EY729162

Overview
NameEY729162
Unique NameEY729162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8460 contig Csv1_Contig8460:492..1425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: APMAP_MOUSE (Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.371e-29
Identity = 81/253 (32.02%), Postives = 137/253 (54.15%), Query Frame = 1
Query:  145 ILVCDADKGLLKVTEE--GVTVLASH---VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL-SSPG---LEFVHTSKATKHLLXAFPXLNQLVAPLHKKXXXXXXXXXXXXXRKFEDPX*KVMSFVTSALEFDDHLYLGKPHTNFIGKLALKA 873
            + V DA KGL +V  +   V +L S    + G +++  +DL    DG  IYF+ +S+K+   ++ L ++EA   G+LL+YD    E  +LLD L F NGV LS +ED+++V ET   R  + ++ G  K   ++FVEN+PG PDNI+ +  G +W+A   + ++PG   L+F+      K ++        ++  + +              R   DP  +V+++V+ A E D +LYLG   + FI +L+L++
Sbjct:  162 LFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTVTRDGRKIYFTDSSSKWQRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIFKMFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFICRLSLQS 414          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: APMAP_RAT (Adipocyte plasma membrane-associated protein OS=Rattus norvegicus GN=Apmap PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.181e-28
Identity = 80/253 (31.62%), Postives = 136/253 (53.75%), Query Frame = 1
Query:  145 ILVCDADKGLLKVTEE--GVTVLASH---VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL-SSPG---LEFVHTSKATKHLLXAFPXLNQLVAPLHKKXXXXXXXXXXXXXRKFEDPX*KVMSFVTSALEFDDHLYLGKPHTNFIGKLALKA 873
            + V DA KGL +V  +   V +L S    + G +++  +DL    DG  IYF+ +S+K+   ++ L ++E    G+LL+YD    E  +LLD L F NGV LS +ED+++V ET   R  + ++ G  K   ++FVEN+PG PDNI+ +  G +W+A   + ++PG   L+F+      K ++        ++  + +              R   DP  +V+++V+ A E D +LYLG   + FI +L+L++
Sbjct:  123 LFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTITRDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETAMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIFKLFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFICRLSLQS 375          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: APMAP_BOVIN (Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.023e-26
Identity = 78/251 (31.08%), Postives = 131/251 (52.19%), Query Frame = 1
Query:  145 ILVCDADKGLLKVT---EEGVTVLASH--VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL-SSPG---LEFVHTSKATKHLLXAFPXLNQLVAPLHKKXXXXXXXXXXXXXRKFEDPX*KVMSFVTSALEFDDHLYLGKPHTNFIGKLAL 867
            + V DA KGL +V     E   +L+S   + G +++  +DL    DG  IYF+ +S+K+   ++ L L+E    G+LL+YD    E  +LLD L F NGV LS  ED+++V E    R  ++++ G  K   ++FVENLPG PDNI+ +  G +W+++  + ++PG   L+F+      K ++        ++  + +              R   DP  +V+++V+ A E   HLYLG     ++ +L L
Sbjct:  162 LFVVDAYKGLFEVNPWKREVKLLLSSETPIEGRKMSFLNDLTVTRDGRKIYFTDSSSKWQRRDYLLLLMEGTDDGRLLEYDTQTKEVKVLLDHLRFPNGVQLSPAEDFVLVVELAMVRIRRFYVSGLMKGGADVFVENLPGFPDNIRASSSGGYWVSMAAIRANPGFSMLDFLSERPFLKKVIFKLFSQETVMKFVPRYSLVLELSDSGTFLRSLHDPEGQVVTYVSEAHEHSGHLYLGSFRAPYLCRLRL 412          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: APMAP_HUMAN (Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.745e-26
Identity = 78/253 (30.83%), Postives = 130/253 (51.38%), Query Frame = 1
Query:  145 ILVCDADKGLLKVT---EEGVTVLASH--VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL-SSPG---LEFVHTSKATKHLLXAFPXLNQLVAPLHKKXXXXXXXXXXXXXRKFEDPX*KVMSFVTSALEFDDHLYLGKPHTNFIGKLALKA 873
            + V DA KGL +V     E   +L+S   + G  ++  +DL    DG  IYF+ +S+K+   ++ L ++E    G+LL+YD    E  +LLD L F NGV LS  ED+++V ET   R  + ++ G  K   ++FVEN+PG PDNI+ +  G +W+ +  +  +PG   L+F+      K ++        ++  + +              R   DP   V ++++   E D HLYLG   + F+ +L+L+A
