EY728989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_CAMVS (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.313e-15 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 44 FIVRNHAKINRRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIFQQKMDQILRKYGKF 367 F+V N A+ R K MV+NYK +N T D Y + NK++L+ I+ + I S F+C+ GFWQ +D + T F+ P+G ++ V+ LK P IFQ+ MD+ R + KF Sbjct: 287 FLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKF 397
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_CAMVE (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.313e-15 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 44 FIVRNHAKINRRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIFQQKMDQILRKYGKF 367 F+V N A+ R K MV+NYK +N T D Y + NK++L+ I+ + I S F+C+ GFWQ +D + T F+ P+G ++ V+ LK P IFQ+ MD+ R + KF Sbjct: 287 FLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKF 397
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_CAMVC (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.313e-15 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 44 FIVRNHAKINRRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIFQQKMDQILRKYGKF 367 F+V N A+ R K MV+NYK +N T D Y + NK++L+ I+ + I S F+C+ GFWQ +D + T F+ P+G ++ V+ LK P IFQ+ MD+ R + KF Sbjct: 287 FLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKF 397
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_CAMVN (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) GN=ORF V PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.990e-15 Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 44 FIVRNHAKINRRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIFQQKMDQILRKYGKF 367 F+V N A+ R MV+NYK +N T D Y + NK++L+ I+ + I S F+C+ GFWQ +D + T F+ P+G ++ V+ LK P IFQ+ MD+ R + KF Sbjct: 288 FLVNNEAENGRGNKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKF 398
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_CAMVD (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) GN=ORF V PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.990e-15 Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 44 FIVRNHAKINRRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIFQQKMDQILRKYGKF 367 F+V N A+ R K MV+NYK +N T D Y NK++L+ I+ + I S F+C+ GFWQ +D + T F+ P+G ++ V+ LK P IFQ+ MD+ R + KF Sbjct: 282 FLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNPPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKF 392
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_RTBVP (Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = -3 Query: 68 KHLKETIVHK-------TCKNLTLR*HNN*N*EFIVRNHAKINRRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIFQQKMDQ 445 K +KE + +K TC++ T FIVRNH++ +K +V NYKRLNDN + D + I +K +IN IQ NI SKF+ + GF K+ DD+ TTF+ EGL+ V + N P FQ+ M + Sbjct: 1201 KQIKELLDNKLIKKADPTCRHRTAA--------FIVRNHSEEVAQKPRIVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWTTFTCSEGLYTWNVCPFGIANAPCAFQRFMQE 1328
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_COYMV (Putative polyprotein OS=Commelina yellow mottle virus PE=4 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14 Identity = 55/183 (30.05%), Postives = 90/183 (49.18%), Query Frame = -3 Query: 41 DPIKYWNRNKFKAHL-----DIRMYISLLKHLKETIVHKTCKNLTLR*H---------NN*N*EFIVRNHAKIN-------RRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIFQQKMDQILRKYGKFV 517 +P+++W NK K L DI++ +KH+ + + L + + FIVR+ +I+ + K MV NYK LN+NT D Y + N +I+ + I SKF+ + GFWQ M+++ + T F L++ +V+ LKN P IFQ+KMD + + KF+ Sbjct: 1379 NPMEFWKNNKIKCKLNIINPDIKIMGRPIKHVTPGDEEAMTRQINLLLQMKVIRPSESKHRSTAFIVRSGTEIDPITGKEKKGKERMVFNYKLLNENTESDQYSLPGINTIISKVGRSKIYSKFDLKSGFWQVAMEEESVPWTAFLAGNKLYEWLVMPFGLKNAPAIFQRKMDNVFKGTEKFI 1561
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_FMVD (Enzymatic polyprotein OS=Figwort mosaic virus (strain DxS) GN=ORF V PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = -3 Query: 38 FIVRNHAKINRRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIFQQKMDQILRKYGKFVL 367 F+V N A+ R K MV+NYK +N T D + + N +L+ ++ ++I S F+C+ GFWQ +D++ T F+ P+G F+ V+ LK P IFQ+ M L KF + Sbjct: 280 FLVENEAERRRGKKRMVVNYKAINQATIGDSHNLPNMQELLTLLRGKSIFSSFDCKSGFWQVVLDEESQKLTAFTCPQGHFQWKVVPFGLKQAPSIFQRHMQTALNGADKFCM 392
BLAST of EY728989 vs. ExPASy Swiss-Prot
Match: POL_CERV (Enzymatic polyprotein OS=Carnation etched ring virus GN=ORF V PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11 Identity = 36/97 (37.11%), Postives = 57/97 (58.76%), Query Frame = -3 Query: 86 FIVRNHAKINRRKV*MVINYKRLNDNTYED*YKILNKNQLINCIQNENISSKFNCRLGFWQAKMDDDYILSTTFSYPEGLFK*IVI---LKNIPFIF 367 F+V N A+ R K MV+NYK +N T D + + NK++L+ ++ + I S F+C+ G WQ +D + L T F+ P+G ++ V+ LK P IF Sbjct: 269 FLVENEAERRRGKKRMVVNYKAMNKATKGDAHNLPNKDELLTLVRGKKIYSSFDCKSGLWQVLLDKESQLLTAFTCPQGHYQWNVVPFGLKQAPSIF 365 The following BLAST results are available for this feature:
BLAST of EY728989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728989 ID=EY728989; Name=EY728989; organism=Citrus sinensis; type=EST; length=900bpback to top |