EY729342

Overview
NameEY729342
Unique NameEY729342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9377 contig Csv1_Contig9377:71..972. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.157e-58
Identity = 121/207 (58.45%), Postives = 139/207 (67.15%), Query Frame = 3
Query:   78 MYRNAASRLRALKGHVRCRVPXXXXXXXXXXXXXXXXXXXXXXXWLTGERXXXXXXLDFXXXXXXXXXXXXDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVKSEISEGS 698
            MYR A+SRL +LK     RV                        W+TG+       LDF            DYVEP KT+I+TL NG+K+ASE SV+P ASI LYV CGSIYE+P S+G THLLERMAF+ST NRSHLRIVRE+EAIGGNV ASASRE M Y++DALKTYVP+MVE+L DCVR P FLDWEV EQL KVK+EISE S
Sbjct:    1 MYRCASSRLSSLKARQGNRV----LTRFSSSAAVATKPSGGLFSWITGDTSSSVTPLDFPLNDVKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPAFLDWEVKEQLEKVKAEISEYS 203          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: MPPA1_ARATH (Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.130e-54
Identity = 116/205 (56.59%), Postives = 132/205 (64.39%), Query Frame = 3
Query:   78 MYRNAASRLRALKGHVRCRVPXXXXXXXXXXXXXXXXXXXXXXXWLTGERXXXXXXLDFXXXXXXXXXXXXDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVKSEISE 692
            MYR AASR RALKG V  R                         WL+G        LD             D VEP K +I+TLPNG+KIASET+ +P ASI LYV CGSIYE+P   G THLLERMAF+ST NR+H R+VRE+EAIGGN  ASASREQM Y+ DALKTYVPEMVE+LID VR P FLDWEVNE+L K+K EI+E
Sbjct:    1 MYRTAASRARALKG-VLTRSLRPARYASSSAVAETSSSTPAYLSWLSGGSRAALTSLDMPLQGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKMKVEIAE 204          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: MPPA2_ARATH (Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=At3g16480 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.266e-52
Identity = 113/208 (54.33%), Postives = 131/208 (62.98%), Query Frame = 3
Query:   78 MYRNAASRLRALKGHVRCRVPXXXXXXXXXXXXXXXXXXXXXXXWLTGERXXXXXXLDFXXXXXXXXXXXXDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVKSEISEGST 701
            MYR AASR +ALKG     +                        WL+G        ++             D+VEP K K +TLPNG+ IA+E S +P ASI LYV CGSIYE+P   G THLLERMAF+ST NRSH R+VRE+EAIGGN  ASASREQMGY+ DALKTYVPEMVE+LID VR P FLDWEVNE+L KVK EI E +T
Sbjct:    1 MYRTAASRAKALKG-----ILNHNFRASRYASSSAVATSSSSSSWLSGGYSSSLPSMNIPLAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFAT 203          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: MPPA1_DICDI (Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium discoideum GN=mppA1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.255e-18
Identity = 45/119 (37.82%), Postives = 75/119 (63.03%), Query Frame = 3
Query:  309 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQL 665
            K +ISTLPNG+++ S+ +   V +I LY+  G+ YESP   G  +LLE+M F+ T+N S   I++E+E I  N  AS+SRE +  S + L+  +  ++ +L D ++ P + + E+ EQ+
Sbjct:  143 KAEISTLPNGIRVVSKQTHEGVCAIGLYINAGTKYESPQDRGVFNLLEKMTFKETKNNSTSEIIKELEEISMNAMASSSREMINVSLEVLRKDLEFVLSILSDQIKSPTYSEEELREQI 261          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: MPPA_NEUCR (Mitochondrial-processing peptidase subunit alpha OS=Neurospora crassa GN=mpp PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.141e-18
Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 3
Query:  309 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVKSEISE 692
            +  I+TL NGV++ASE      + + +Y+  GS YE+    G +H+++R+AF+ST  R+   ++  VE +GGN+Q ++SRE M Y        +P  VEL+ + +R P   D E+  Q+   + E++E
Sbjct:   51 RDNITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTADEMLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKLTDEELEGQIMTAQYEVNE 178          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: QCR2_HUMAN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens GN=UQCRC2 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.812e-17
Identity = 46/126 (36.51%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  300 EPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVK 677
            +P   + + LPNG+ IAS  + SPV+ I L++  GS YE   + GTTHLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + L+  V  ++E L++    P F  WEV +   ++K
