EY729183

Overview
NameEY729183
Unique NameEY729183
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11815 contig Csv1_Contig11815:1..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.509e-34
Identity = 88/210 (41.90%), Postives = 119/210 (56.67%), Query Frame = 2
Query:  164 TRSQRHQSTCRFIRL-SFCNPQTSGNSRTFATMAAAGAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGKR 790
            T +QR +S CR  R+        +G+   F  +  AG               VITL+RPKALNA+ L+M       L +W+ D     V+I+G+G +AFCAG DI+ + AE  K  N  L    F  EY L   I  Y+KPY+ L++G+TMG G+G+S HG++R+ TEKTL AMPE GIGLFPDVG  Y   +    G +G +L +TG R
Sbjct:    7 TSAQRLRSVCRLQRIHGHMMSSKAGSEVLFEKVGKAG---------------VITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAI-AEAGKAGNL-LSQVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPDVGGGYFLPR--LQGKLGLFLALTGFR 197          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.476e-33
Identity = 81/159 (50.94%), Postives = 98/159 (61.64%), Query Frame = 2
Query:  317 VITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVV-AEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGKR 790
            VITL+RPKALNA+NL M       L  WE DP    V+I+G G +AFCAG DI+ V  A    DR   L    F  EY L   I  YKKPY+ L+DG+TMG G+G+S HG +R+ +E TL AMPE  IGLFPDVG  Y   + P  G +G YL +TG R
Sbjct:   47 VITLNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAVTDAGKAGDR---LAQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLP--GKLGLYLALTGFR 200          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.229e-32
Identity = 75/158 (47.47%), Postives = 105/158 (66.46%), Query Frame = 2
Query:  317 VITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGKR 790
            VITL+RPK LNA++L+M  +    L  WE DP    ++I+G+G +AFCAG DIK + +E +K R   L   +F  EY L   I+  +KPY+ L+DG+TMG G+G+S HG++R+ TE++L AMPE GIGLFPDVG  Y   +    G +G +L +TG R
Sbjct:   47 VITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKAL-SEAKKARQN-LTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPR--LQGKLGYFLALTGYR 200          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.096e-32
Identity = 79/159 (49.69%), Postives = 99/159 (62.26%), Query Frame = 2
Query:  317 VITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVV-AEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGKR 790
            VITL+RPKALNA+NL M  +    L  WE DP    V+I+G+G +AFCAG DI+ V  A    DR   L    F  EY L   I   KKPY+ ++DG+TMG G+G+S HG +R+ +EKTL AMPE  IGLFPDVG  Y   +    G +G YL +TG R
Sbjct:   47 VITLNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAVTDAGKVGDR---LAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPR--LTGKLGLYLALTGFR 200          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.737e-32
Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 2
Query:  317 VITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGKR 790
            VITL+RPK LNA++L+M  +    L +WE DP    ++I+G+G +AFCAG DIK + +E +K   T L   +F  EY L   I+  +KPY+ L+DG+TMG G+G+S HG++R+ TE++L AMPE GIGLFPDVG  Y   +    G +G +L +TG R
Sbjct:   47 VITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKAL-SEAKKAGQT-LSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPR--LQGKLGYFLALTGFR 200          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31
Identity = 72/158 (45.57%), Postives = 102/158 (64.56%), Query Frame = 2
Query:  317 VITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGKR 790
            VITL+RPK LNA+ L+M  +    L +WE DP    ++I+G+G +AFCAG DI+ V++E +K +   + P  F  EY L   +   +KPY+ L+ G+TMG G+G+S HG++R+ TEK L AMPE  IGLFPDVG  Y   +    G +G +L +TG R
Sbjct:   48 VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIR-VISEAEKAKQK-IAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPR--LQGKLGYFLALTGFR 201          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.774e-31
Identity = 71/161 (44.10%), Postives = 99/161 (61.49%), Query Frame = 2
Query:  308 GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGKR 790
            G  +ITL+RPK LNA++  M  +    +  WE DP    ++I+G+G +AFCAG D++ + A+  K  +T +    F  EY L   I   KKPY+ L+DG+TMG G+G+S HG +R+ TEKT+ AMPE  IGLFPDVG  Y   +    G +G  L +TG R
