EY729338

Overview
NameEY729338
Unique NameEY729338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY729338 vs. ExPASy Swiss-Prot
Match: TTHL_ARATH (Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.579e-52
Identity = 106/207 (51.21%), Postives = 135/207 (65.22%), Query Frame = 1 
Query:   43 CCGSTKFAKEMASASPFASLNQAVSAARHIWFNLVDVNGWLDAFSAHPQIGQSPS-------SQWSKAEQSTALATANESSSQELSDWNNRYRLRFGFIFIICASGRTAAEILAELKKRYTNRPIIEFEIAAQEQMKITEXXXXXXXXXXXXXXXXTFQYSATAKTAEEDRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLE 642
            CCGS++FAK+M+++ P  S  +A+  AR IWFN V+V  WL+AFSAHPQIG +PS       ++ S +EQSTA AT + S+ QEL++WN  Y+ +FGFIFIICASGRT AE+L  LK+RY NRPI+E EIAA EQMKITE                T   S+   T  +DR+ II GHL  + EA A      P R+R PITTHVL+
Sbjct:   13 CCGSSEFAKQMSTSGPLTS-QEAIYTARDIWFNQVNVTDWLEAFSAHPQIGNTPSPSINSDFARRSVSEQSTAFATTSASALQELAEWNVLYKKKFGFIFIICASGRTHAEMLHALKERYENRPIVELEIAAMEQMKITELRMAKLFSDKAKVISETDSSSSPVSTKPQDRLRIIGGHLNVAAEAKA------PKRSRPPITTHVLD 212

HSP 2 Score: 34.6538 bits (78), Expect = 1.579e-52
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 2 
Query:  641 NVSQGSPAAGVEVRLEMWKG 700
            +VS+G+PAAGVEV LE+W G
Sbjct:  212 DVSRGAPAAGVEVHLEVWSG 231
The following BLAST results are available for this feature:
BLAST of EY729338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TTHL_ARATH1.579e-5251.21Uric acid degradation bifunctional protein TTL OS=... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-F04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729338 ID=EY729338; Name=EY729338; organism=Citrus sinensis; type=EST; length=863bp
GAGGAGATGATGGTGGTTTTGGATGAGGAGGAGTTGTTGGGATGCTGCGG
TAGCACCAAATTTGCGAAAGAGATGGCGTCGGCCTCACCTTTTGCATCAT
TGAATCAAGCCGTCTCAGCAGCTCGACACATCTGGTTCAACCTGGTTGAT
GTAAACGGCTGGCTTGATGCATTTTCGGCTCATCCTCAGATCGGCCAATC
TCCGTCTTCACAGTGGAGCAAGGCCGAGCAGTCCACTGCTTTAGCAACTG
CTAATGAATCTAGCTCGCAGGAACTGTCCGACTGGAATAATCGGTACAGG
CTGAGATTTGGATTTATATTTATTATATGTGCATCGGGGAGGACGGCTGC
CGAAATACTTGCTGAGTTGAAGAAACGATACACAAACAGGCCCATAATTG
AGTTTGAGATTGCTGCTCAGGAGCAAATGAAAATAACTGAATTACGTCTG
GCAAAGCTCTTCTCAGCTAAAGCAAAAGCTTCTTCTGCAACTTTCCAGTA
TTCTGCAACTGCAAAAACAGCAGAAGAAGATCGTGTGAGCATCATAGAAG
GACACCTATGTGCTTCTACTGAAGCTTCAGCAGGGAAAATATCTCAAATC
CCTACAAGAACTCGACTACCAATTACAACACATGTCTTGGAATGTTTCTC
AAGGGTCTCCAGCTGCGGGTGTTGAGGTACGTTTGGAAATGTGGAAGGGC
ATCCACCACGTCCCCTCTTTGGCGAACAGATGTCAGTGGGTGGGTGTACC
AGGGTCTTCACTACAAATAAAGATGACGATGTGGTCATTGATGGCATGAT
GAAGAACTGACCCTGGATTTACAGATACTTTCACACTGGTAATACTGTCA
NAAGGATTTTCCC
back to top