EY729333

Overview
NameEY729333
Unique NameEY729333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729333 vs. ExPASy Swiss-Prot
Match: XYLX_PSEPU (Toluate 1,2-dioxygenase subunit alpha OS=Pseudomonas putida GN=xylX PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.042e-26
Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = -2
Query:    9 GXPGQFGL*GSPRPEAPGRFRKYRXLLVRSLQRDVPGTQRLXGGTRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGADGYHVSSVHWNYSATMGRRNYEAEG 332
            G P  F   GS   +   RF  YR  L  SL+ DV   +   G +R +ID +VDQ+P GLEVLRGSS+YVY+GNWK+Q+ENGADGYHVS+VHWNY+AT  +R     G
Sbjct:  135 GYPDSFDCDGSHDLKKVARFASYRGFLFGSLREDVAPLEEFLGESRKVIDMVVDQSPEGLEVLRGSSTYVYEGNWKVQVENGADGYHVSTVHWNYAATQQQRKLRDAG 242          
BLAST of EY729333 vs. ExPASy Swiss-Prot
Match: CBDA_BURCE (2-halobenzoate 1,2-dioxygenase large subunit OS=Burkholderia cepacia GN=cbdA PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.505e-25
Identity = 58/108 (53.70%), Postives = 71/108 (65.74%), Query Frame = -2
Query:    3 PGQFGL*GSPRPEAPGRFRKYRXLLVRSLQRDVPGTQRLXGGTRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGADGYHVSSVHWNYSATMGRRNYEAEGTR 326
            P  F + GS        F  YR  L  S+  D    +   GG++ I+DQ++DQ P  LEVLRGSSSY+YDGNWKLQIENGADGYHV SVHWNY AT+GRR+  ++  R
Sbjct:  143 PEGFNVDGSHDLTRIPSFANYRGFLFGSMNPDACPIEEHLGGSKAILDQVIDQTPGELEVLRGSSSYIYDGNWKLQIENGADGYHVGSVHWNYVATIGRRDRTSDTIR 250          
BLAST of EY729333 vs. ExPASy Swiss-Prot
Match: BENA_ACIAD (Benzoate 1,2-dioxygenase subunit alpha OS=Acinetobacter sp. (strain ADP1) GN=benA PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 53/99 (53.54%), Postives = 62/99 (62.63%), Query Frame = -2
Query:    9 GSPRPEAPGRFRKYRXLLVRSLQRDVPGTQRLXGGTRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGADGYHVSSVHWNYSATMGRRNYEAEG 305
            GS   +   RF  Y+  L  SL  DVP  Q   G T  IID +V Q+  GLEVLRG S+Y Y+GNWKL  ENGADGYHVS+VHWNY+AT   R  +  G
Sbjct:  147 GSHDLKKVARFESYKGFLFGSLNPDVPSLQEFLGETTKIIDMIVGQSDQGLEVLRGVSTYTYEGNWKLTAENGADGYHVSAVHWNYAATTQHRKEKQAG 245          
The following BLAST results are available for this feature:
BLAST of EY729333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
XYLX_PSEPU1.042e-2653.70Toluate 1,2-dioxygenase subunit alpha OS=Pseudomon... [more]
CBDA_BURCE1.505e-2553.702-halobenzoate 1,2-dioxygenase large subunit OS=Bu... [more]
BENA_ACIAD1.557e-2253.54Benzoate 1,2-dioxygenase subunit alpha OS=Acinetob... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-E09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729333 ID=EY729333; Name=EY729333; organism=Citrus sinensis; type=EST; length=798bp
GTGCGCGTGCCTTCGGCTTCGTAGTTGCGGCGGCCCATGGTCGCCGAGTA
ATTCCAGTGCACGGAGCTGACGTGATAACCGTCGGCGCCGTTTTCGATCT
GCAGCTTCCAGTTGCCGTCATACACATACGACGAACTGCCCCGCAGCACT
TCCAGGCCCAGCGGTGCCTGGTCCACCATCTGGTCGATGATCACCCGGGT
TCCCCCANGTAGTCGCTGAGTTCCCGGCACGTCTCGCTGAAGGCTGCGAA
CAAGAAGNNCGCGATATTTTCGAAACCGGCCAGGCGCTTCAGGTCGTGGG
GAACCTCACAGTCCAAACTGTCCGGGTANGCCCCGTCTTTGGCATCCTCA
CTTTGAGCACCTTGCGGGTTTCTAAAAGTCCANCCTTGGAAAGGGCAGGT
AACAAACTTTGTTGCTTTGTTAAAGGGGGGAAAATTTGGCCCCGGGGGGC
CCGGTTTAACAAACCGGAAACGTGCTTTTTTTTTCGGGTGAAACCACGGG
TGGGGGCATCCCGTGTGAAAAATACTTAATATTGGCCCCGTTTATTTTCC
CCTAAAACCACTGCGCCTAAAAGGGTTCCTTCCCCGGGAAAAGGGGGGGG
GCGGAAAATTTTTCGGGGGACAAAAACACCCGGGGGGGGGTTCTTTTAAA
GAGTTCCCAATTTTGGGGGAAAGGCAAAGTGTTGTTATGTGGGGGGCCCC
CCGTTGTTTTTTTTGCGCCCCCCCTCTTTTGTTTCCCCCCCCCCAAAACC
GGGGGGGAAGACGCTACCCCCGCGCAACCCACCTCCTCTTTGGAAGGG
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