EY728988

Overview
NameEY728988
Unique NameEY728988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5235 contig Csv1_Contig5235:33..909. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.331e-65
Identity = 126/222 (56.76%), Postives = 157/222 (70.72%), Query Frame = 1
Query:   52 YASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            +A QL+  ++LPM ++   EL + EI+ K GPGA L  SDIA+ L TKN DAP+MLDRILRLLASYS++ CSL        +RLY L SV K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M +++ + +  ILESYKGF+ +  LVDVGG  G  ++ I +KYP IKGINFD PHVI  AP  P
Sbjct:   21 FAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFP 242          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.126e-64
Identity = 122/221 (55.20%), Postives = 161/221 (72.85%), Query Frame = 1
Query:   55 ASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            A +L   ++LPM +++  EL + E++ K GPGA +  S++AAQL T+N DAP+MLDRILRLLASYSV+ C+L      G +RLYSL  V K+   N+DGV +  LL MNQDKVL+ESW  LKDA+LEGGIPFN+A+G+  FEY G DP+FNK FN  M N++++++  ILE Y+GF  ++ +VDVGG  G TL  I +KYP IKGINFD PHVI+ AP +P
Sbjct:   23 AMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYP 243          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.471e-64
Identity = 123/226 (54.42%), Postives = 159/226 (70.35%), Query Frame = 1
Query:   40 QSFAYASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            ++  +A QL   ++LPM ++   EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL        +RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M +++++ +  ILE+YKGF+ +  LVDVGG  G  +  I +KYP IKGINFD PHVI+ AP +P
Sbjct:   18 EAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYP 243          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.922e-64
Identity = 118/228 (51.75%), Postives = 162/228 (71.05%), Query Frame = 1
Query:   34 KRQSFAYASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            + ++F +A QL   ++LPM +++  EL + E++ K G GA +  +++AAQLLT N +A +MLDRILRLL SY+++EC L      G QRLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DP+FNK FN  M N++++ +  ILE+Y GFD ++ +VDVGG  G TL  I +KYP IKGINFD PHV++ AP +P
Sbjct:   14 EEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYP 241          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.278e-64
Identity = 122/226 (53.98%), Postives = 159/226 (70.35%), Query Frame = 1
Query:   40 QSFAYASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            ++  +A QL   ++LPM ++   EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL        +RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDAIL+GGIPFN+A+G+  FEY G DP+FNK FN  M +++++ +  ILE+YKGF+ +  LVDVGG  G  +  I +KYP IKGINFD PHVI+ AP +P
Sbjct:   18 EAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYP 243          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.536e-64
Identity = 124/222 (55.86%), Postives = 156/222 (70.27%), Query Frame = 1
Query:   52 YASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            +A QL+  ++LPM ++   EL + EI+ K GPGA L  SDIA+ L TKN +AP+MLDRILRLLASYS++ CSL        +RLY L SV K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M  ++ + +  ILE+YKGF+ +  LVDVGG  G  ++ I +KYP IKGINFD PHVI  AP  P
Sbjct:   21 FALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFP 242          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.536e-64
Identity = 123/222 (55.41%), Postives = 159/222 (71.62%), Query Frame = 1
Query:   52 YASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLD--ASG-AQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            +A QL   ++LPM ++A  EL + EI+ K GPG  L  +DIA+QL TKN DAP+MLDR+LRLLASYS++  SL   A G  +RLY L  V K+   N++GV + PL  MNQDKVLLESW  LKDA+LEGGIPFN+A+G+  FEY G DP+FNK FN  M +++++ +  ILE+YKGF+ +  +VDVGG  G  L  I +KYP IKGINFD PHVI+ AP +P
