EY728916

Overview
NameEY728916
Unique NameEY728916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSEFS (Elongation factor P OS=Pseudomonas fluorescens (strain SBW25) GN=efp PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.549e-67
Identity = 137/164 (83.54%), Postives = 140/164 (85.37%), Query Frame = -1
Query:  147 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAKK 638
            FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISG             YELNAEDIEAVLPF+EEGMEDVCEAIFFE+RLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKL+NGTELQVA           DTREGGSYKGRAKK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGDTYTFMDTTDYTMYELNAEDIEAVLPFIEEGMEDVCEAIFFEERLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLSNGTELQVADFIEIDDLIEIDTREGGSYKGRAKK 190          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSEU2 (Elongation factor P OS=Pseudomonas syringae pv. syringae (strain B728a) GN=efp PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.093e-64
Identity = 132/163 (80.98%), Postives = 135/163 (82.82%), Query Frame = -1
Query:  150 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAK 638
            FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISG             YELNAEDIE+VLPFVEEGM DVCEA+FFEDRLVSVELPTTIVR+V YTEGSARGDTSGKVMKPAKL NGTEL VA           DTREGGSYKGRAK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGDTYTFMDTSDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFEDRLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGTELSVADFIEIGDMIEIDTREGGSYKGRAK 189          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSE14 (Elongation factor P OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=efp PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.093e-64
Identity = 132/163 (80.98%), Postives = 135/163 (82.82%), Query Frame = -1
Query:  150 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAK 638
            FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISG             YELNAEDIE+VLPFVEEGM DVCEA+FFEDRLVSVELPTTIVR+V YTEGSARGDTSGKVMKPAKL NGTEL VA           DTREGGSYKGRAK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGDTYTFMDTTDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFEDRLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGTELSVADFIEIGDMIEIDTREGGSYKGRAK 189          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSESM (Elongation factor P OS=Pseudomonas syringae pv. tomato GN=efp PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.357e-63
Identity = 130/163 (79.75%), Postives = 135/163 (82.82%), Query Frame = -1
Query:  150 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAK 638
            FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISG             YELNAEDIE+VLPFVEEGM DVCEA+FF++RLVSVELPTTIVR+V YTEGSARGDTSGKVMKPAKL NGTEL VA           DTREGGSYKGRAK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGDTYTFMDTTDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFDERLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGTELSVADFIEIGDMIEIDTREGGSYKGRAK 189          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSEF5 (Elongation factor P OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=efp PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.023e-63
Identity = 129/163 (79.14%), Postives = 133/163 (81.60%), Query Frame = -1
Query:  150 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAK 638
            FTKSGRNSAIMKTKLKNLLTGYKTE VY ADDKLDDVILDRKEATLSFISG             YELNAEDIEAVLPF+EEGM DVCEA+FFEDRLVSV+LPTTIVR+V YTEGSARGDTSGKVMKPAKL NGTEL VA           DTREGGSYKGRAK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTETVYGADDKLDDVILDRKEATLSFISGDTYTFMDTTDYTMYELNAEDIEAVLPFIEEGMTDVCEAVFFEDRLVSVDLPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGTELSVADFIEIGDMIEIDTREGGSYKGRAK 189          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSEPF (Elongation factor P OS=Pseudomonas fluorescens (strain Pf0-1) GN=efp PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.500e-62
Identity = 129/163 (79.14%), Postives = 132/163 (80.98%), Query Frame = -1
Query:  150 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAK 638
            FTKSGRNSAIMKTKLKNLLTGYKTE VY ADDKLDDVILDRKEATLSFISG             YELNAEDIE+VLPFVEEGM DVCEA+FFE RLVSVELPTTIVR+V YTEGSARGDTSGKVMKPAKL NGTEL VA           DTREGGSYKGRAK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTETVYGADDKLDDVILDRKEATLSFISGDSYTFMDTTDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFEGRLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGTELSVADFIEIGDMIEIDTREGGSYKGRAK 189          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSEPK (Elongation factor P OS=Pseudomonas putida (strain KT2440) GN=efp PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.006e-58
Identity = 122/164 (74.39%), Postives = 131/164 (79.88%), Query Frame = -1
Query:  147 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAKK 638
            FTKSGRNSAIMKTKLKNLLTGYKTE VY ADDKLDDVILDRKEATLSFI+G             YELNAEDIEAVLP++EEGMEDVCEA+FFE RLVSVELPTTI RKV YTE +ARGDTSGKVMKPAKLANGTE+ VA           DTR+  S+KGR+KK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTETVYGADDKLDDVILDRKEATLSFINGDEYTFMDTTDYTMYELNAEDIEAVLPYIEEGMEDVCEAVFFEGRLVSVELPTTISRKVVYTENAARGDTSGKVMKPAKLANGTEISVADFIQIDEWIDIDTRD-NSFKGRSKK 189          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSEP1 (Elongation factor P OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=efp PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.006e-58
Identity = 122/164 (74.39%), Postives = 131/164 (79.88%), Query Frame = -1
Query:  147 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAKK 638
            FTKSGRNSAIMKTKLKNLLTGYKTE VY ADDKLDDVILDRKEATLSFI+G             YELNAEDIEAVLP++EEGMEDVCEA+FFE RLVSVELPTTI RKV YTE +ARGDTSGKVMKPAKLANGTE+ VA           DTR+  S+KGR+KK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTETVYGADDKLDDVILDRKEATLSFINGDEYTFMDTTDYTMYELNAEDIEAVLPYIEEGMEDVCEAVFFEGRLVSVELPTTISRKVVYTENAARGDTSGKVMKPAKLANGTEISVADFIQIDEWIDIDTRD-NSFKGRSKK 189          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSEPW (Elongation factor P OS=Pseudomonas putida (strain W619) GN=efp PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.824e-58
Identity = 120/164 (73.17%), Postives = 131/164 (79.88%), Query Frame = -1
Query:  147 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAKK 638
            FTKSGRNSAIMKTKLKNLLTGYKTE VY ADDKLDDVILDRKEATLSFISG             YELNAEDI+AVLP++EEGMED+CEA+FFE RLVSVELPTTI R+V YTE +ARGDTSGKVMKPAKL NGTE+QVA           DTR+  S+KGR+KK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTETVYGADDKLDDVILDRKEATLSFISGDSYTFMDTTDYTMYELNAEDIDAVLPYIEEGMEDICEAVFFEGRLVSVELPTTISRQVVYTENAARGDTSGKVMKPAKLKNGTEIQVADFIQIDEWIDIDTRD-NSFKGRSKK 189          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_PSEPG (Elongation factor P OS=Pseudomonas putida (strain GB-1) GN=efp PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.824e-58
Identity = 120/164 (73.17%), Postives = 131/164 (79.88%), Query Frame = -1
Query:  147 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAKK 638
            FTKSGRNSAIMKTKLKNLLTGYKTE VY ADDKLDDVILDRKEATLSFISG             YELNAEDI+AVLP++EEGMED+CEA+FFE RLVSVELPTTI R+V YTE +ARGDTSGKVMKPAKL NGTE+QVA           DTR+  S+KGR+KK
Sbjct:   27 FTKSGRNSAIMKTKLKNLLTGYKTETVYGADDKLDDVILDRKEATLSFISGDSYTFMDTTDYTMYELNAEDIDAVLPYIEEGMEDICEAVFFEGRLVSVELPTTISRQVVYTENAARGDTSGKVMKPAKLKNGTEIQVADFIQIDEWIDIDTRD-NSFKGRSKK 189          
The following BLAST results are available for this feature:
BLAST of EY728916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
EFP_PSEFS1.549e-6783.54Elongation factor P OS=Pseudomonas fluorescens (st... [more]
EFP_PSEU22.093e-6480.98Elongation factor P OS=Pseudomonas syringae pv. sy... [more]
EFP_PSE142.093e-6480.98Elongation factor P OS=Pseudomonas syringae pv. ph... [more]
EFP_PSESM1.357e-6379.75Elongation factor P OS=Pseudomonas syringae pv. to... [more]
EFP_PSEF53.023e-6379.14Elongation factor P OS=Pseudomonas fluorescens (st... [more]
EFP_PSEPF1.500e-6279.14Elongation factor P OS=Pseudomonas fluorescens (st... [more]
EFP_PSEPK1.006e-5874.39Elongation factor P OS=Pseudomonas putida (strain ... [more]
EFP_PSEP11.006e-5874.39Elongation factor P OS=Pseudomonas putida (strain ... [more]
EFP_PSEPW3.824e-5873.17Elongation factor P OS=Pseudomonas putida (strain ... [more]
EFP_PSEPG3.824e-5873.17Elongation factor P OS=Pseudomonas putida (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728916 ID=EY728916; Name=EY728916; organism=Citrus sinensis; type=EST; length=674bp
CGGCCCACCAGGTCTGCCCGTACTCCAACGCCACCCGTGGCAACGTCGAT
GTGCGCCTGCACGTGACCGTTTGATCCAAACCGCGCCCACAAAAAAGCCC
GACTCATGGTCGGGCTTTTTTTGTCGTACCGGTGGCGCAAGAATTACTTC
TTGGCGCGACCTTTGTACGAACCACCTTCACGGGTGTCGATCTCGATCAG
GTCGTCGATTTCGATGAAATCGGCCACTTGCAGTTCGGTACCGTTAGCCA
GTTTGGCAGGCTTCATCACCTTGCCCGAAGTGTCGCCGCGAGCGGAACCT
TCGGTGTAGGCAACCTTACGCACGATAGTGGTCGGCAGCTCTACGGAAAC
CAGACGGTCTTCGAAGAAGATAGCTTCGCAGACGTCTTCCATGCCTTCTT
CCACGAATGGCAGAACGGCTTCGATGTCTTCAGCGTTCAGCTCGTACATG
GTGTAGTCGGTGGTGTCCATGAACGTGTAGGTGTCGCCGCTGATGAAGGA
CAGGGTCGCTTCTTTGCGGTCGAGGATCACGTCGTCCAGTTTGTCATCGG
CGCTGTAGACGATCTCGGTCTTGTAACCGGTCAGCAGGTTCTTCAGCTTG
GTCTTCATGATTGCGCTGTTACGACCAGACTTGGTGAATCAGCTTTCTGA
ACCACCAAGGTCGGCTAAGATTGC
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