EY728528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728528 vs. ExPASy Swiss-Prot
Match: SF3A1_ARATH (Probable splicing factor 3 subunit 1 OS=Arabidopsis thaliana GN=At1g14650 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 9.935e-35 Identity = 87/181 (48.07%), Postives = 106/181 (58.56%), Query Frame = 3 Query: 135 ILTLPAXXXXXXXXXXXXXQVSEKYTQEKPSNEEQTNANAAP-ASVATHTRTIGIIHPPPDIRNIVDKTAQFVAKNGPEFEKRIIXXXXXXXKFNFLTSSDPYHAYYQHRLSEFRAQNQSSAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXKTEPAL--PFKLPVQNVLEPPEPEHYTVRV 668 IL L A Q++++ +E+ EQ N+N AP A+VATHTRTIGIIHPPPDIR IV+KTAQFV+KNG EFEKRII KFNFL SSDPYHA+YQH+L+E+RAQN+ AQ T+P L F++P LE PEPE YTVR+ Sbjct: 7 ILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPPDIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKDGAQ----GTDDSDGTTDPQLDTGAADESEAGDTQPDLQAQFRIP-SKPLEAPEPEKYTVRL 182
BLAST of EY728528 vs. ExPASy Swiss-Prot
Match: SF3A1_MOUSE (Splicing factor 3 subunit 1 OS=Mus musculus GN=Sf3a1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.293e-20 Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 210 TQEKPSNEEQTNANAAPASVATHTRTIGIIHPPPDIRNIVDKTAQFVAKNGPEFEKRIIXXXXXXXKFNFLTSSDPYHAYYQHRLSEF---RAQNQSSA 497 T+ K EE+ ++ P +GII+PPP++RNIVDKTA FVA+NGPEFE RI KFNFL +DPYHAYY+H++SEF +AQ S+A Sbjct: 17 TESKQPIEEEASSKEDPTPSKP---VVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAA 112
BLAST of EY728528 vs. ExPASy Swiss-Prot
Match: SF3A1_HUMAN (Splicing factor 3 subunit 1 OS=Homo sapiens GN=SF3A1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.293e-20 Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 3 Query: 210 TQEKPSNEEQTNA--NAAPASVATHTRTIGIIHPPPDIRNIVDKTAQFVAKNGPEFEKRIIXXXXXXXKFNFLTSSDPYHAYYQHRLSEF---RAQNQSSA 497 T+ K EE+ ++ ++AP+ +GII+PPP++RNIVDKTA FVA+NGPEFE RI KFNFL +DPYHAYY+H++SEF +AQ S+A Sbjct: 17 TEPKQPTEEEASSKEDSAPSKPV-----VGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAA 112
BLAST of EY728528 vs. ExPASy Swiss-Prot
Match: SF3A1_BOVIN (Splicing factor 3 subunit 1 OS=Bos taurus GN=SF3A1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.179e-19 Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 3 Query: 216 EKPSNEEQTNANAAPASVATHTRTIGIIHPPPDIRNIVDKTAQFVAKNGPEFEKRIIXXXXXXXKFNFLTSSDPYHAYYQHRLSEF---RAQNQSSA 497 ++P+ EE ++ + S +GII+PPP++RNIVDKTA FVA+NGPEFE RI KFNFL +DPYHAYY+H++SEF +AQ S+A Sbjct: 20 KQPTEEEASSKEDSTPSKPV----VGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAA 112
BLAST of EY728528 vs. ExPASy Swiss-Prot
Match: SA114_SCHPO (Pre-mRNA-splicing factor sap114 OS=Schizosaccharomyces pombe GN=sap114 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.649e-13 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 3 Query: 291 GIIHPPPDIRNIVDKTAQFVAKNGPEFEKRIIXXXXXXXKFNFLTSSDPYHAYYQHRLSEFR 476 G+I PPP IR I+DK+A +VA+NGP FE++I KF FL ++DPYH YYQH+L+E R Sbjct: 33 GVILPPPAIREIIDKSASYVARNGPAFEEKIRQNEQANTKFAFLHANDPYHPYYQHKLTEAR 94 The following BLAST results are available for this feature:
BLAST of EY728528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728528 ID=EY728528; Name=EY728528; organism=Citrus sinensis; type=EST; length=914bpback to top |