EY728849

Overview
NameEY728849
Unique NameEY728849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728849 vs. ExPASy Swiss-Prot
Match: ACD11_CHICK (Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus GN=ACAD11 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.121e-17
Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = -1
Query:   67 MALNDQSTQIRPGEELDASLIDPYLKAHIPGL----SGNVKISQFPGGASNLTYLLEYPGQEFVLRRPPFGHKAKSAHDMGREYRILNQL-KDGFPYCPKAYVHCTDESVIGAEFYVMERVNGIILRSDLPPELG 456
            MA+   ++++R     D   ++ YL   +PG     +G + + Q+  G SN T+ L+  GQ +VLR+ P G    +AH + REY +   L   GFP  P+  ++C+D SVIG EFYVM+ V G I R    PE+G
Sbjct:    1 MAVEPGTSEVRRQHRFDQGSLERYLCRCLPGFPQQPAGALSVRQYSSGQSNPTFYLQKGGQAYVLRKKPHGPLLPNAHKVDREYHVQKALFSAGFPV-PEPLLYCSDVSVIGTEFYVMQHVQGRIFRDASLPEVG 134          
BLAST of EY728849 vs. ExPASy Swiss-Prot
Match: ACD11_RAT (Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus GN=Acad11 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.953e-17
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = -1
Query:    4 ISMALNDQSTQIRPGEELDASLIDPYLKAHIPGLSGN----VKISQFPGGASNLTYLLEYPGQEFVLRRPPFGHKAKSAHDMGREYRILNQLKD-GFPYCPKAYVHCTDESVIGAEFYVMERVNGIILRSDLPPELGLDATKTEALCKSFIDKFVELH 462
            + M +   + ++ P  + D   ++ YL  H+PG   +    + ++Q+  G SN T+ L+   Q +VLR+ P G     AH + RE+++   L   GFP  PK  ++C++ S+IG EFYVME V G I R    P  G+   +  A+  S ++    LH
Sbjct:    1 MEMDVTRDTVEVLPQHKFDIRSLEAYLNQHLPGFGSDHRAVLTVTQYRSGQSNPTFFLQKGSQAYVLRKKPPGSLLPKAHKIDREFKVQKALFSVGFPV-PKPLLYCSNASIIGTEFYVMEHVQGRIFRDFSIP--GVSPAERAAIYVSLVETLAWLH 155          
BLAST of EY728849 vs. ExPASy Swiss-Prot
Match: ACD11_PONAB (Acyl-CoA dehydrogenase family member 11 OS=Pongo abelii GN=ACAD11 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.186e-16
Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = -1
Query:    4 QIRPGEELDASLIDPYLKAHIPGLSGN----VKISQFPGGASNLTYLLEYPGQEFVLRRPPFGHKAKSAHDMGREYRILNQLKD-GFPYCPKAYVHCTDESVIGAEFYVMERVNGIILRSDLPPELGLDATKTEALCKSFIDKFVELH 432
            ++ P  + D+  ++ YL  H+ G        + I+Q+  G SN T+ L+   Q +VLR+ P G     AH + RE+++   L   GFP  PK  ++C+D SVIG EFY+ME V G I R    P  G+   +  AL  + ++   +LH
Sbjct:   13 EVLPQHKFDSKSLEAYLNQHLSGFGAEREATLTIAQYRAGKSNPTFYLQKGFQTYVLRKKPPGSLLPKAHQIDREFKVQKALFSIGFPV-PKPILYCSDTSVIGTEFYIMEHVQGRIFRDLTIP--GVSPAERSALYVAIVETLAQLH 157          
BLAST of EY728849 vs. ExPASy Swiss-Prot
Match: ACD11_MOUSE (Acyl-CoA dehydrogenase family member 11 OS=Mus musculus GN=Acad11 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.507e-16
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = -1
Query:    4 LNDQSTQIRPGEELDASLIDPYLKAHIPGLSGNVK----ISQFPGGASNLTYLLEYPGQEFVLRRPPFGHKAKSAHDMGREYRILNQL-KDGFPYCPKAYVHCTDESVIGAEFYVMERVNGIILRSDLPPELGLDATKTEALCKSFIDKFVELH 450
            +   + ++ P  + D   ++ YL  H+PG   + +    ++Q+  G SN T+ L+   Q +VLR+ P G     AH + RE++I   L   GFP   K  ++C D SVIG EFYVME V G I R    P  G+ + +  A+  S  +    LH
Sbjct:    5 VTSDTVEVLPQHKFDLRSLEAYLNQHLPGFGSDSRAVLTVTQYRSGQSNPTFFLQKGSQAYVLRKKPPGSLLPKAHKIDREFKIQKALFSIGFPVA-KPLLYCRDASVIGTEFYVMEHVQGRIFRDFSIP--GVSSAERAAIYVSVAETLAWLH 155          
BLAST of EY728849 vs. ExPASy Swiss-Prot
Match: ACD11_HUMAN (Acyl-CoA dehydrogenase family member 11 OS=Homo sapiens GN=ACAD11 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.004e-15
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = -1
