EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACSK (Ribosome-recycling factor OS=Bacillus clausii (strain KSM-K16) GN=frr PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.258e-25 Identity = 61/137 (44.53%), Postives = 89/137 (64.96%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +K ++M+ AI LSREL KLR GRA+P +LD + VE G + PLN LA V+V +++ L I PYD + +E AI+ S LGL P DGQ + AIP LT+E + + ++V+KT+E+ K ++R R+ A D +KK Sbjct: 5 IKADAKTRMDKAIDVLSRELAKLRAGRANPALLDRVTVEYYGAQTPLNQLASVTVPEARLLLITPYDKTAVASIEKAILKSDLGLTPSNDGQVIRIAIPPLTEERRKDLVRLVSKTAEESKVAVRNIRRDANDELKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACHD (Ribosome-recycling factor OS=Bacillus halodurans GN=frr PE=3 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.788e-23 Identity = 61/148 (41.22%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +M A AL REL KLR GRA+P MLD I VE G + PLN LA +SV +++ L I P+D +++ ++E AI S LGL P DG + IP LT+E + + K+V K++E+ K ++R R+ A D +KK L D ++R+ ++ Sbjct: 12 RMTKATEALGRELAKLRAGRANPAMLDRITVEYYGAETPLNQLATISVPEARLLVIQPFDKSSISDIERAIQKSDLGLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEAKVAVRNIRRDANDDLKKRQKDGELTEDDLRRVTED 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOKA (Ribosome-recycling factor OS=Geobacillus kaustophilus GN=frr PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.335e-23 Identity = 56/130 (43.08%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +M+ A+ A +REL +R GRA+ G+L+ + V+ GV P+N LA +SV +++ L I PYD + +KE+E AI++S LGL P DG + IP LT+E + + K+V K SED K ++R R+ A D +KK Sbjct: 12 KMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLLVIQPYDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAKVAVRNIRRDANDELKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_PELCD (Ribosome-recycling factor OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=frr PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.049e-23 Identity = 59/152 (38.82%), Postives = 91/152 (59.87%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESAD 759 S M+ A+ +L +++TK+RTGRAS +LD ++V+ G PLN + ++V + + ++I P++ L ++E AI + LGLNP DG + IP +T+E + M KVV K ED K +R +R+ A D MKK + D +KR EKE D Sbjct: 11 SGMDKAVESLKKDMTKVRTGRASTSLLDDVMVDYYGTPTPLNQVGTLAVPEPRLITIQPWEKKLLADIERAIFKADLGLNPTSDGNLIRLVIPPMTEERRKEMGKVVRKMGEDAKVGVRSARRDANDGMKKLEKNKEISEDDLKRGEKEIQD 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DEHE1 (Ribosome-recycling factor OS=Dehalococcoides ethenogenes (strain 195) GN=frr PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.049e-23 Identity = 60/151 (39.74%), Postives = 95/151 (62.91%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSS--LPXDSMKR 738 + + + +M A++ LS+EL+ +RTGR+SP +++HI VE GV P+NHLA ++ D + ++I P+D + L +E AI+ S LGL P DG + IP L++E Q M K+V+K E+ K ++R R+ A+D MKK S + D +KR Sbjct: 5 ILQKSEKKMAASLDVLSQELSGIRTGRSSPALVEHIKVEYAGVPTPINHLASIAAPDPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVSKRLEEDKIAMRNVRRDAMDEMKKLEKSKEISQDDLKR 155
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CLOTE (Ribosome-recycling factor OS=Clostridium tetani GN=frr PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.049e-23 Identity = 61/153 (39.87%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSSLPXDSMKRLEKE 750 + T +M A++AL ++L L+ GRA+P MLD I E G PL+ LA +SV +++ L I P+D ++LK +E AI+ S LGLNP DG + IP LT+E + + K V K ED K +IR R+ D +K S + D +K+ E+E Sbjct: 5 IMNTAEDKMSKALLALKKDLASLKAGRANPAMLDKIEAEYYGTMTPLSQLANISVPEARILQIQPWDKSSLKAIEKAILVSDLGLNPNNDGTIIRLIIPELTEETRRNIVKTVKKYGEDTKIAIRSVRRDGNDKIKDLKSDMSEDDIKKAEEE 157
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DESVM (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=frr PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.982e-23 Identity = 63/153 (41.18%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESADDI 765 +ME A+ +L RE KLRTGRAS ++D+I V+ G P++ LA VSV DS+TL+I P+D + + +E AI+ S LGLNP DG+ + +IP LT+E + + KV K +E+ K ++R R+ A D +KK G + D +++ S DD+ Sbjct: 13 RMEKALGSLDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSVPDSRTLTIQPWDRSAFQLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARKYTEEAKVAVRNVRRDANDALKKLEKGKEISEDDVRK----STDDV 161
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CLOAB (Ribosome-recycling factor OS=Clostridium acetobutylicum GN=frr PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.982e-23 Identity = 66/159 (41.51%), Postives = 93/159 (58.49%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK--KAGSSLPXDSMKRLEKE 750 I +KE +M +I AL +ELT ++ GRA+P MLD I V+ G PLN LA +SV +S+ L I P+D + +K +E AI+ S LGLNP DG + IP LT+E + + K V K ED K ++R R+ A D +K K +S+ D MK E + Sbjct: 2 ISDIIKELE-EKMTKSISALKKELTSMKAGRANPAMLDRIEVDYYGTMTPLNQLANISVPESRVLMIQPWDKSAMKSIEKAILISDLGLNPSNDGTTMRLVIPELTEETRKNIVKNVKKAGEDGKVALRAIRRDANDKVKSLKKDNSITEDEMKSAEND 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACSU (Ribosome-recycling factor OS=Bacillus subtilis GN=frr PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.982e-23 Identity = 57/133 (42.86%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 304 TVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 T +ME AI A REL +R GRA+P +LD + VE G + PLN L+ ++V +++ L I PYD + ++E AI+ + LGL P DG + AIPALT+E + + KVV K +E+ K ++R R+ A D +KK Sbjct: 9 TKEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVITPYDKTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAKVAVRNVRRDANDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOTN (Ribosome-recycling factor OS=Geobacillus thermodenitrificans (strain NG80-2) GN=frr PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.201e-23 Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +M+ A+ A SREL +R GRA+ G+L+ + V+ GV P+N LA +SV +++ L I PYD + +KE+E AI++S LG+ P DG + IP LT+E + + K+V K SE+ K ++R R+ A D +KK S + D ++ E Sbjct: 12 KMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQPYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAVRNIRRDANDELKKLEKNSEITEDELRSYTDE 159 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |