EY729149

Overview
NameEY729149
Unique NameEY729149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729149 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 9.412e-12
Identity = 23/82 (28.05%), Postives = 49/82 (59.76%), Query Frame = 3 
Query:  399 NNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRKLMRGRNRLALLDCIECFXETL 644
            N F++ +C++TTY  +C  SL+ ++K+ +N+P + A   + V++   +    F+ +L + K ++ R   A+ DC+E   ++L
Sbjct:   26 NQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSL 107

HSP 2 Score: 36.965 bits (84), Expect = 9.412e-12
Identity = 18/37 (48.65%), Postives = 24/37 (64.86%), Query Frame = 2 
Query:  671 LRRASAREF**TMDDLTTFVSAALTYEDTCLDGFEGQ 781
            L  A   +F   M ++ T+VSAALT E TC+DGF G+
Sbjct:  120 LSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGK 156
The following BLAST results are available for this feature:
BLAST of EY729149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
21KD_DAUCA9.412e-1228.0521 kDa protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-B09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729149 ID=EY729149; Name=EY729149; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGCAGCATCATCAGTCAATATTTAGCAAACAGATCTTCCCT
CTCAGGATCTATATCATCACCCTCATCCCAAATTTCATGAGAAACTCACC
AGTCCATTCACATGCTCTTTCACTTTCTTAATCAGCCTGTTCTACCCTTT
CCCCTTCTTTATTACACTCACCAGCCTCTTGCCTTGGTAACAACTAGAAA
AGCGCCCAAAAACTTCTTATAAAGTTTCCCATCAAAAAGCTTCTGTTAAT
TCAGGCTTCACATTTGATAGATATGATTTCTTTTTTTCACCCATTTTAAA
TCCTAGAAATAAAAGAAATGGCAGGACCAAACATGTTCATGTTGTTCATG
CTCCTTGCCTGGCTAGCAAAATCTGGCGAATCGGCATCCGGGAATAGGAA
TAACTTCGTCCGAGATGCATGTAGTGTGACAACATATCGAGATCTTTGTA
TCCACTCGCTAGCACCATTTTCTAAGAGTGCTAGGAATAGTCCTGGGAAG
TGGGCGCGTGCTGGCGTCTCGGTGACAATAGGTGAGGTCAAGAACGTAAC
TCAATTCTTGTACAAATTGAAGAGAAGAAAACTTATGAGAGGGAGAAATC
GATTGGCTCTTTTAGATTGCATCGAGTGCTTTNCAGAAACATTGATGAAC
TTCACATGTCGCTTGGCATACTGAGGAGGGCTAGTGCAAGAGAGTTTTGA
TAGACAATGGATGATCTCACAACCTTTGTGAGCGCTGCACTGACTTATGA
GGACACTTGCTTGGATGGGTTTGAAGGGCAAAAGGGCACGCAGTAAATTT
GCTTAAAAACGAGTTTTGAAACACTTATTTAGCAAGCATGCTCTGGCTCT
TATTNACAACTTGCANCACAAGTTTGGAAGCCTGCCCTGCCGACCAAANN
AGGGGGGGGTGTGTGGGTGGGG
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