EY729211

Overview
NameEY729211
Unique NameEY729211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length284
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729211 vs. ExPASy Swiss-Prot
Match: AAM1_RHOSH (Putative glycosidase (Fragment) OS=Rhodobacter sphaeroides GN=aam1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 8.988e-33
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = 3
Query:    3 PHTKPLPFWQWLIAEVHARHPDVLFLSEAFTRPKMMYRLAKVGFTQSYTYFTWRNDKGELQAYLQEVSQPPAADFFRPHFFVNTPDINPAFLQ 281
            PHTKP PFW+W+I EV ++HPDV+FL+EAFTRPK+M RL KVG+ QSY+YFTWRN K EL  YL E++      + RP+FF NTPDINP +LQ
Sbjct:  463 PHTKPFPFWEWMIGEVQSQHPDVIFLAEAFTRPKVMKRLGKVGYGQSYSYFTWRNTKAELIDYLTELTTEECRHYMRPNFFANTPDINPVYLQ 555          
BLAST of EY729211 vs. ExPASy Swiss-Prot
Match: PEP1B_STRCO (Putative glucanohydrolase pep1B OS=Streptomyces coelicolor GN=pep1B PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.137e-27
Identity = 57/93 (61.29%), Postives = 72/93 (77.42%), Query Frame = 3
Query:    3 PHTKPLPFWQWLIAEVHARHPDVLFLSEAFTRPKMMYRLAKVGFTQSYTYFTWRNDKGELQAYLQEVSQPPAADFFRPHFFVNTPDINPAFLQ 281
            PHTKP+ FW+ +IA+++   PDV+FL+EAFTRP MM  LA++GF QSYTYFTWRN K EL  YL+E+S   AA + RP+FF NTPDI  A+LQ
Sbjct:  387 PHTKPVAFWERVIADINGTDPDVIFLAEAFTRPAMMATLAQIGFQQSYTYFTWRNTKQELTEYLEELSGEAAA-YMRPNFFANTPDILHAYLQ 478          
BLAST of EY729211 vs. ExPASy Swiss-Prot
Match: PEP1A_STRCO (Putative glucanohydrolase pep1A OS=Streptomyces coelicolor GN=pep1A PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.939e-27
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 3
Query:    3 PHTKPLPFWQWLIAEVHARHPDVLFLSEAFTRPKMMYRLAKVGFTQSYTYFTWRNDKGELQAYLQEVSQPPAADFFRPHFFVNTPDINPAFLQ 281
            PHTKP+ FW+ +IA+++   PDV+FL+EAFTRP MM  LA++GF QSYTYFTWRN K EL  YL E+S   AA + RP+FF NTPDI  A+LQ
Sbjct:  396 PHTKPVAFWERVIADINGTDPDVIFLAEAFTRPAMMATLAQIGFQQSYTYFTWRNTKQELTEYLTELS-GEAASYMRPNFFANTPDILHAYLQ 487          
BLAST of EY729211 vs. ExPASy Swiss-Prot
Match: GLGE_MYCS2 (Putative glucanase glgE OS=Mycobacterium smegmatis GN=glgE PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.390e-25
Identity = 57/93 (61.29%), Postives = 67/93 (72.04%), Query Frame = 3
Query:    3 PHTKPLPFWQWLIAEVHARHPDVLFLSEAFTRPKMMYRLAKVGFTQSYTYFTWRNDKGELQAYLQEVSQPPAADFFRPHFFVNTPDINPAFLQ 281
            PHTKP  FW WLIAEV    PD+LFLSEAFTRP  +Y LAK+GFTQSYTYFTWR  K EL  + +E+++   AD  RP+ +VNTPDI    LQ
Sbjct:  416 PHTKPPNFWAWLIAEVKNEDPDILFLSEAFTRPARLYGLAKLGFTQSYTYFTWRTAKWELTEFGEEIAK--YADHARPNLWVNTPDILHESLQ 506          
BLAST of EY729211 vs. ExPASy Swiss-Prot
Match: GLGE_MYCTU (Putative glucanase glgE OS=Mycobacterium tuberculosis GN=glgE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 3
Query:    3 PHTKPLPFWQWLIAEVHARHPDVLFLSEAFTRPKMMYRLAKVGFTQSYTYFTWRNDKGELQAYLQEVSQPPAADFFRPHFFVNTPDINPAFLQ 281
            PHTKP  FW WLIA+V    PDVLFLSEAFT P   Y LAK+GFTQSY+YFTWR  K EL  +  ++++   AD+ RP+ FVNTPDI  A LQ
Sbjct:  420 PHTKPPNFWAWLIAQVKTVDPDVLFLSEAFTPPARQYGLAKLGFTQSYSYFTWRTTKWELTEFGNQIAE--LADYRRPNLFVNTPDILHAVLQ 510          
BLAST of EY729211 vs. ExPASy Swiss-Prot
Match: GLGE_MYCBO (Putative glucanase glgE OS=Mycobacterium bovis GN=glgE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 3
Query:    3 PHTKPLPFWQWLIAEVHARHPDVLFLSEAFTRPKMMYRLAKVGFTQSYTYFTWRNDKGELQAYLQEVSQPPAADFFRPHFFVNTPDINPAFLQ 281
            PHTKP  FW WLIA+V    PDVLFLSEAFT P   Y LAK+GFTQSY+YFTWR  K EL  +  ++++   AD+ RP+ FVNTPDI  A LQ
Sbjct:  420 PHTKPPNFWAWLIAQVKTVDPDVLFLSEAFTPPARQYGLAKLGFTQSYSYFTWRTTKWELTEFGNQIAE--LADYRRPNLFVNTPDILHAVLQ 510          
The following BLAST results are available for this feature:
BLAST of EY729211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AAM1_RHOSH8.988e-3363.44Putative glycosidase (Fragment) OS=Rhodobacter sph... [more]
PEP1B_STRCO1.137e-2761.29Putative glucanohydrolase pep1B OS=Streptomyces co... [more]
PEP1A_STRCO1.939e-2761.29Putative glucanohydrolase pep1A OS=Streptomyces co... [more]
GLGE_MYCS21.390e-2561.29Putative glucanase glgE OS=Mycobacterium smegmatis... [more]
GLGE_MYCTU4.044e-2560.22Putative glucanase glgE OS=Mycobacterium tuberculo... [more]
GLGE_MYCBO4.044e-2560.22Putative glucanase glgE OS=Mycobacterium bovis GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729211 ID=EY729211; Name=EY729211; organism=Citrus sinensis; type=EST; length=284bp
ATCCGCACACCAAGCCGCTGCCGTTCTGGCAATGGCTGATCGCCGAGGTG
CACGCGCGCCACCCGGACGTGCTGTTCCTGTCCGAGGCCTTCACCCGTCC
CAAGATGATGTACCGGCTGGCGAAAGTGGGCTTCACGCAGTCGTACACCT
ACTTCACCTGGCGCAACGACAAGGGCGAGCTGCAAGCCTATCTGCAGGAG
GTCTCGCAGCCGCCGGCCGCCGATTTCTTCCGGCCGCACTTCTTCGTCAA
CACGCCGGACATCAACCCCGCGTTCCTGCAGACC
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