EY728983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728983 vs. ExPASy Swiss-Prot
Match: TIG_TRIEI (Trigger factor OS=Trichodesmium erythraeum (strain IMS101) GN=tig PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.008e-14 Identity = 37/137 (27.01%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 52 TKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDIXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDE-SHVQNIPHAETKGFHFDTEDGDKVLPGFLDSISGIQRGET 459 T+F E+ K++ +++ VDV PE K G+ +V+ + L R +G+L + R ++GD+AIVD E E Q +P + + F D ++G + +PGF++ I G++ ET Sbjct: 95 TEFEELVKDFEPGKEMAFSAKVDVEPEAKVEDYKGF-----LVQAEEAKYDSALVDEFLEERRSRMGTLIPIEGRAAEMGDVAIVDFVGIIPSETEGEEAQEVPGGKAQDFQMDLKEG-QFIPGFIEGIVGMKLQET 225 HSP 2 Score: 38.1206 bits (87), Expect = 8.008e-14 Identity = 26/76 (34.21%), Postives = 39/76 (51.32%), Query Frame = 3 Query: 459 KSFRLAFPESWRREHLRGVQAQFTVECRELFYRGLPTLDDSLAGRLLPGCTTIEQVKETLLQK-CREVEQTGKDER 683 K FP + +L G FTV +EL + LP LDD LA + + TI++++E L QK +E E+ K + Sbjct: 226 KEISAQFPSEYSEANLAGKPVVFTVTLKELKEKELPELDDDLA-QEISEFETIDKLREFLEQKFTKEKEEKTKQNK 300
BLAST of EY728983 vs. ExPASy Swiss-Prot
Match: TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.354e-13 Identity = 41/143 (28.67%), Postives = 62/143 (43.36%), Query Frame = 1 Query: 43 RIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDIXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTI-DEDESHVQNIPHAETKGFHFDTEDGDKVLPGFLDSISGIQRGETSPF 468 ++ + F ++ Y + S+ VDV V N YK L E L ++ + L +L V DR Q+GD+AI D + D E IP + + F D E+G K +PGF+D G++ ET F Sbjct: 92 QLKSSFDDLISAYKPGEASSFKAAVDVPATVTLN---SYKGLSFKAEKSE--YDPADLDEFLTQKQRELATLVPVEDRAAQMGDVAIADYEGRYVNDAGEEEEDIIPGTQAEDFSLDLEEG-KFIPGFVDGFVGMKPEETKKF 228 HSP 2 Score: 41.5874 bits (96), Expect = 1.354e-13 Identity = 20/43 (46.51%), Postives = 24/43 (55.81%), Query Frame = 3 Query: 459 KSFRLAFPESWRREHLRGVQAQFTVECRELFYRGLPTLDDSLA 587 K F + FPE + E + G Q FTV +EL R LP LDD A Sbjct: 226 KKFTVTFPEDYGNEEMAGKQVSFTVTLKELKSRELPELDDEFA 268
BLAST of EY728983 vs. ExPASy Swiss-Prot
Match: TIG_PROMM (Trigger factor OS=Prochlorococcus marinus (strain MIT 9313) GN=tig PE=3 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 4.232e-11 Identity = 37/140 (26.43%), Postives = 61/140 (43.57%), Query Frame = 1 Query: 58 FSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDIXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESHVQNIPHAETKGFHFDTEDGDKVLPGFLDSISGIQRGETSPFDSH 477 F + +++ +L+ + DV P K G + VV D + + K L +L V R +GDIA+V S T D+D S ++ + D EDG +++PGF++ I G+ G+ D H Sbjct: 102 FDALLESFQPSEALTLTLETDVTPTPKLKATKGLQAEAEVVTFDPS-----KVDELIEQSRKQLATLVPVESRPAAIGDIAVVSFSGT-YDDDGSAIEG---GSSDSMDVDLEDG-QMIPGFVEGIIGMNLGDEKTVDCH 