EY729173

Overview
NameEY729173
Unique NameEY729173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.376e-19
Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 2
Query:  317 VITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVVAEIHKDRNTPLVSEVCVAE-YSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            VITL+RP+ALNAL L M       L +W+     + V+I G+G +AFCAG DI+ + AE  K  N  L+S+V   E Y L   I  YQ  Y++L++G+TMG G+G+S H ++R+ TEKTL ++P
Sbjct:   44 VITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAI-AEAGKAGN--LLSQVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMP 164          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.675e-18
Identity = 52/123 (42.28%), Postives = 77/123 (62.60%), Query Frame = 2
Query:  317 VITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVVAEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            VITL+RP+ LNAL+L M  +    L  WE  P    ++I G+G +AFCAG DIK  ++E  K R   L  ++   EY L   I   Q  Y++L+DG+TMG G+G+S H ++R+ TE++L ++P
Sbjct:   47 VITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIK-ALSEAKKARQN-LTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMP 167          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.858e-18
Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 2
Query:  317 VITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVVAEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            VITL+RP+ LNAL+L M  +    L +WE  P    ++I G+G +AFCAG DIK  ++E  K   T L  ++   EY L   I   Q  Y++L+DG+TMG G+G+S H ++R+ TE++L ++P
Sbjct:   47 VITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIK-ALSEAKKAGQT-LSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMP 167          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.367e-18
Identity = 55/124 (44.35%), Postives = 73/124 (58.87%), Query Frame = 2
Query:  317 VITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVV-AEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            VITL+RP+ALNALNL M       L  WE  P    V+I G G +AFCAG DI+ V  A    DR   L  +    EY L   I  Y+  Y++L+DG+TMG G+G+S H  +R+ +E TL ++P
Sbjct:   47 VITLNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAVTDAGKAGDR---LAQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMP 167          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.086e-17
Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  317 VITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVV-AEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            VITL+RP+ALNALNL M  +    L  WE  P    V+I G+G +AFCAG DI+ V  A    DR   L  +    EY L   I   +  Y++++DG+TMG G+G+S H  +R+ +EKTL ++P
Sbjct:   47 VITLNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAVTDAGKVGDR---LAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMP 167          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.852e-17
Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 2
Query:  251 ANMGAAGAEEFVKRNVHPNGVAVITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVVAEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            +N   A AE  ++R        VITL+RP+ LN L L M  +  + L +WE  P    ++I G+G +AFCAG DI+ +     ++ N  ++ ++   EY L   I   Q  YI+L+ G+TMG G+G+S H ++R+ TEK++ ++P
Sbjct:   29 SNHTDAAAEVLLERK---GCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEA--RNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMP 168          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.419e-17
Identity = 47/126 (37.30%), Postives = 76/126 (60.32%), Query Frame = 2
Query:  308 GVAVITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVVAEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            G  +ITL+RP+ LNAL+  M  +    +  WE  P    ++I G+G +AFCAG D++  +A+  K  +T +  +    EY L   I   +  Y++L+DG+TMG G+G+S H  +R+ TEKT+ ++P
Sbjct:   44 GAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVR-AIADAGKAGDT-MTRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMP 167          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.039e-17
Identity = 49/123 (39.84%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  317 VITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVVAEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            VITL+RP+ LNAL L M  +    L +WE  P    ++I G+G +AFCAG DI+ V++E  K +   +       EY L   +   Q  Y++L+ G+TMG G+G+S H ++R+ TEK L ++P
Sbjct:   48 VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIR-VISEAEKAKQ-KIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMP 168          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 2
Query:  305 NGVAVITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGARAFCAGMDIKGVVAEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            NG  + TL+RP+ LNA+N+ M       L   E     + +++ G+G R+F +G DIK     I +D   P V      EY L   +  YQ   ++LM+G+TMG G G++ H  +RI  E T+ ++P
Sbjct:   64 NGARIFTLNRPKVLNAINVDMIDSILPKLVSLEESNLAKVIILKGNG-RSFSSGGDIKAAALSI-QDGKLPEVRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMP 188          
BLAST of EY729173 vs. ExPASy Swiss-Prot
Match: HIBCH_YEAST (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces cerevisiae GN=EHD3 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 2
Query:  317 VITLDRPQALNALNLYMDVKYKSFLDEWESYPPVECVLIDGSGA-RAFCAGMDIKGVVAEIHKDRNTPLVSEVCVAEYSLLCKIXEYQTTYISLMDGVTMGCGIGISGHCRYRIVTEKTLLSLP 685
            VITL+RP+ LNALN  M       L+E+        V++  S   R+FCAG D+   VA  + ++      +    EYSL  +I  Y    ++ MDG+TMG G+G+S H  +RI TE T  ++P
Sbjct:   49 VITLNRPKKLNALNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDV-ATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMP 171          
The following BLAST results are available for this feature:
BLAST of EY729173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HIBCH_DANRE3.376e-1945.163-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_MOUSE1.675e-1842.283-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_RAT2.858e-1842.283-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENTR6.367e-1844.353-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENLA1.086e-1743.553-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_BOVIN1.852e-1735.863-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_CHICK2.419e-1737.303-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_HUMAN7.039e-1739.843-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_SCHPO6.167e-1334.653-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_YEAST8.054e-1337.103-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-E01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729173 ID=EY729173; Name=EY729173; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGCGGGCAATCAACAGTCAACGGCAACCAAAACTATCATTT
ACTCAGGGAGTAACAGTTTCACAAAATTTAACATGCGAAGCTTATCACTC
TCACTCTCAGTCTCCCAAATCTTTAACAAATCATCAACTCTACTCTTTAA
CCCAACGAAAATCACTCGCTCTCCACGAAACCCATCAACGTGTTGTTTCA
TCAGAATATCTTTCTGCGATCCACAAAACTCTGGTTATTCCCCAACGTTT
GCGAACATGGGTGCAGCCGGCGCCGAAGAGTTCGTCAAAAGAAATGTGCA
TCCAAACGGGGTCGCTGTCATCACTCTGGATCGTCCCCAAGCTCTCAACG
CCCTGAATCTATATATGGACGTAAAATACAAAAGTTTTCTTGACGAATGG
GAGTCATATCCACCGGTGGAGTGTGTGCTCATTGATGGCAGTGGGGCCCG
CGCCTTCTGTGCTGGAATGGACATCAAGGGGGTTGTTGCTGAAATTCATA
AAGACAGGAACACACCTCTTGTATCAGAGGTGTGCGTTGCAGAGTATTCT
CTACTATGCAAAATTNCTGAGTACCAGACAACATACATAAGCCTTATGGA
TGGTGTAACCATGGGTTGTGGAATCGGCATATCCGGTCATTGTCGCTACC
GAATTGTAACAGAAAAAACTCTTCTAAGCCTGCCCGGAAAATGGAAATGG
GTTGTTCCCGGCACGTTGGATTTTCATACATAGCAGCCAAACGGTCTGGA
GGGCGGATCGGGTGGGGCGTATTCTTGGTTGTGACCGGAAAAGAAATTAC
AAAACTTCTGGGGCCCTCCTTGGCTGGGCTTGGAGGCGGTTTTGGGGCCA
TGGGAAATTGGGTGGGTGAAGGGGGGGCCTGTTGGGGGTGCGTTTCCAGA
GACC
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