EY729163

Overview
NameEY729163
Unique NameEY729163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:45..893. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 1.149e-115
Identity = 206/224 (91.96%), Postives = 212/224 (94.64%), Query Frame = 1
Query:  118 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCLDPMVWKRR 789
            FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSV PGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQ++YV  +HAALFTSTIMSKLL RPNV LFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSC+DP V + +
Sbjct:    9 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 232          

HSP 2 Score: 29.6462 bits (65), Expect = 1.149e-115
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  791 VVSSCCHDGPFGA 829
            VVSSC HDGPFGA
Sbjct:  234 VVSSCGHDGPFGA 246          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.739e-90
Identity = 160/210 (76.19%), Postives = 182/210 (86.67%), Query Frame = 1
Query:  160 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCLDPMVWKRR 789
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSV PGGGAWLGGQLFS MVVRKPAH+FLDELGI+YDEQ++YV  +HAALFTSTIMSKLL RPNV LFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSC+DP V + +
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 228          

HSP 2 Score: 29.6462 bits (65), Expect = 1.739e-90
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  791 VVSSCCHDGPFGA 829
            VVSSC HDGPFGA
Sbjct:  230 VVSSCGHDGPFGA 242          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.551e-85
Identity = 157/222 (70.72%), Postives = 183/222 (82.43%), Query Frame = 1
Query:  127 SVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCLDPMVWKRR 789
            S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSV PGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDEQ+ YV  +HAALFTSTIMSKLL RPNV LFNAVAAEDLIVKG RVGGVVTNWALV+ NH TQSC+DP V + +
Sbjct:    9 SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAK 225          

HSP 2 Score: 29.6462 bits (65), Expect = 3.551e-85
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  791 VVSSCCHDGPFGA 829
            VVSSC HDGPFGA
Sbjct:  227 VVSSCGHDGPFGA 239          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.556e-82
Identity = 156/230 (67.83%), Postives = 178/230 (77.39%), Query Frame = 1
Query:  133 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCLDPMVWKRR 789
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSV PGGGAWLGGQLFSAMVVRKPAH+FLDELG+ YDE E YV  +HAALFTST+MS LL RPNV LFNAVA EDLIV+GGRVGGVVTNWALVSMNHDTQSC+DP V + +
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 231          

HSP 2 Score: 29.6462 bits (65), Expect = 3.556e-82
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  791 VVSSCCHDGPFGA 829
            VVSSC HDGPFGA
Sbjct:  233 VVSSCGHDGPFGA 245          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.980e-81
Identity = 153/228 (67.11%), Postives = 176/228 (77.19%), Query Frame = 1
Query:  133 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCLDPMVWKRR 789
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSV PGGGAWLGGQLFSAMVVR+PAH+FLDELG+ YDE E YV  +HAALFTST+MS+LL RPNV LFNAVA EDLIV+ GRVGGVVTNWALVSMNHDTQSC+DP V + +
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 228          

HSP 2 Score: 29.6462 bits (65), Expect = 2.980e-81
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  791 VVSSCCHDGPFGA 829
            VVSSC HDGPFGA
Sbjct:  230 VVSSCGHDGPFGA 242          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 1.175e-55
Identity = 109/182 (59.89%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  247 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGG-----RVGGVVTNWALVSMNHDTQSCLDP 771
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV PGGGAWLGGQLFSAMVVRKPA +FL+E+G+ Y+++  YV  +HAALFTST+M++ L  PNV LFNA A EDLIVK G     R+ GVVTNW LVS+NH  QSC+DP
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDP 218          

HSP 2 Score: 24.6386 bits (52), Expect = 1.175e-55
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 2
Query:  791 VVSSCCHDGPFGA 829
            VVS+  HDGPFGA
Sbjct:  226 VVSATGHDGPFGA 238          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.455e-53
Identity = 106/169 (62.72%), Postives = 128/169 (75.74%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDTQSCLDP 771
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SV PGGGAWLGGQLFSAM++RKPA  FL E+G+ Y+++ +YV  +HAALFTSTIMSK+L  PN+ LFNA   EDLI +    G R+ GVVTNW LVSM+HD QSC+DP
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDP 212          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.545e-52
Identity = 106/169 (62.72%), Postives = 126/169 (74.56%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDTQSCLDP 771
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SV PGGGAWLGGQLFSAMV+RKPA  FL E+G+ Y+++ +YV  +HAALFTSTIMSK+L  PN  LFNA   EDLI +    G R+ GVVTNW LVSM+HD QSC+DP
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDP 216          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.635e-51
Identity = 104/201 (51.74%), Postives = 136/201 (67.66%), Query Frame = 1
Query:  202 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKG-------GRVGGVVTNWALVSMNHDTQSCLDP 771
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V PGGG WLGGQL SAMV RKPA  FLD++G+ Y+++ ++V  +HAALFTST++SK+L  PNV +FNA A EDLI+K         R+ G VTNW LVS+NHD QSC+DP
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDP 224          

HSP 2 Score: 21.9422 bits (45), Expect = 3.635e-51
Identity = 9/13 (69.23%), Postives = 9/13 (69.23%), Query Frame = 2
Query:  791 VVSSCCHDGPFGA 829
            V S   HDGPFGA
Sbjct:  232 VCSFAGHDGPFGA 244          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 2.325e-50
Identity = 101/172 (58.72%), Postives = 128/172 (74.42%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE--QEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVK-----GGRVGGVVTNWALVSMNHDTQSCLDP 771
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SV PGGGAWLGGQLFSAMV+R+PA +FL+ELG+ Y+E    +YV  +HA+LFTST+MSK+L  PNV LFNA A EDLI +       ++ GVV NW LV+++HD  SC+DP
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDP 219          

HSP 2 Score: 23.8682 bits (50), Expect = 2.325e-50
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2
Query:  791 VVSSCCHDGPFGA 829
            ++S+  HDGPFGA
Sbjct:  227 IISTTGHDGPFGA 239          
The following BLAST results are available for this feature:
BLAST of EY729163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
THI4_CITSI1.149e-11591.96Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL1.739e-9076.19Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH3.551e-8570.72Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE3.556e-8267.83Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE2.980e-8167.11Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO1.175e-5559.89Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX2.455e-5362.72Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSSH3.545e-5262.72Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_UROFA3.635e-5151.74Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_ASPOR2.325e-5058.72Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-D01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729163 ID=EY729163; Name=EY729163; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGCATCATCACTGCTGCAAATCAAATTACTTCTCATTATCA
AACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCATGGCAG
CCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAG
CTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACG
TCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTT
CTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAA
GAATCCATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGACATGAT
CACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCC
TCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATT
ATCGAACAGTCTGTTATCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCT
CTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGC
TTGGCATCGACTACGATGAGCAAGAACACTATGTTGNTGATCAGCATGCA
GCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGCCCCGCCCCAACGT
CNAGCTCTTTAATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCA
GAGTTGGTGGTGTGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGAT
ACACAGTCTTGCTTGGATCCCATGGTATGGAAGCGAAGGGGTTGTGAGCT
CCTGTTGCCATGATGGGCCTTTTGGGGCCCTGGAGTAANAGGTTAAAA
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