Query:    7 QIRPGEELDASLIDPYLKAHIPGLSGN----VKISQFPGGASNLTYLLEYPGQEFVLRRPPFGHKAKSAHDMGREYRILNQLKD-GFPYCPKAYVHCTDESVIGAEFYVMERVNGIILRSDLPPELGLDATKTEALCKSFIDKFVEL 432
            ++ P  + D+  ++ YL  H+ G        + I+Q+  G SN T+ L+   Q +VLR+ P G     AH + RE+++   L   GFP  PK  ++C+D SVIG EFYVME V G I R    P  GL   +  A+  + ++   +L
Sbjct:   13 EVLPQHKFDSKSLEAYLNQHLSGFGAEREATLTIAQYRAGKSNPTFYLQKGFQTYVLRKKPPGSLLPKAHQIDREFKVQKALFSIGFPV-PKPILYCSDTSVIGTEFYVMEHVQGRIFRDLTIP--GLSPAERSAIYVATVETLAQL 156          
BLAST of EY728849 vs. ExPASy Swiss-Prot
Match: ACD10_MOUSE (Acyl-CoA dehydrogenase family member 10 OS=Mus musculus GN=Acad10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12
Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = -1
Query:    4 IRPGEELDASLIDPYLKAHIPGLS-GNVKISQFPGGASNLTYLLEYPGQEFVLRRPPFGHKAKSAHDMGREYRILNQLKDGFPYCPKAYVHCTDESVIGAEFYVMERVNGIILRSDLPPELGLDATKTEALCKSFIDKFVELH 429
            +R    +    ++ YLK  +   S G +++ QF  G SN TY +    ++ VLR+ P G    SAH + RE+RI+  L +     P     C D S+IG  FY+ME   GII +    P  GL+ ++ EA+  +       +H
Sbjct:  259 VRKTMAIPQDALEKYLKGLLGTHSTGPMELLQFDHGQSNPTYYIRLADRQLVLRKKPSGTLLPSAHAIEREFRIMKALANAGVPVPTVLDLCEDSSIIGTPFYLMEYCPGIIYKDPSLP--GLEPSRREAIYTAMNQVLCRIH 399          
BLAST of EY728849 vs. ExPASy Swiss-Prot
Match: ACD10_HUMAN (Acyl-CoA dehydrogenase family member 10 OS=Homo sapiens GN=ACAD10 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.701e-11
Identity = 45/139 (32.37%), Postives = 69/139 (49.64%), Query Frame = -1
Query:    4 ELDASLIDPYLKAHIPGL--SGNVKISQFPGGASNLTYLLEYPGQEFVLRRPPFGHKAKSAHDMGREYRILNQLKDGFPYCPKAYVHCTDESVIGAEFYVMERVNGIILRSDLPPELGLDATKTEALCKSFIDKFVELH 414
            E+    +  YLK  + G+  +G +++ QF  G SN TY +    ++ VLR+ P G    SAH + RE+RI+  L +     P     C D SVIG  FYVME   G+I +    P  GL+ +   A+  +      ++H
Sbjct:  264 EIPKDSLQKYLK-DLLGIQTTGPLELLQFDHGQSNPTYYIRLANRDLVLRKKPPGTLLPSAHAIEREFRIMKALANAGVPVPNVLDLCEDSSVIGTPFYVMEYCPGLIYKDPSLP--GLEPSHRRAIYTAMNTVLCKIH 399          
The following BLAST results are available for this feature:
BLAST of EY728849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ACD11_CHICK3.121e-1737.04Acyl-CoA dehydrogenase family member 11 OS=Gallus ... [more]
ACD11_RAT6.953e-1731.65Acyl-CoA dehydrogenase family member 11 OS=Rattus ... [more]
ACD11_PONAB1.186e-1633.78Acyl-CoA dehydrogenase family member 11 OS=Pongo a... [more]
ACD11_MOUSE4.507e-1633.12Acyl-CoA dehydrogenase family member 11 OS=Mus mus... [more]
ACD11_HUMAN1.004e-1534.01Acyl-CoA dehydrogenase family member 11 OS=Homo sa... [more]
ACD10_MOUSE6.735e-1231.47Acyl-CoA dehydrogenase family member 10 OS=Mus mus... [more]
ACD10_HUMAN5.701e-1132.37Acyl-CoA dehydrogenase family member 10 OS=Homo sa... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-D05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728849 ID=EY728849; Name=EY728849; organism=Citrus sinensis; type=EST; length=510bp
CTGGTGCAGCTCGACAAACTTGTCAATAAAGCTTTTGCACAAGGCTTCGG
TTTTCGTCGCGTCCAGGCCCAGTTCCGGCGGCAGGTCCGAGCGCAGGATG
ATCCCGTTGACCCGCTCCATCACGTAGAACTCGGCGCCGATCACCGACTC
GTCGGTGCAATGCACGTAGGCCTTGGGGCAATACGGGAAACCGTCCTTGA
GCTGGTTGAGAATCCGGTATTCGCGGCCCATGTCGTGGGCGGACTTGGCC
TTGTGGCCAAAGGGCGGGCGACGCAGCACGAATTCCTGGCCGGGGTATTC
CAGCAGGTACGTCAGGTTCGAGGCACCACCCGGGAACTGGCTGATTTTGA
CGTTGCCGCTCAAGCCCGGGATATGGGCCTTGAGGTAGGGATCGATGAGG
CTGGCATCAAGTTCTTCGCCGGGGCGAATCTGGGTCGATTGGTCATTAAG
CGCCATGCTTATCCCTTCTGCTTATTCTTAAGGCCTTGGACTATTGGCTA
ATCTAATGTG
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