EY728814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728814 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 1.023e-46 Identity = 97/172 (56.40%), Postives = 119/172 (69.19%), Query Frame = 1 Query: 70 PLSID*VSTATKGNHFGLSGNKSLAAVSXNSMYWPNRAENVTESFAPVVNKECSEKRQGNGNTCRLFGIQLVDNSNVEKASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLRSPHESQSRQIQSCTKVHMQGIAVGRAVDLTRLGCYEELSQKL 585 P S+ S K FG GNKS VS S +WP A++ ESFA N E +EK+Q NGN CRLFG +LV+N NV++ A ++SGA+ D+ +P + DS Q SEP NIN+SD+PS S D EKS LRSP ESQSRQI+SCTKVHMQG AVGRA+DLTR CYE+L +KL Sbjct: 403 PSSVPLFSPPAKAATFGHGGNKSFG-VSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKL 573
BLAST of EY728814 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.389e-27 Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 118 GLSGNKSLAAVSXNSMYWPNRAENVTESFAPVVNKECSEKRQGNGNT-CRLFGIQLVDNSNVEKASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLRSPHESQSRQIQSCTKVHMQGIAVGRAVDLTRLGCYEELSQKL 585 G S +A+S YWP R E S++ ++K SEK+Q + CRLFGI++ +S VE SP +SG +G D+ +DA+SDQ S+PS+ N+SD P+ S + SPHE+QSRQ++SCTKV MQG+AVGRAVDLTRL Y++L KL Sbjct: 433 GFSTKNEPSALSNKHFYWPMR-ETRANSYSASISKVPSEKKQEPSSAGCRLFGIEI--SSAVEATSPLAAVSG-VGQDQPAASVDAESDQLSQPSHANKSDAPAASSEP------SPHETQSRQVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKL 579
BLAST of EY728814 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27 Identity = 74/153 (48.37%), Postives = 101/153 (66.01%), Query Frame = 1 Query: 130 NKSLAAVSXNSMYWPNRAENVTESFAPVVNKECSEKRQGNGNT-CRLFGIQLVDNSNVEKASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLRSPHESQSRQIQSCTKVHMQGIAVGRAVDLTRLGCYEELSQKL 585 +K+ ++ N YW R ++ T+SF+ NK E++Q CRLFGI++ +S VE+A PA T+SG +G D+ + +D DSDQ S+PSN N+SD P S + RSP ESQSRQ++SCTKV MQG+AVGRAVDLT+L Y +L KL Sbjct: 436 SKNEPSILSNQFYWSMR-DSKTDSFSASTNKTRVERKQEPTTMGCRLFGIEI--SSAVEEALPAATVSG-VGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSE------RSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKL 578 The following BLAST results are available for this feature:
BLAST of EY728814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728814 ID=EY728814; Name=EY728814; organism=Citrus sinensis; type=EST; length=858bpback to top |