EY729280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.327e-41 Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 2 Query: 284 SDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKIFKS 796 S+ VL S + YN DF + + ++IKSYSEDDIH+ IKY++W ST +GNK+LDA + K P++L FSVNGSG F G+AEM VD+N W DKW G F V+W +KDVPN+ LRHI NNENKPVT+SRDT E+ L++ ++LKI S Sbjct: 383 SEPHPVLEKLRSINNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG-------PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIAS 546
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 9.327e-41 Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 2 Query: 284 SDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKIFKS 796 S+ VL S + YN DF + + ++IKSYSEDDIH+ IKY++W ST +GNK+LDA + K P++L FSVNGSG F G+AEM VD+N W DKW G F V+W +KDVPN+ LRHI NNENKPVT+SRDT E+ L++ ++LKI S Sbjct: 383 SEPHPVLEKLRSINNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG-------PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIAS 546
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.327e-41 Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 2 Query: 284 SDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKIFKS 796 S+ VL S + YN DF + + ++IKSYSEDDIH+ IKY++W ST +GNK+LDA + K P++L FSVNGSG F G+AEM VD+N W DKW G F V+W +KDVPN+ LRHI NNENKPVT+SRDT E+ L++ ++LKI S Sbjct: 384 SEPHPVLEKLRSINNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG-------PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIAS 547
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.896e-40 Identity = 83/174 (47.70%), Postives = 107/174 (61.49%), Query Frame = 2 Query: 266 SASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKI 787 SAS + VL + + YN DF + + ++IKSYSEDDIH+ IKY +W ST +GNK+LDA + K P++L FSVNGSG F G+AEM VD+N W DKW G F VKW +KDVPN LRHI NN+NKPVT+SRDT E+ L++ ++LKI Sbjct: 383 SASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG-------PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKI 549
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 7.896e-40 Identity = 83/174 (47.70%), Postives = 107/174 (61.49%), Query Frame = 2 Query: 266 SASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKI 787 SAS + VL + + YN DF + + ++IKSYSEDDIH+ IKY +W ST +GNK+LDA + K P++L FSVNGSG F G+AEM VD+N W DKW G F VKW +KDVPN LRHI NN+NKPVT+SRDT E+ L++ ++LKI Sbjct: 383 SASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG-------PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKI 549
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.896e-40 Identity = 83/174 (47.70%), Postives = 107/174 (61.49%), Query Frame = 2 Query: 266 SASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKI 787 SAS + VL + + YN DF + + ++IKSYSEDDIH+ IKY +W ST +GNK+LDA + K P++L FSVNGSG F G+AEM VD+N W DKW G F VKW +KDVPN LRHI NN+NKPVT+SRDT E+ L++ ++LKI Sbjct: 383 SASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG-------PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKI 549
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.347e-39 Identity = 86/199 (43.22%), Postives = 117/199 (58.79%), Query Frame = 2 Query: 200 FSRAGGLGMPTELIRGPRAENKSASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKIFKS 796 F ++GG G + G N + S+E VL + YN +F+ + + ++IKSYSEDDIH+ IKY +W ST +GNK+LD+ F +K P++L FSVNGSG F G+AEM VD+ W DKW G F V+W +KDVPN LRHI NN+NKPVT+SRDT E+ L++ ++LKI S Sbjct: 338 FGQSGGAGSDSNS-PGNVQPNSAPSVE---SHPVLEKLKAAHSYNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKG-------PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIISS 525
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.759e-39 Identity = 85/199 (42.71%), Postives = 114/199 (57.29%), Query Frame = 2 Query: 200 FSRAGGLGMPTELIRGPRAENKSASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKIFKS 796 F ++GG + + G + S+E VL + YN +F + + ++IKSYSEDDIH+ IKY +W ST +GNK+LD F +K P++L FSVNGSG F G+AEM VD+ W DKW G F VKW +KDVPN LRHI NN+NKPVT+SRDT E+ L++ ++LKI S Sbjct: 338 FGQSGGANSDSNSV-GNAQPTSAPSVE---SHPVLEKLKAAHSYNPKEFDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKG-------PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIAS 525
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YD374_YEAST (YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.425e-22 Identity = 53/147 (36.05%), Postives = 86/147 (58.50%), Query Frame = 2 Query: 359 EKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLD-KWNGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKIFKS 796 E ++F+VIKS S + + +WSST GNK+L + + + A +FLFFS+N SG+F G+AEM+ + + D W+ + K+ F V+W +++D+ N L+ +NE KP+THSRDT EI G+ ++ +FK+ Sbjct: 153 ENSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAK-------VFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKT 292
BLAST of EY729280 vs. ExPASy Swiss-Prot
Match: YTDC1_HUMAN (YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 63/223 (28.25%), Postives = 102/223 (45.74%), Query Frame = 2 Query: 152 NGRMWNGNDRYKSRDKFSRAGGLGMPTELIRGPRAENKSASLEISDKK-EVLSPTVS---RDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNXDMDFWQLDKW------NGFFPVKWHVIKDVPNTLLRHITP*NNENKPVTHSRDTXEIGLKQGLKMLKIF 790 +G +G+D K K RA G+ + ++ + S S S+KK E LS +V +DQ + + ++ A+F++IKS + +++ VWS+ P KKL+ F A + + L FSV SG+F G A + + W L G F + W +++P T H+T NE+KPV RD EI L+ G ++ +F Sbjct: 287 SGSGTDGSDEKKKERK--RARGI---SPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQ--DARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS----------VILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLF 492 The following BLAST results are available for this feature:
BLAST of EY729280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729280 ID=EY729280; Name=EY729280; organism=Citrus sinensis; type=EST; length=916bpback to top |