Sbjct:   34 QPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLK 159          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 43/134 (32.09%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  309 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVKSEISEGSTILK 710
            +T++S L NG+++ASE S  P  ++ +++  GS YES  + G  + +E +AF+ T+NR    + +EVE++G ++ A ++RE   Y   AL   +P+ VELL D V+     D ++ ++   +  E+ E  T ++
Sbjct:   47 ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMR 180          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: QCR2_MOUSE (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus GN=Uqcrc2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.175e-16
Identity = 42/127 (33.07%), Postives = 76/127 (59.84%), Query Frame = 3
Query:  297 VEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVK 677
            ++P   + + LPNG+ IAS  + +P++ I L+V  GS YE   + GT+HLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + +++ +  ++E L++    P F  WEV    +++K
Sbjct:   33 LQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLK 159          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: QCR1_RAT (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.617e-16
Identity = 43/134 (32.09%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  309 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVKSEISEGSTILK 710
            +T++S L NG+++ASE S  P  ++ +++  GS YE+  + G  + LE +AF+ T+NR    + +EVE+IG ++ A ++RE   Y   AL   +P++VELL D V+     D ++ ++   +  E+ E    ++
Sbjct:   47 ETQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERDVILREMQENDASMQ 180          
BLAST of EY729342 vs. ExPASy Swiss-Prot
Match: QCR2_RAT (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus GN=Uqcrc2 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 41/127 (32.28%), Postives = 76/127 (59.84%), Query Frame = 3
Query:  297 VEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRXPVFLDWEVNEQLTKVK 677
            ++P + + + LPNG+ IAS  + +P++ I L++  GS YE+    GT+HLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + ++  +  ++E L++    P F  WEV    +++K
Sbjct:   32 LQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLLRLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAPEFRRWEVAALRSQLK 158          
The following BLAST results are available for this feature:
BLAST of EY729342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
MPPA_SOLTU6.157e-5858.45Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA1_ARATH4.130e-5456.59Probable mitochondrial-processing peptidase subuni... [more]
MPPA2_ARATH2.266e-5254.33Probable mitochondrial-processing peptidase subuni... [more]
MPPA1_DICDI1.255e-1837.82Mitochondrial-processing peptidase subunit alpha-1... [more]
MPPA_NEUCR2.141e-1834.38Mitochondrial-processing peptidase subunit alpha O... [more]
QCR2_HUMAN1.812e-1736.51Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR1_BOVIN8.995e-1732.09Cytochrome b-c1 complex subunit 1, mitochondrial O... [more]
QCR2_MOUSE1.175e-1633.07Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR1_RAT2.617e-1632.09Cytochrome b-c1 complex subunit 1, mitochondrial O... [more]
QCR2_RAT4.464e-1632.28Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-F10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729342 ID=EY729342; Name=EY729342; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGGCCAGTCTTCAACACTTGTCCCGTTCAAATTAGGGTTTT
GGAGAATTGACTATCAAATCAATCAGCATGTACAGAAACGCAGCCTCTCG
TCTTCGAGCCCTCAAGGGCCATGTGCGTTGTAGGGTGCCTTCAGCCACAA
GATTTGCAAGTTCCAGTGCCGTTGCTTCAACTTCATCCTCTTCGGGTGGT
CTCTTTAGCTGGTTGACTGGGGAACGGTCCAGTTCTTCACCTTCTCTGGA
CTTTCCACTTCCGGGTGTCTCTCTTCCACCTTCATTGCCTGATTATGTTG
AACCTGGTAAAACCAAGATTTCTACTCTACCAAATGGTGTCAAAATTGCC
TCGGAAACATCAGTGAGTCCTGTAGCCTCAATATCGTTATATGTTGGTTG
TGGTTCAATTTATGAGTCACCAATCTCATTTGGGACAACACACTTGCTTG
AGCGTATGGCTTTTAGAAGTACAAGAAATAGGAGTCACTTGCGTATTGTG
CGAGAAGTGGAGGCAATTGGTGGCAATGTCCAAGCCTCAGCTTCTAGGGA
GCAGATGGGTTACTCCTTTGATGCTTTGAAAACTTATGTTCCTGAAATGG
TAGAGCTTCTTATTGACTGTGTGAGANNACCTGTTTTTCTGGATTGGGAG
GTCAACGAACAGCTCACAAAGGTGAAATCTGAGATTAGTGAGGGTTCAAC
AATCCTCAAANCTTGCTTTTGGAGGCAATCACTCAGCTGGTTACTCTGTG
CATTGGCTCATCTCTTCTACCCCCGGATCTGCTATAATAGATTAACTCTA
CCTTCTCGAAGAATTGTTGTGAAAATAATATGGTCTCGGATGGTATTGCT
GCTTCTGTGTGGAAATGACAGTTGGTGTTGGTACAGACCCCTTTA
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