EY729030

Overview
NameEY729030
Unique NameEY729030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: PFPI_PYRHO (Intracellular protease 1 OS=Pyrococcus horikoshii GN=pfpI PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.033e-23
Identity = 52/131 (39.69%), Postives = 83/131 (63.36%), Query Frame = 3
Query:  120 TYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKAL 512
            T +   G++  ++ TFD+++P ++D LV+PGGRAPE + +N+  + + RK  + GK +ASICHG  IL +A V++GRK T+YP +K  +I AG  W++ E     VVDGN ++         ++R F+K L
Sbjct:   39 TITGKHGYSVKVDLTFDKVNPEEFDALVLPGGRAPERVRLNEKAVSIARKMFSEGKPVASICHGPQILISAGVLRGRKGTSYPGIKDDMINAGVEWVDAEV----VVDGNWVSSRVPADLYAWMREFVKLL 165          
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: PFPI_PYRFU (Intracellular protease 1 OS=Pyrococcus furiosus GN=pfpI PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22
Identity = 55/142 (38.73%), Postives = 85/142 (59.86%), Query Frame = 3
Query:  111 GHQTYSET---------RGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIIT----GATYEGHPEFIRL 497
            GH+ Y  +          G++  ++ TFDE++P ++D LV+PGGRAPE + +N+  +++ RK    GK +A+ICHG  IL +A V+KGRK T+Y  ++  +I AG  WI+ E     VVDGN ++    G  Y    EF++L
Sbjct:   27 GHEVYIASFEKGVITGKHGYSVKVDLTFDEVNPDEFDALVLPGGRAPERVRLNEKAVEIARKMFTEGKPVATICHGPQILISAGVLKGRKGTSYIGIRDDMINAGVEWIDREV----VVDGNWVSSRHPGDLYAWMREFVKL 164          
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: PFPI_PYRAB (Intracellular protease 1 OS=Pyrococcus abyssi GN=pfpI PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 49/124 (39.52%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  138 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIIT----GATYEGHPEFIRL 497
            G+   ++  F+E++P ++D LV+PGGRAPE + +N+  +++ +K  + GK +ASICHG  IL +A V++GR+ T+YP +K  +I AG  W++ E     VVDGN ++    G  Y    EF++L
Sbjct:   45 GYTVNVDLAFEEVNPDEFDALVLPGGRAPERVRLNEKAVEIAKKMFSEGKPVASICHGPQILISAGVLRGRRGTSYPGIKDDMINAGVDWVDAEV----VVDGNWVSSRVPGDLYAWMREFVKL 164          
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: PFPI_PYRKO (Intracellular protease 1 OS=Pyrococcus kodakaraensis GN=pfpI PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.035e-21
Identity = 58/142 (40.85%), Postives = 83/142 (58.45%), Query Frame = 3
Query:  111 GHQTY--SETRG-----HNFALNA--TFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIIT----GATYEGHPEFIRL 497
            GH+ Y  S  RG     H + +N    FDE+DP ++D LV+PGGRAPE + +N+  + + +K    GK +ASICHG  IL +A V+KGRK T+   ++  +  AGA WI+ E     VVDGN ++    G  Y    EF++L
Sbjct:   27 GHEVYVASFQRGKITGKHGYTVNVDLAFDEVDPDEFDALVLPGGRAPEIVRLNEKAVAITKKMFEDGKPVASICHGPQILISAGVLKGRKGTSTVTIRDDVKNAGAEWIDAEV----VVDGNWVSSRHPGDLYAWMREFVKL 164          
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: Y1281_ARCFU (Uncharacterized protein AF_1281 OS=Archaeoglobus fulgidus GN=AF_1281 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.127e-17
Identity = 46/126 (36.51%), Postives = 76/126 (60.32%), Query Frame = 3
Query:  135 RGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKAL 512
            +G+    + T++++    Y GLVIPGG++PE + +N+  +++V+ F   GK +A+ICHG  +L +A  VKGR+ T++  ++  LIAAGA + +       VVDGN+IT    +  P F    +K L
Sbjct:   44 KGYQVRPDLTYEDVKVEDYAGLVIPGGKSPERVRINERAVEIVKDFLELGKPVAAICHGPQLLISAMAVKGRRMTSWIGIRDDLIAAGALYED----RPVVVDGNVITSRMPDDLPYFCGELIKIL 165          
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: YHBO_ECOLI (Protein yhbO OS=Escherichia coli (strain K12) GN=yhbO PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.201e-16
Identity = 44/121 (36.36%), Postives = 72/121 (59.50%), Query Frame = 3
Query:  153 LNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALG 515
            ++ + DE+ P ++D L++PGG +P+YL  ++  +   R F NSGK + +ICHG  +L +ADV++GRK TA  P+   +  AGA + + E +   V    ++T  T +  P F R  L+ LG
Sbjct:   54 IDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVV---VDKDQLVTSRTPDDLPAFNREALRLLG 171          
