EY729005

Overview
NameEY729005
Unique NameEY729005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length313
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729005 vs. ExPASy Swiss-Prot
Match: YHIH_ECOLI (Uncharacterized ABC transporter ATP-binding protein yhiH OS=Escherichia coli (strain K12) GN=yhiH PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 3 
Query:    6 PDEITRMRGARTLEEAFIAYLIDAGAGTQPGQAQTXXXXXXXXXXXXXXXHET-----RGVSLQRTFSYMWREALELRXXEPVRATLALAGSLLLMFVMGFGIXLDL 311
            P E+   RGA +LEEAFIAYL +A   +   +A                 H+T     +G SL+R FSY  REALELR  +PVR+TLAL G+++LM +MG+GI +D+
Sbjct:  491 PQELVEKRGAASLEEAFIAYLQEAAGQSNEAEAPPVV-------------HDTTHAPRQGFSLRRLFSYSRREALELRR-DPVRSTLALMGTVILMLIMGYGISMDV 583
The following BLAST results are available for this feature:
BLAST of EY729005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YHIH_ECOLI2.470e-1443.93Uncharacterized ABC transporter ATP-binding protei... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-D04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729005 ID=EY729005; Name=EY729005; organism=Citrus sinensis; type=EST; length=313bp
CCGCGCCCGACGAGATCACGCGGATGCGCGGCGCCAGGACGCTGGAAGAG
GCCTTCATCGCCTATCTGATCGACGCCGGGGCCGGCACCCAGCCGGGCCA
GGCCCAGACAGAGGCGGAAGCGCCCGCGCCGGCCGCCGCCCCGGAGCCAC
CGGCGCACGAGACCCGCGGCGTCAGCCTGCAGCGCACCTTCAGCTACATG
TGGCGCGAGGCGCTGGAACTGCGCCNCANCGAACCGGTGCGCGCCACGCT
GGCGCTGGCCGGCTCGCTGCTGCTGATGTTCGTGATGGGCTTTGGCATCA
NCCTGGACTTGGA
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