EY729284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_ARATH (DNA helicase INO80 complex homolog 1 OS=Arabidopsis thaliana GN=INO80 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 4.343e-30 Identity = 68/83 (81.93%), Postives = 72/83 (86.75%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFMKV-IGIHIGLQGMDRAHRLGQTR 793 DYMNYRKY+YLRLDGSSTIMDRRDMVRDFQHRSD VFLLSTRAGGLGINLTAADTVIF + + LQ MDRAHRLGQT+ Sbjct: 1240 DYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1322 HSP 2 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 3 Query: 39 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEVFI 155 DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE ++ Sbjct: 1204 DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYM 1242
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_HUMAN (Putative DNA helicase INO80 complex homolog 1 OS=Homo sapiens GN=INO80 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 5.142e-23 Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +YM YRK+ Y+RLDGSS I +RRDMV DFQ+R+D VFLLSTRAGGLGINLTAADTVIF + Q MDRAHRLGQT+ + Sbjct: 1135 EYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1219
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_MOUSE (Putative DNA helicase INO80 complex homolog 1 OS=Mus musculus GN=Ino80 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.145e-22 Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +YM YRK+ Y+RLDGSS I +RRDMV DFQ R+D VFLLSTRAGGLGINLTAADTVIF + Q MDRAHRLGQT+ + Sbjct: 1138 EYMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1222
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_EMENI (Putative DNA helicase ino80 OS=Emericella nidulans GN=ino80 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.333e-22 Identity = 56/85 (65.88%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +Y+ YR Y+Y RLDGS+ + DRRD V DFQ R D VFLLSTRAGGLGINLTAADTVIF I Q MDRAHRLGQTR + Sbjct: 1355 EYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1439
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_DROME (Putative DNA helicase Ino80 OS=Drosophila melanogaster GN=Ino80 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.333e-22 Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +YM +RK+RY+RLDGSS I RRDMV DFQ R+D VFLLSTRAGGLGINLTAADTVIF + Q MDRAHRLGQT+ + Sbjct: 1190 EYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV 1274
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_ASPCL (Putative DNA helicase ino80 OS=Aspergillus clavatus GN=ino80 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.333e-22 Identity = 56/85 (65.88%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +Y+ YR Y+Y RLDGS+ + DRRD V DFQ R D VFLLSTRAGGLGINLTAADTVIF I Q MDRAHRLGQTR + Sbjct: 1453 EYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1537
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_SCLS1 (Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.697e-22 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +Y+ YR Y+YLRLDGS+ + DRRD V DFQ R + +FLLSTRAGGLGINLT+ADTVIF I Q MDRAHRLGQTR + Sbjct: 1456 EYLTYRNYKYLRLDGSTKLEDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1540
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_NEOFI (Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.697e-22 Identity = 55/85 (64.71%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +Y+ YR Y+Y RLDGS+ + DRRD V DFQ R + VFLLSTRAGGLGINLTAADTVIF I Q MDRAHRLGQTR + Sbjct: 1452 EYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1536
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_ASPTN (Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ino80 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.697e-22 Identity = 55/85 (64.71%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +Y+ YR Y+Y RLDGS+ + DRRD V DFQ R + VFLLSTRAGGLGINLTAADTVIF I Q MDRAHRLGQTR + Sbjct: 1433 EYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1517
BLAST of EY729284 vs. ExPASy Swiss-Prot
Match: INO80_ASPOR (Putative DNA helicase ino80 OS=Aspergillus oryzae GN=ino80 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.697e-22 Identity = 55/85 (64.71%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 548 DYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDXXVFLLSTRAGGLGINLTAADTVIFM-KVIGIHIGLQGMDRAHRLGQTRML 799 +Y+ YR Y+Y RLDGS+ + DRRD V DFQ R + VFLLSTRAGGLGINLTAADTVIF I Q MDRAHRLGQTR + Sbjct: 1250 EYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1334 The following BLAST results are available for this feature:
BLAST of EY729284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729284 ID=EY729284; Name=EY729284; organism=Citrus sinensis; type=EST; length=918bpback to top |