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: Y967_METJA (Uncharacterized protein MJ0967 OS=Methanocaldococcus jannaschii GN=MJ0967 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 51/150 (34.00%), Postives = 81/150 (54.00%), Query Frame = 3
Query:   87 PTAVHQSTGHQT--YSETRG-------HNFALNATFDEIDPTKYDGLVIPGG-RAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPV--LIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLF 500
            P AV +S G +    S T+G       +   +  T  +++P  Y  +VI GG  + EYL  N  +I+LV++F N  K +++IC   ++LA A ++KG+K T YP  + +  L  AGA + +       VVDGN+IT  +    P++ RLF
Sbjct:   51 PMAVFESNGLKVDVVSTTKGECVGMLGNKITVEKTIYDVNPDDYVAIVIVGGIGSKEYLWNNTKLIELVKEFYNKNKVVSAICLSPVVLARAGILKGKKATVYPAPEAIEELKKAGAIYED----RGVVVDGNVITAKS----PDYARLF 192          
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: YRAA_BACSU (Putative cysteine protease yraA OS=Bacillus subtilis GN=yraA PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = 3
Query:  138 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKAL 512
            G    ++    ++D + +D L+IPGG +P+ L  +D   +  + F  + K + +ICHG  +L   D++KG+  T Y  ++  LI AGA++ + E     VV  NI+T  T +    F R  L  L
Sbjct:   48 GEKVKIDKAISDVDASDFDALLIPGGFSPDLLRADDRPGEFAKAFVENKKPVFAICHGPQVLIDTDLLKGKDITGYRSIRKDLINAGANYKDAEV----VVSHNIVTSRTPDDLEAFNRESLNLL 168          
BLAST of EY729030 vs. ExPASy Swiss-Prot
Match: GS18_BACSU (General stress protein 18 OS=Bacillus subtilis GN=yfkM PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 38/141 (26.95%), Postives = 68/141 (48.23%), Query Frame = 3
Query:   90 TAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKAL 512
            T + +  G     +       ++A+ D+++ + +D L+IPGG +P+ L  +D  +   + F    K + +ICHG  +L  A  + GRK T Y  ++  +  AGA  ++ E +   V    ++T  T +  P F R  L  L
Sbjct:   33 TVIEKEKGKTVKGKQGTAEVTVDASIDDVNSSDFDALLIPGGFSPDQLRADDRFVQFTKAFMTDKKPVFAICHGPQLLINAKALDGRKATGYTSIRVDMENAGADVVDKEVV---VCQDQLVTSRTPDDIPAFNRESLALL 170          
The following BLAST results are available for this feature:
BLAST of EY729030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PFPI_PYRHO5.033e-2339.69Intracellular protease 1 OS=Pyrococcus horikoshii ... [more]
PFPI_PYRFU3.262e-2238.73Intracellular protease 1 OS=Pyrococcus furiosus GN... [more]
PFPI_PYRAB9.492e-2239.52Intracellular protease 1 OS=Pyrococcus abyssi GN=p... [more]
PFPI_PYRKO8.035e-2140.85Intracellular protease 1 OS=Pyrococcus kodakaraens... [more]
Y1281_ARCFU4.127e-1736.51Uncharacterized protein AF_1281 OS=Archaeoglobus f... [more]
YHBO_ECOLI1.201e-1636.36Protein yhbO OS=Escherichia coli (strain K12) GN=y... [more]
Y967_METJA1.052e-1234.00Uncharacterized protein MJ0967 OS=Methanocaldococc... [more]
YRAA_BACSU1.163e-1131.20Putative cysteine protease yraA OS=Bacillus subtil... [more]
GS18_BACSU1.984e-1126.95General stress protein 18 OS=Bacillus subtilis GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-F08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729030 ID=EY729030; Name=EY729030; organism=Citrus sinensis; type=EST; length=905bp
CACGCGTCCGGCCTTTTCAAGCATTACTGGCTTTCGGAGTCTCAGTTGAC
GCCGCGTGTCCCGGAAAGAAATCCGGTGATGTTTGCCCCACTGCAGTTCA
TCAATCGACTGGTCATCAGACATATTCCGAGACACGTGGTCACAATTTCG
CACTCAATGCGACATTTGATGAAATTGACCCGACCAAATATGATGGCTTG
GTCATACCAGGAGGAAGAGCTCCAGAATATCTTGCTATGAATGATTCTGT
GATTGACTTAGTGAGAAAATTCTCCAACTCGGGCAAAACAATTGCTTCCA
TTTGCCATGGGCAGTTAATATTGGCAGCTGCTGATGTGGTCAAAGGTCGA
AAGTGCACAGCATATCCTCCTGTGAAACCTGTGCTTATTGCCGCTGGTGC
TTCTTGGATTGAGCCAGAGACCATGGCAGCTTGTGTTGTTGATGGTAACA
TCATTACTGGGGCTACCTACGAGGGTCATCCTGAGTTCATTCGGCTTTTT
CTTAAAGCACTGGGTGGCACCATAACTGGTTCTGATAAGAGAATTCTTTT
TCTTTGTGGGGATTACATGGAAGATTATGAGGTAGCTGTTCCTTTTCAGT
CCCTTCAGGCACTAAAGTGCCATGTTGATGCTGTATGCCCCAAAAAAAGG
CTGGGGACTCCTGCCCCACTGCTGTTCATGATTTTGAAGGTGATCAAACT
TACAGCGAGAAGCAAGCCATAATTTCACCCTACTGCGAACTTGAAAGTGT
TGATGTGTCGGGCTATGATGCTCCTGTTGTCCCTGGAGGTCGAGCACCNA
ATATCTGGCACTAATGAAATGGTATTGCTTATTGAAGGATTTTGAAGGCG
AAAAACAGTTGCTCCATTGCCTGGCGCGCCAATAATTGCCCCGGTGTTCC
TGAAG
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