EY729032

Overview
NameEY729032
Unique NameEY729032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY729032 vs. ExPASy Swiss-Prot
Match: Y5957_ARATH (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.610e-39
Identity = 98/193 (50.78%), Postives = 114/193 (59.07%), Query Frame = 1 
Query:  115 ITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKXXXXXXXXXXXXXXXXXXXXXXXAYGFQPGMGRPEPYGSGRPESEYASG--------YAKRPDSQEYGSGYGKRPESE-EYGSGYGRKPDSEVHGSGYGRRPESG-ESGYGGRTESQYGGS-TYGRKPEYESGY 660
            IT+ YGRP+PPSDETCYP SS  D DF+Y RP+F+   EPSAY DEALN EYSSY+RPK                        YG + G GR       +PESEY SG        Y +RP+ Q YGSGYG R E+E EYGSG G + + E     YGRRPESG  SGYGGR+ES+Y    +YGR  E E GY
Sbjct:   28 ITVIYGRPIPPSDETCYPLSSGVDDDFEYERPEFTQIHEPSAYGDEALNTEYSSYSRPK-PRPAFRPDSGGGGHVQGERPNPGYGSESGYGR-------KPESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVE-----YGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGY 206
The following BLAST results are available for this feature:
BLAST of EY729032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5957_ARATH1.610e-3950.78Uncharacterized protein At5g39570 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-F10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729032 ID=EY729032; Name=EY729032; organism=Citrus sinensis; type=EST; length=867bp
CACGCGTCCGATCGCGATCGGAACAGAGAAACAATGCCGTACTACGCTGA
CAATGACGATGACGTTACTGATTTCGACGATTACGATCCAACACCCTACG
ATGGTGGATACGACATCACTTTGACTTACGGCCGTCCTCTGCCACCGTCC
GATGAGACTTGTTACCCATCATCGTCGGCGTCAGATGGTGACTTCGACTA
CGCTCGTCCCAAGTTCTCGTCGCACTCGGAGCCTTCAGCCTACGCTGACG
AAGCTCTCAATAACGAGTACAGCTCCTACGCCCGACCAAAGCCTCGTCCC
GGTTTCGTACCCGGGTCAGGGGGTGGGTCGGGTTATGGAGGAAGGCCCCA
NCCGCAGCCGGCTTATGGGTTTCAGCCTGGAATGGGAAGGCCCGAACCTT
ATGGGTCGGGGAGGCCCGAATCTGAATATGCTTCTGGGTATGCGAAGAGG
CCTGATTCGCAGGAATATGGATCTGGGTACGGAAAGAGACCCGAGTCGGA
GGAATATGGATCTGGGTACGGCAGGAAACCTGATTCCGAGGTGCATGGCT
CTGGATATGGGCGGAGACCGGAGTCCGGTGAATCCGGATATGGTGGTAGG
ACTGAGTCCCAGTATGGAGGATCAACGTATGGACGAAAACCCGAATATGA
GTCCGGTTATGGCCGCAACCCGGATATGAATCTGGCTATGGTGGAAAACA
CGGTACGATTCTGGATATTGGAGCAACCCCAATTTGAATCCCGATTTGGT
AGGAAACCCCCCTCGAATCTGGGTTTGGGAGCAAGCCCGGATTGAATCCG
GCTATGGTTGGAACCCCGACACTATTCCGGCTACGGGAGTTACCTGATGA
TGGGTCCGGCTATGGGA
back to top