EY729045

Overview
NameEY729045
Unique NameEY729045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEFS (Agmatine deiminase OS=Pseudomonas fluorescens (strain SBW25) GN=aguA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.178e-37
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAM+VLQSSTDAQGRSFTVHKMPIPGPLYAT
Sbjct:  210 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMNVLQSSTDAQGRSFTVHKMPIPGPLYAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEP1 (Agmatine deiminase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=aguA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.508e-32
Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGHVDNFCCYVRPGEVLLAWTDD  DPNYARCHAAMDVL+++ DA+GR F VHKMPIPGPLYAT
Sbjct:  210 YNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMDVLKNTRDAKGREFIVHKMPIPGPLYAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSESM (Agmatine deiminase OS=Pseudomonas syringae pv. tomato GN=aguA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.582e-32
Identity = 56/69 (81.16%), Postives = 65/69 (94.20%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            FNDETDGHVDNFCCY+RPGEVLLAWTDDP+DPNY RCHAA+ +L+++ DAQGR+F VHKMPIPGPL+AT
Sbjct:  210 FNDETDGHVDNFCCYIRPGEVLLAWTDDPEDPNYPRCHAALSILENTRDAQGRAFIVHKMPIPGPLFAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEU2 (Agmatine deiminase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aguA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.815e-32
Identity = 55/69 (79.71%), Postives = 66/69 (95.65%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            FNDETDGHVDNFCCY+RPGEVLLAWTDDP+DPNY+RCHAA+ +L+++ DA+GR+F VHKMPIPGPL+AT
Sbjct:  210 FNDETDGHVDNFCCYIRPGEVLLAWTDDPEDPNYSRCHAALSILENTLDAKGRAFIVHKMPIPGPLFAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEPK (Agmatine deiminase OS=Pseudomonas putida (strain KT2440) GN=aguA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.021e-31
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGHVDNFCCYVRPGEVLLAWTDD  DPNYARCHAAMDVL+++ DA+GR F VHKMPIPGPL+AT
Sbjct:  210 YNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMDVLKNTRDAKGREFIVHKMPIPGPLFAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSE14 (Agmatine deiminase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aguA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.021e-31
Identity = 55/69 (79.71%), Postives = 66/69 (95.65%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            FNDETDGHVDNFCCY+RPGEVLLAWTDDP+DPNY+RCHAA+ +L+++ DA+GR+F VHKMPIPGPL+AT
Sbjct:  210 FNDETDGHVDNFCCYIRPGEVLLAWTDDPEDPNYSRCHAALGILENTLDAKGRAFIVHKMPIPGPLFAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEPG (Agmatine deiminase OS=Pseudomonas putida (strain GB-1) GN=aguA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.333e-31
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            FNDETDGHVDNFCCYVRPGEVLLAWTDD  DPNYARCHAAM+VL+++ DA+GR F VHKMPIPGPL+AT
Sbjct:  210 FNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMEVLKNTRDAKGREFIVHKMPIPGPLFAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEF5 (Agmatine deiminase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=aguA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.274e-31
Identity = 57/69 (82.61%), Postives = 64/69 (92.75%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNY RC AA+ VL+++ DA+GR+F VHKMPIPGPLYAT
Sbjct:  210 YNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYPRCQAALQVLENTRDAKGRTFKVHKMPIPGPLYAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEAB (Agmatine deiminase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=aguA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGHVDNFCCYVRPGEVLLAWTDD  DPNY RC AA+ VL+ S DA+GR   VHKMPIPGPLYAT
Sbjct:  210 YNDETDGHVDNFCCYVRPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEA8 (Agmatine deiminase OS=Pseudomonas aeruginosa (strain LESB58) GN=aguA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGHVDNFCCYVRPGEVLLAWTDD  DPNY RC AA+ VL+ S DA+GR   VHKMPIPGPLYAT
Sbjct:  210 YNDETDGHVDNFCCYVRPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYAT 278          
The following BLAST results are available for this feature:
BLAST of EY729045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
AGUA_PSEFS6.178e-3798.55Agmatine deiminase OS=Pseudomonas fluorescens (str... [more]
AGUA_PSEP13.508e-3285.51Agmatine deiminase OS=Pseudomonas putida (strain F... [more]
AGUA_PSESM4.582e-3281.16Agmatine deiminase OS=Pseudomonas syringae pv. tom... [more]
AGUA_PSEU27.815e-3279.71Agmatine deiminase OS=Pseudomonas syringae pv. syr... [more]
AGUA_PSEPK1.021e-3184.06Agmatine deiminase OS=Pseudomonas putida (strain K... [more]
AGUA_PSE141.021e-3179.71Agmatine deiminase OS=Pseudomonas syringae pv. pha... [more]
AGUA_PSEPG1.333e-3184.06Agmatine deiminase OS=Pseudomonas putida (strain G... [more]
AGUA_PSEF52.274e-3182.61Agmatine deiminase OS=Pseudomonas fluorescens (str... [more]
AGUA_PSEAB3.630e-2979.71Agmatine deiminase OS=Pseudomonas aeruginosa (stra... [more]
AGUA_PSEA83.630e-2979.71Agmatine deiminase OS=Pseudomonas aeruginosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-H04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729045 ID=EY729045; Name=EY729045; organism=Citrus sinensis; type=EST; length=226bp
CCGGCGCATTCTTCCTCNGGTTGCGTACAGCGGCCCCGGGATCGGCATTT
TATGCACTGTGAACGAGCGGCCCTGAGCGTCAGTGCTGCTTTGCAGTACG
TCCATGGCGGCATGGCAGCGTGCGTAGTTTGGGTCTTGCGGGTCGTCGGT
CCACGCCAGCAACACTTCGCCCGGGCGCACGTAGCAGCAGAAGTTATCCA
CATGCCCGTCGGTTTCGTCATTGAAC
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