231 HSP 2 Score: 40.4318 bits (93), Expect = 4.232e-11 Identity = 22/67 (32.84%), Postives = 38/67 (56.72%), Query Frame = 3 Query: 456 DKSFRLAFPESWRREHLRGVQAQFTVECRELFYRGLPTLDDSLAGRLLPGCTTIEQVKETLLQKCRE 656 +K+ FP+ + +E RG +A F + +EL R LP LDD+ A + T+E+++ L Q+ +E Sbjct: 225 EKTVDCHFPDDYSKEDARGRKASFVINLKELKTRELPDLDDAFA-QQSSDKATLEELRNDLEQRLQE 290
BLAST of EY728983 vs. ExPASy Swiss-Prot
Match: TIG_SYNP6 (Trigger factor OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tig PE=3 SV=1) HSP 1 Score: 45.4394 bits (106), Expect = 9.256e-11 Identity = 33/144 (22.92%), Postives = 58/144 (40.28%), Query Frame = 1 Query: 43 RIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDIXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESHVQNIPHAETKGFHFDTEDGDKVLPGFLDSISGIQRGETSPFDS 474 ++ + F + + S S++ VDV P G + VE+ L + K + +L V R +GD+A++D ++ E IP F + E+ D+ +PGF+ I G+ ET D+ Sbjct: 94 QLSSDFETLVAAFQPGKSFSFEASVDVQPTATLAQYTG-----LTVEVAEVPFDANRVDNVLAEQQKQMATLVPVEGRNAAIGDVAVIDFQGILVESGE----EIPGGSGTDFQIEVEE-DRFIPGFISGIVGMAIEETRTVDA 227 HSP 2 Score: 42.3578 bits (98), Expect = 9.256e-11 Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 477 FPESWRREHLRGVQAQFTVECRELFYRGLPTLDDSLAGRLLPGCTTIEQVKETLLQK 647 FPE++ +E + G AQFT+ +EL R LP LDD+ A + TIE++K L ++ Sbjct: 229 FPETYAQEEVAGKAAQFTITLKELKTRDLPELDDAFA-QEASQYETIEELKTALTER 284
BLAST of EY728983 vs. ExPASy Swiss-Prot
Match: TIG_SYNE7 (Trigger factor OS=Synechococcus elongatus (strain PCC 7942) GN=tig PE=3 SV=1) HSP 1 Score: 45.4394 bits (106), Expect = 9.256e-11 Identity = 33/144 (22.92%), Postives = 58/144 (40.28%), Query Frame = 1 Query: 43 RIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDIXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESHVQNIPHAETKGFHFDTEDGDKVLPGFLDSISGIQRGETSPFDS 474 ++ + F + + S S++ VDV P G + VE+ L + K + +L V R +GD+A++D ++ E IP F + E+ D+ +PGF+ I G+ ET D+ Sbjct: 94 QLSSDFETLVAAFQPGESFSFEASVDVQPTATLAQYTG-----LTVEVAEVPFDANRVDNVLAEQQKQMATLVPVEGRNAAIGDVAVIDFQGILVESGE----EIPGGSGTDFQIEVEE-DRFIPGFISGIVGMAIEETRTVDA 227 HSP 2 Score: 42.3578 bits (98), Expect = 9.256e-11 Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 477 FPESWRREHLRGVQAQFTVECRELFYRGLPTLDDSLAGRLLPGCTTIEQVKETLLQK 647 FPE++ +E + G AQFT+ +EL R LP LDD+ A + TIE++K L ++ Sbjct: 229 FPETYAQEEVAGKAAQFTITLKELKTRDLPELDDAFA-QEASQYETIEELKTALTER 284 The following BLAST results are available for this feature:
BLAST of EY728983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728983 ID=EY728983; Name=EY728983; organism=Citrus sinensis; type=EST; length=765bpback to top |