EY728715

Overview
NameEY728715
Unique NameEY728715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11773 contig Csv1_Contig11773:1..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SERP5 (Probable phosphoglycerate mutase gpmB OS=Serratia proteamaculans (strain 568) GN=gpmB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L   G  QA  VA+R++K+  I+ + +SDL R   TAQ IA  C G +VI DP LRE H+G L+  +            +  + G  D  IP  GES+ +L  R   AL+       G +  +V+HG
Sbjct:    3 QVYLVRHGETEWNAARRIQGQSDSPLTANGEHQARLVAQRVSKQ-GITHVITSDLGRTRRTAQIIAEAC-GCEVINDPRLRELHMGVLEERLIDSLTPQEEQWRKQMVDGTADGRIP-QGESMSELGDRMREALESCLMLPEGSKPLIVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_ESCF3 (Probable phosphoglycerate mutase gpmB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gpmB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.785e-17
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ VA R AKE  I+ I SSDL R   TA+ IA  C G  ++ DP LRE ++G L+        +      +  ++G  D  IP  GES+ +L  R  SAL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDILLDPRLRELNMGVLETRNIDSLTEEEENWRRQLVNGTKDGRIP-QGESMLELSERMHSALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERE8 (Probable phosphoglycerate mutase gpmB OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gpmB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L  VG  QA  VA+R+  +  I+ I +SDL R  +TA+ IA+ C GLKV+ DP LRE ++G L+               +  ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVFLVRHGETVWNASRQIQGQSDSPLTAVGERQAHLVAQRVRSQ-GITHIITSDLGRTQQTAKIIADAC-GLKVVTDPRLRELNMGVLETRPIESLTPEEEQWRKQMINGTEGGRIP-EGESMAELGRRMRAALDSCLELPAGSKPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_PHOLL (Probable phosphoglycerate mutase gpmB OS=Photorhabdus luminescens subsp. laumondii GN=gpmB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGE+ WN   ++QGQ D  L E G  QA  VA+R+  E  I+ I +SDL R   TA+ IA  C G ++I +P LRE H+G L+               +  L G     IP  GES+D+L  R  +AL+      +G R  +V+HG
Sbjct:    3 QVYLVRHGESEWNAARRIQGQSDSPLTETGEHQARLVAQRVKSE-SITHIITSDLGRTRRTAEIIAKVC-GCEIILEPRLRELHMGVLERRNIDSLTSEEEKWRKKVLDGTPGGRIP-KGESMDELAVRMRAALENCRNLPVGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SHISS (Probable phosphoglycerate mutase gpmB OS=Shigella sonnei (strain Ss046) GN=gpmB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.734e-16
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ VA R AKE  I+ I SSDL R   TA+ IA  C G  +I D  LRE ++G L+        +      +  ++G  D  IP  GES+ +L  R  +AL+       G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SHIFL (Probable phosphoglycerate mutase gpmB OS=Shigella flexneri GN=gpmB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.734e-16
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ VA R AKE  I+ I SSDL R   TA+ IA  C G  +I D  LRE ++G L+        +      +  ++G  D  IP  GES+ +L  R  +AL+       G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SHIF8 (Probable phosphoglycerate mutase gpmB OS=Shigella flexneri serotype 5b (strain 8401) GN=gpmB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.734e-16
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ VA R AKE  I+ I SSDL R   TA+ IA  C G  +I D  LRE ++G L+        +      +  ++G  D  IP  GES+ +L  R  +AL+       G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SHIBS (Probable phosphoglycerate mutase gpmB OS=Shigella boydii serotype 4 (strain Sb227) GN=gpmB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.734e-16
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ VA R AKE  I+ I SSDL R   TA+ IA  C G  +I D  LRE ++G L+        +      +  ++G  D  IP  GES+ +L  R  +AL+       G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SHIB3 (Probable phosphoglycerate mutase gpmB OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=gpmB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.734e-16
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ VA R AKE  I+ I SSDL R   TA+ IA  C G  +I D  LRE ++G L+        +      +  ++G  D  IP  GES+ +L  R  +AL+       G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_ECOUT (Probable phosphoglycerate mutase gpmB OS=Escherichia coli (strain UTI89 / UPEC) GN=gpmB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.734e-16
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ VA R AKE  I+ I SSDL R   TA+ IA  C G  +I D  LRE ++G L+        +      +  ++G  D  IP  GES+ +L  R  +AL+       G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLETRNIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
The following BLAST results are available for this feature:
BLAST of EY728715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GPMB_SERP55.961e-1737.50Probable phosphoglycerate mutase gpmB OS=Serratia ... [more]
GPMB_ESCF37.785e-1738.82Probable phosphoglycerate mutase gpmB OS=Escherich... [more]
GPMB_YERE81.017e-1637.50Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_PHOLL1.017e-1637.50Probable phosphoglycerate mutase gpmB OS=Photorhab... [more]
GPMB_SHISS1.734e-1638.16Probable phosphoglycerate mutase gpmB OS=Shigella ... [more]
GPMB_SHIFL1.734e-1638.16Probable phosphoglycerate mutase gpmB OS=Shigella ... [more]
GPMB_SHIF81.734e-1638.16Probable phosphoglycerate mutase gpmB OS=Shigella ... [more]
GPMB_SHIBS1.734e-1638.16Probable phosphoglycerate mutase gpmB OS=Shigella ... [more]
GPMB_SHIB31.734e-1638.16Probable phosphoglycerate mutase gpmB OS=Shigella ... [more]
GPMB_ECOUT1.734e-1638.16Probable phosphoglycerate mutase gpmB OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728715 ID=EY728715; Name=EY728715; organism=Citrus sinensis; type=EST; length=813bp
CCACGCGTCCGAAAAATCCCAAAACATTTCTGCGCGGAATCGGAACGGAT
TCAGAGGCACTCAAAACCCGGGAACATGGCCGAGTCAACGGAGTCTCCAG
CAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTGATTATTGTGAGATC
ATTGTGGTGCGTCACGGTGAAACGCCTTGGAACGTTCAAGGAAAAGTTCA
GGGGCAGTTAGATGTTGAATTGAATGAAGTTGGAAGAGAGCAAGCTGTTT
CTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTTCTGTTATCTATTCT
TCTGACCTGAAGCGAGCACTCGAAACTGCACAGACAATTGCAAACAGATG
TGGTGGGCTAAAGGTCATTGAAGATCCTGAACTAAGGGAAAGACATCTTG
GAGATCTTCAAGGCCTTGTTTTCCGTGAAGCAGCCAAAGTCTGTCCTATA
GCATATCAAGCATTTTTATCTGGCAAGACAGATCAAGATATCCCTGGTGG
TGGAGAAAGTCTTGATCAACTTTATCGACGGTGCACGTCTGCATTGCAGA
GAATTGCTAGGAAGCATATAGGAGAGCGAATANTAGTTGTGACTCATGGT
GGTGTAATCAGAACACTCTACCAACGGGCTTGCCCAAACAAAAAGCCTGA
AGGTAAGGTCCTGAATACTCTATCAACATATTTAGGTTGACTGAAAAAAC
AAGTGGGTCTTAAAAACTGGGGTGATGTTAGTCATCTCACCCAACAGGAT
TCTAAAGTCTGGTTTTGGTGGGGACTCACTTCCTGGTTATTCTGGGGCGG
GGCTCTGATGTGG
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