Sbjct:  163 LFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTVTQDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMPGFPDNIRPSSSGGYWVGMSTIRPNPGFSMLDFLSERPWIKRMIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDGLVATYISEVHEHDGHLYLGSFRSPFLCRLSLQA 415          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.888e-26
Identity = 79/254 (31.10%), Postives = 132/254 (51.97%), Query Frame = 1
Query:  139 NEILVCDADKGLLKV---TEEGVTVLASH--VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI-LQLSSPG---LEFVHTSKATKHLLXAFPXLNQLVAPLHKKXXXXXXXXXXXXXRKFEDPX*KVMSFVTSALEFDDHLYLGKPHTNFIGKLALK 870
            N + V DA  GL +V   T E   ++++   + G +++  +DL    DG  IYF+ +S+K+   ++   ++E    G+LL+YD    E  +L+  L F NGV LS  ED+++V ET   R  +Y++ G  K   ++FVEN+PG PDNI+L+  G +W+A+ +   +PG   L+F+      K ++        +   L K+             R F DP    + +V+ A E + +LYLG   + FI +L L+
Sbjct:  160 NTLFVADAYYGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFLVMEGTDDGRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLETAMARIRRYYVSGLMKGGADMFVENMPGLPDNIRLSSSGGYWVAMPVVRPNPGFSMLDFLSEKPWIKRMIFKLLSQETVTKLLPKRSLVVELSETGSYRRSFHDPTGLTVPYVSEAHEHNGYLYLGSFRSPFICRLNLQ 413          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.930e-25
Identity = 80/251 (31.87%), Postives = 131/251 (52.19%), Query Frame = 1
Query:  145 ILVCDADKGLLKVTEEG--VTVLASH---VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL-SSPG---LEFVHTSKATKHLLXAFPXLNQLVAPLHKKXXXXXXXXXXXXXRKFEDPX*KVMSFVTSALEFDDHLYLGKPHTNFIGKLAL 867
            + V DA  GL KV      VT L S    V G R++  +DL    DG  +YF+ +S+++   ++   ++EA   G++L+YD    E ++L+++L FANG+ L  DE+ ++V ET   R  +  + G +K   + FV+NLPG PDNI+ +  G +W+A+  +  +PG   L+F+      K L+      + L+  + +              R F DP   V ++V+ A E D HLYLG   + ++ KL L
Sbjct:  163 LFVADAYLGLFKVNPVTGEVTNLVSAGQMVGGRRLSFVNDLDVTQDGRKVYFTDSSSRWQRRDYLHLIMEATADGRVLEYDTETKEVTVLMENLRFANGIQLFPDEESVLVAETTMARIRRVHVSGLNKGGMDTFVDNLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQKPWIKKLIFKLFSQDVLMKFVPRYSLVIELQESGACMRSFHDPHGMVAAYVSEAHEHDGHLYLGSFRSPYLCKLDL 413          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.255e-23
Identity = 70/251 (27.89%), Postives = 126/251 (50.20%), Query Frame = 1
Query:  145 ILVCDADKGLLKVTE-----EGVTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL-SSPG---LEFVHTSKATKHLLXAFPXLNQLVAPLHKKXXXXXXXXXXXXXRKFEDPX*KVMSFVTSALEFDDHLYLGKPHTNFIGKLAL 867
            + V DA  GL +V       + +      + G R+   +DL    DG  +YF+ +S+++   ++   ++EA   G++L+YD    E ++++++L F NG+ L  DE+ ++V ET   R  +  + G +K   + F+ENLPG PDNI+ +  G +W+A+  +  +PG   L+F+      K L+      + L+  + +              R F DP   V ++ + A E+  HLYLG   + ++ KL L
Sbjct:  162 LFVADAYLGLFEVNPVTGEVKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHLIMEATADGRVLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAETTMARIKRVHVSGLNKGGMDTFIENLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQRPWLKKLIFKLFSQDTLLKFVPRYSLVVELQSDGTCVRSFHDPQGLVSAYSSEAHEYSGHLYLGSFRSPYLCKLDL 412          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: STSY_RAUSE (Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.533e-14
Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 1
Query:   49 WIKRLHKNGTWENWKXXXXXXXXXXXXXQENEILVCDADKGLLKVTEEG--VTVLASHVNGSRIN-LADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIA 597
            W K   +N T    +             Q N++ + D    L  V  EG   T LA+ V+G     L    +    G +YF+  ST +        +  +   G+L+KYDPS  ET++LL  L    G  +S D  +++V E +  + +KYWL+G  K   E+ V+ +P  P NIK   DG FW++