Sbjct:   22 FAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYP 243          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.536e-64
Identity = 117/227 (51.54%), Postives = 162/227 (71.37%), Query Frame = 1
Query:   34 KRQSFAYASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPH 705
            + ++  +A  L   ++LPM +++  EL + E++ K GPGA +  S++AAQL T N +AP+MLDRILRLLA+YSV++C L+     G +RLY L  V K+   N DGV + PLL MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DP+FNK FN  M N++++ +  ILE Y+GF+ ++ +VDVGG  G TL  I +KYP IKGINF+ PHV++ AP H
Sbjct:    3 EEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSH 229          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.627e-63
Identity = 119/226 (52.65%), Postives = 159/226 (70.35%), Query Frame = 1
Query:   40 QSFAYASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            ++F +A QL   ++LPM ++A  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+ RLLA+YSV+ C+L        +RLYSL  V K+   N DGV + P+L MNQDKVL+ESW  L DA+L+GG+PFN+A+G+  FEY G DP+FNK FN  M ++T+L +  ILE Y GF+ +  +VDVGG  G T+  I +KYP IKGINFD PHVI  AP +P
Sbjct:   14 EAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSYP 239          
BLAST of EY728988 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.627e-63
Identity = 118/226 (52.21%), Postives = 160/226 (70.80%), Query Frame = 1
Query:   40 QSFAYASQLVMGTMLPMTIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGAQRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHIFEYTGLDPKFNKRFNTAMYNYTSLVLSNILESYKGFDNIQQLVDVGGNLGDTLAAITTKYPYIKGINFDQPHVIDHAPPHP 708
            ++F +A QL   ++LPM +++  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+LRLLA+YSV+ C+L        +RLYSL  V K    N DGV + PLL MNQDKVL+ESW  L DA+L+GG+PFN+A+G+  FEY G DP+FNK FN  M +++++ +  ILE YKGF+ +  +VDVGG  G T+  I +KYP IKGINFD  HVI+ AP +P
Sbjct:   14 EAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYP 239          
The following BLAST results are available for this feature:
BLAST of EY728988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT3_POPKI1.331e-6556.76Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_CATRO1.126e-6455.20Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_POPKI1.471e-6454.42Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT2_OCIBA1.922e-6451.75Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_POPTM3.278e-6453.98Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT2_POPTM9.536e-6455.86Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_PRUDU9.536e-6455.41Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_COFCA9.536e-6451.54Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CAPCH1.627e-6352.65Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CAPAN1.627e-6352.21Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728988 ID=EY728988; Name=EY728988; organism=Citrus sinensis; type=EST; length=876bp
CACGCGTCCGAATGGATCTATAGTTGATGGAGAAAGAGACAAAGCTTTGC
ATATGCTAGTCAATTGGTGATGGGTACAATGCTACCCATGACCATTCAAG
CGGTGTATGAGCTAGGCATTTTCGAGATACTAGACAAAGTTGGTCCTGGT
GCAAAGCTCTGTGCTTCAGATATTGCAGCCCAATTGCTCACCAAGAACAA
AGACGCACCCATGATGCTGGATCGGATTCTCAGGCTTCTGGCTAGCTACA
GTGTTGTTGAATGCTCACTTGATGCTTCTGGTGCTCAGAGACTATATAGT
TTGAATTCTGTCTCCAAATACTATGTGCCTAACAAAGATGGCGTCTTACT
AGGCCCCCTATTACAAATGAATCAGGACAAGGTCCTTCTGGAGAGCTGGT
CCCAACTCAAAGATGCTATTCTTGAAGGAGGAATTCCATTTAATCGAGCC
CATGGAGTGCATATATTTGAGTACACAGGATTGGACCCTAAGTTCAATAA
ACGTTTTAACACAGCAATGTATAACTATACCTCCCTGGTTTTGAGCAACA
TTCTTGAATCTTACAAGGGCTTCGACAACATCCAGCAACTGGTCGATGTT
GGTGGCAATCTCGGCGATACTCTTGCAGCCATCACTACCAAGTACCCCTA
TATTAAGGGCATCAATTTCGACCAGCCTCATGTTATTGACCATGCCCCAC
CACATCCACGTATGATTATTAATCTCATGTCATATATACGAGTACTGGTT
GGGACATNACACTATTATACCCTATGCGGTAACCAGTTTCCTTGCCCTTT
ATTCGAGTGCGACACTCTCATAATTATTATATAGCCGCCCGTGGGCGGGG
GGCGCCCCCGTAGCGACTCTCCCGGG
back to top