Sbjct:   44 GAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVRAI-ADAGKAGDT-MTRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPR--LSGKIGHLLALTGFR 200          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.962e-30
Identity = 68/158 (43.04%), Postives = 101/158 (63.92%), Query Frame = 2
Query:  317 VITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGKR 790
            VITL+RP+ LN + L M  +  + L +WE DP+   ++I+G+G +AFCAG DI+ +     ++ N  ++  +F  EY L   I   +KPYI L+ G+TMG G+G+S HG++R+ TEK++ AMPE  IGLFPDVG  Y   +    G +G +L +TG R
Sbjct:   48 VITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEA--RNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPR--LQGKLGYFLALTGFR 201          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.455e-25
Identity = 67/161 (41.61%), Postives = 92/161 (57.14%), Query Frame = 2
Query:  305 NGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIXXKGPXGGSVGAYLGMTGK 787
            NG  + TL+RPK LNA+N+DM       L   E     K ++++G+G R+F +G DIK     IQ D   P V   F  EY L   ++ Y+KP + LM+G+TMG G G++ H  +RI  E T+ AMPE GIG F DV  S+   + P  G  G YLG+T +
Sbjct:   64 NGARIFTLNRPKVLNAINVDMIDSILPKLVSLEESNLAKVIILKGNG-RSFSSGGDIKAAALSIQ-DGKLPEVRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYFTDVAASFFFSRLP--GYFGTYLGLTSQ 220          
BLAST of EY729183 vs. ExPASy Swiss-Prot
Match: HIBCH_YEAST (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces cerevisiae GN=EHD3 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.583e-24
Identity = 67/162 (41.36%), Postives = 91/162 (56.17%), Query Frame = 2
Query:  317 VITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSG-PRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIXLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY----IXXKGPXGGSVGAYLGMTGK 787
            VITL+RPK LNA+N +M       L+E+        V+++ S  PR+FCAG D+   VA    ++      K FT EYSL  +I+ Y KP +  MDG+TMG G+G+S H  +RI TE T  AMPE  IG FPDVG ++    I         +  YL +TG+
Sbjct:   49 VITLNRPKKLNALNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDV-ATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFPDVGSTFALPRIVTLANSNSQMALYLCLTGE 209          
The following BLAST results are available for this feature:
BLAST of EY729183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
HIBCH_DANRE8.509e-3441.903-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENTR2.476e-3350.943-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_MOUSE1.229e-3247.473-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENLA2.096e-3249.693-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_RAT2.737e-3247.473-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_HUMAN1.040e-3145.573-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_CHICK1.774e-3144.103-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_BOVIN1.962e-3043.043-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_SCHPO1.455e-2541.613-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_YEAST3.583e-2441.363-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-E11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729183 ID=EY729183; Name=EY729183; organism=Citrus sinensis; type=EST; length=925bp
CCACGCGTCCGCGGGCAATCAACAGTCAACGGCAACCAAAACTATCATTT
ACTCAGGGAGTAACAGTTTCACAAAATTTAACATGCGAAGCTTATCACTC
TCACTCTCAGTCTCCCAAATCTTTACCAAATCATCAACTCTACTCTTTAA
CCAAACGACAATCACTCGCTCTCAACGACACCAATCAACGTGTCGTTTCA
TCAGATTATCTTTCTGCAATCCACAAACCTCTGGTAATTCCAGAACGTTT
GCGACCATGGCTGCAGCCGGCGCCGAAGAGTTCGTCAAAGGAAATGTTCA
TCCAAACGGCGTCGCTGTCATCACTCTGGATCGTCCCAAAGCTCTCAACG
CCATGAATCTAGATATGGACATAAAATACAAAAGTTTTCTTGACGAATGG
GAATCAGATCCAAGGGTAAAGTGTGTGCTCATTGAGGGCAGTGGGCCCCG
TGCCTTCTGTGCTGGAATGGACATCAAGGGGGTTGTTGCTGAAATTCAAA
AAGACAGGAACACACCTCTTGTACCAAAGGTGTTCACTGCAGAGTATTCT
CTAATATGCAAAATTTCTGAGTACAAGAAACCATACATAAGNCTTATGGA
TGGTGTAACAATGGGTTTTGGAATCGGCATATCCGGTCATGGTCGCTACA
GAATTGTAACAGAGAAAACTCTTCTAGCCATGCCAGAAAATGGAATTGGC
TTGTTCCCGGATGTTGGATTTTCATACATANCANCAAAAGGTCCTGNAGG
AGGATCTGTTGGTGCTTATCTTGGTATGACGGGGAAGAGAAATTCACACC
TTCTGATGCACTCTTTGCTGGACTTGGAACGGGATATGTGCATCGGGGGA
ATTAGGTTCCTGAAGGAGGCCTTTTGGCAGTTACTTTTCCGAAGATCGCA
TCAGGATATGTAGCACTTTTGGCAA
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