Sbjct:   84 WNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP-NPGNIKRNADGHFWVS 267          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: STSY_RAUMA (Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.533e-14
Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 1
Query:   49 WIKRLHKNGTWENWKXXXXXXXXXXXXXQENEILVCDADKGLLKVTEEG--VTVLASHVNGSRIN-LADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIA 597
            W K   +N T    +             Q N++ + D    L  V  EG   T LA+ V+G     L    +    G +YF+  ST +        +  +   G+L+KYDPS  ET++LL  L    G  +S D  +++V E +  + +KYWL+G  K   E+ V+ +P  P NIK   DG FW++
Sbjct:   82 WNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP-NPGNIKRNADGHFWVS 265          
BLAST of EY729162 vs. ExPASy Swiss-Prot
Match: STS1_ARATH (Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.890e-13
Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 1
Query:  142 EILVCDADKGLLKVTEEG--VTVLASHVNGSRINLADDL-IAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETIKFRCLKYWLKGESKEQTEIFVENLPGGPDNIK-LAPDGSFWIA 597
            ++ V DA  GL  ++  G   T +   V+G      D L +  T G +YF+  S++F      + L      GKL KYDPS    ++L++ L  + G A+S D  +++V +  K    +YW+KG     +E F  N    PDNIK +   G+FW+A
Sbjct:  110 DLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVYFTSFSSRFSPIQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLVSQFTKSNIKRYWIKGPKAGSSEDFT-NSVSNPDNIKRIGSTGNFWVA 264          
The following BLAST results are available for this feature:
BLAST of EY729162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
APMAP_MOUSE8.371e-2932.02Adipocyte plasma membrane-associated protein OS=Mu... [more]
APMAP_RAT3.181e-2831.62Adipocyte plasma membrane-associated protein OS=Ra... [more]
APMAP_BOVIN1.023e-2631.08Adipocyte plasma membrane-associated protein OS=Bo... [more]
APMAP_HUMAN1.745e-2630.83Adipocyte plasma membrane-associated protein OS=Ho... [more]
APMAP_CHICK3.888e-2631.10Adipocyte plasma membrane-associated protein OS=Ga... [more]
APMAP_SALSA1.930e-2531.87Adipocyte plasma membrane-associated protein OS=Sa... [more]
APMAP_DANRE5.255e-2327.89Adipocyte plasma membrane-associated protein OS=Da... [more]
STSY_RAUSE1.533e-1430.11Strictosidine synthase OS=Rauvolfia serpentina GN=... [more]
STSY_RAUMA1.533e-1430.11Strictosidine synthase (Fragment) OS=Rauvolfia man... [more]
STS1_ARATH2.890e-1332.05Strictosidine synthase 1 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-C11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729162 ID=EY729162; Name=EY729162; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGGACGCGTGGGCCTTTATACGGCCACAAGAGATGGTTG
GATTAAAAGATTGCATAAAAATGGAACCTGGGAGAATTGGAAGCTGATTG
GGGGTGATACTTTACTTGGAATCACAACAACACAGGAAAATGAAATACTT
GTATGCGACGCAGATAAGGGTTTGCTTAAGGTTACAGAAGAGGGAGTAAC
AGTTCTTGCATCACATGTCAATGGATCCAGAATAAATTTGGCAGACGATC
TGATCGCGGCAACAGATGGGAGTATTTATTTTAGTGTGGCAAGCACCAAA
TTTGGGCTTCATAACTGGGGCCTAGACCTTCTCGAGGCGAAACCACACGG
AAAGCTGCTCAAATATGATCCTTCATTGAATGAAACATCGATTCTGCTTG
ATAGTTTGTTCTTCGCTAATGGCGTTGCACTCTCGAAAGATGAAGACTAT
TTAGTTGTCTGTGAAACGATTAAATTCAGGTGCCTTAAGTATTGGCTGAA
GGGCGAGAGTAAAGAACAAACAGAAATTTTTGTCGAAAACCTTCCAGGCG
GACCTGATAACATCAAACTCGCCCCAGATGGCTCTTTCTGGATCGCGATA
CTGCAGTTGAGTTCTCCAGGGCTAGAGTTTGTGCACACTTCCAAGGCAAC
CAAACATCTGCTANCAGCATTTCCANAACTAAATCAGCTGGTTGCCCCCT
TGCACAAGAAAGCGGCAGTAGTAAACGTTGCGGCAAATGGCATTGTAATC
AGAAAGTTTGAAGATCCTNNATGAAAGGTGATGTCCTTTGTGACTTCTGC
NTTGGAGTTTGATGATCATCTCTACTTGGGCAAGCCTCACACCAACTTCA
TCGGGAAACTGGCTCTGAAAGCTACATAATGGTCCGAATCGCTCAGGAAA
ATGGTTTCTCCACCGACAAAAGGGGAACCAATCT
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