EY729014

Overview
NameEY729014
Unique NameEY729014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729014 vs. ExPASy Swiss-Prot
Match: Y4139_ARATH (Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.146e-26
Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 3 
Query:  315 KRSLELVKSPKAMEQLDI*RGVCVPFRKYTPETVRNNVLESIGAVISLMSRGVEIVWSVGLYWSNLTYDSMVGREKR*FLIVLANFRISCVICGRAFIKLGRCLRTGLILYEED 656
            +R + + KS  A+EQLDI RGVCVPFRKY+PETVR+ VLES GAV+SL+SRGVEIVW++GLYWS LTYD +VGR++          R      G +FIK G+ L     +  ED
Sbjct:   85 ERGVRVGKSSSALEQLDIERGVCVPFRKYSPETVRSKVLESRGAVVSLVSRGVEIVWTLGLYWSTLTYDFLVGRDEEVVPFRARQLRNLLCNLGPSFIKAGQVLANRPDIIRED 198

HSP 2 Score: 73.9442 bits (180), Expect = 1.329e-12
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 2 
Query:  539 KEVVPDRARQLPNLLCNLWPGFHQTRQVLANRPDIV*RRYMIEVWVLQDEVTSFPIRLLGAL*KKNGFERLEPVFTKI 772
            +EVVP RARQL NLLCNL P F +  QVLANRPDI+   YM E+ +LQD+V  FP  +   + ++   + LE +F+KI
Sbjct:  160 EEVVPFRARQLRNLLCNLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNEVAFNIIEEELGQPLENIFSKI 237
The following BLAST results are available for this feature:
BLAST of EY729014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4139_ARATH6.146e-2654.39Uncharacterized aarF domain-containing protein kin... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-E01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729014 ID=EY729014; Name=EY729014; organism=Citrus sinensis; type=EST; length=888bp
CACGCGTCCGTTTTCAAATATTCTTCTCATCTCTGTATTGCAACGACCTG
GCCCTTGGTACTTTCGTTTCTCACCAAAATCACTCGCTCGCTCCGTCTTA
TCAACCATGGATTTGATTAATCCGAATTGGATAAACTCACTCGTTTTCTC
TACAAACAAGCATCGCCCAACGAACAAGTGCAGAAATGTATTTTCCACCT
CCCAGGAATCTTCGTTTCGGTTATCAACGGCGCCCCAGAGAAACGAGAGA
TTCTCAACTTCAATCTCGGCGAATGATGCTTCAGTTAACGGTGTGTACGA
CAACGCCCCCGGATAAGAGATCGTTGGAATTAGTGAAATCCCCTAAAGCG
ATGGAGCAATTAGACATCTAACGCGGCGTTTGCGTGCCGTTTCGCAAGTA
CACGCCTGAAACAGTGAGGAACAACGTATTGGAATCTATAGGGGCGGTAA
TTTCTCTAATGTCACGTGGAGTGGAGATAGTATGGAGTGTGGGATTGTAT
TGGTCTAATTTGACGTATGATAGTATGGTTGGAAGAGAAAAGAGGTAGTT
CCTGATCGTGCTCGCCAACTTCCGAATCTCTTGTGTAATTTGTGGCCGGG
CTTTCATCAAACTAGGCAGGTGCTTGCGAACAGGCCTGATATTGTATGAA
GAAGATATATGATTGAAGTCTGGGTCCTCCAAGATGAAGTCACCTCCTTC
CCAATCCGGTTGCTTGGAGCTTTATAAAAGAAGAATGGGTTCGAGCGTCT
GGAGCCCGTCTTCACGAAAATTCTTCCAGACAATACCGCTGGAGTCTGGT
GCAGTTACGGNCCACCTGCGTCAACAGGGAGGACTGGGATTANGGCAATG
CTGGGATAACCGCAATCACCGAATCTGTCGTTCGGAGT
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