDADDDFEAFSNTKPNDHST 233          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 4.680e-47
Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 2
Query:  329 AFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYFXXXXXXXXXXXXXXADW 742
            A  CE+ FTF+W+L VN KW+P+ + T+P+ L ERI ELP VDMFVTTAD  LEPP++TVNTVLSLLA+DYP    KLACYVSDD CSPL  Y+L EA++FA+ WVPFC+++ V +RAPFRYF               DW
Sbjct:   53 ALACEAWFTFMWLLNVNAKWSPVRFDTFPENLAERIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEFGPADGKFLEDW 192          

HSP 2 Score: 32.3426 bits (72), Expect = 4.680e-47
Identity = 20/41 (48.78%), Postives = 21/41 (51.22%), Query Frame = 1
Query:  748 MKKEYEKLSPNIEHAAKRSSLFDLXXEMNCFSXTERMNHPT 870
            MK EYEKL   IE A + S L     E   F   ER NHPT
Sbjct:  195 MKSEYEKLVHRIEDADEPSLLRHGGGEFAEFLDVERGNHPT 235          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.971e-47
Identity = 93/201 (46.27%), Postives = 118/201 (58.71%), Query Frame = 2
Query:  170 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYFXXXXXXXXXXXXXXADWKT*RKSMRNL 772
            MA++  S  PL E++ + N + RA                      +   W +AF CESCF  + +LI   KW+P   K +P RL ER+ +LP VDMFV TAD   EPPI+ V+TVLSLLAV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN  +RAP RYF               DW+  ++    L
Sbjct:    1 MADSSFSLPPLCERISYTNYFLRAVYLTVLGLFFSLLLHRIRHTSEYDNVWLVAFFCESCFFLVCLLITCLKWSPADTKPFPDRLDERVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPISVATEDYEFNRDWEKTKREYEKL 201          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 4.826e-34
Identity = 73/139 (52.52%), Postives = 92/139 (66.19%), Query Frame = 2
Query:  311 GFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRL----------QERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYF 691
            G  W +A +CE+ F  +  L V+ KW+P+ + T P+ L               ELP VDM VTTAD  LEPP++TVNTVLSLLA+DYP    +LACYVSDD CSPL  ++L EA+ FA  WVPFC++Y V +RAPFRYF
Sbjct:   80 GGVWRVALVCEAWFAALCALNVSAKWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYF 218          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.232e-34
Identity = 75/148 (50.68%), Postives = 96/148 (64.86%), Query Frame = 2
Query:  302 KNHGFA------WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRL----------QERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV--HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYF 691
            ++HG A      W +A +CE+ F  +  L V+ KW+P+ + T P+ L               ELP VDM VTTAD  LEPP++TVNTVLSLLA+DYP    +LACYVSDD CSPL  ++L EA+ FA  WVPFC++Y V +RAPFRYF
Sbjct:   71 RHHGGAGGDAGVWRVALVCEAWFAALCALNVSAKWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYF 218          
BLAST of EY729344 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.028e-32
Identity = 70/130 (53.85%), Postives = 87/130 (66.92%), Query Frame = 2
Query:  320 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVXIRAPFRYF 691
            W ++ +CE  F   WIL    KW P+  +TY  RL  R +      +L PVD+FV+T D   EPPIIT NT+LS+LAVDYPV+K++CYVSDD  S L F +L E S+FA+ WVPFCKKYNV  RAP  YF
Sbjct:  244 WLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYF 373          
The following BLAST results are available for this feature:
BLAST of EY729344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLB4_ARATH4.571e-6059.20Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB3_ARATH4.520e-5756.32Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB2_ARATH1.420e-5555.75Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLB6_ARATH4.461e-5455.75Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLB5_ARATH1.056e-4952.30Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLH1_ORYSJ4.680e-4758.57Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLB1_ARATH4.971e-4746.27Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLH2_ORYSJ4.826e-3452.52Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH2_ORYSI8.232e-3450.68Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CESA4_ARATH2.028e-3253.85Cellulose synthase A catalytic subunit 4 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-F12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729344 ID=EY729344; Name=EY729344; organism=Citrus sinensis; type=EST; length=902bp
CCACGCGTCCGCATCCTTTGATTCTTTTCGGCTAAGGATATGCGCTTCAT
CACCACATATGCAACAAATGGTCATTCTTGCAACTATAAAACCTACTAAA
TACCTTTAAAAACCCACATCTATTAATGCCGAAACACCAAAAAAAAAAAA
AAAATTGTCTTTCAAGCTCATGGCCAATACAAAGTCGTCATGTCTCCCTC
TATACGAAAAAGTTTTTCATAAAAACACATATCATAGGGCTTTAGATGTT
ATCATCTTGTTCCTTCTTCTATGTCTGCTCTTCTATCGGCTCTCAACGTT
GAAGAATCATGGATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTCTTGTT
TTACTTTCATCTGGATTCTCATCGTCAACTGCAAGTGGACTCCTTTGACC
TACAAAACATATCCCCAACGTCTCCAAGAAAGGATACAGGAGCTGCCCCC
AGTGGACATGTTTGTGACAACTGCTGATGCTGAACTCGAGCCGCCAATCA
TCACTGTAAACACAGTGCTGTCTTTGTTGGCAGTTGATTATCCAGTTCAC
AAGCTCGCTTGCTATGTTTCTGATGATGCCTGCTCACCTCTCAATTTCTA
CTCTCTTGTTGAAGCTTCTAAATTTGCTAAGCTTTGGGTTCCATTCTGTA
AAAAGTATAATGTTCANATTAGAGCTCCCTTTAGATACTTCCCAGATAGT
GAGCCGTCCGATTCCAGTTCAGGGGAACTCCTNGCAGACTGGAAAACATG
AAGAAAGAGTATGAGAAACTTAGCCCAAACATAGAACATGCAGCCAAAAG
ATCTTCTTTATTTGATCTANCANGAGAAATGAACTGTTTCTCCANTACAG
AACGCATGAATCATCCNACATAGTCANGGTATATCGGAGAACAAAGGAGG
TC
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