EY728468

Overview
NameEY728468
Unique NameEY728468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728468_ssr491 microsatellite EY728468_ssr491:491..502. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_TOBAC (Uridine 5'-monophosphate synthase (Fragment) OS=Nicotiana tabacum GN=PYR5-6 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 2.020e-85
Identity = 166/250 (66.40%), Postives = 207/250 (82.80%), Query Frame = 1
Query:   73 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKVAGSNLSGVRVRV*GLKYEKRAI**RMRLGKNV-QVMVKXENN-CVCW*CCPXAELVNLRE 816
            +ISAVKFG FKLKSGISSP+YIDLRLIVSYPS+LRQIS+T++ SLPS+TKYD+VCGVPYTALPIATC+S ++DVPMLMRRKE+KDYGTAKAIEG FK  + CLI+EDLVTSGASVLETA PLRAAGL VTDAVV+IDREQGGRENL ENGI LH+M+KL+EMV++L+EKG++ EETE++V KFLEE +KVA   +   +V +  L Y++RA   +   GK + ++MV+ E N C+       AEL+++ +
Sbjct:    1 DISAVKFGEFKLKSGISSPIYIDLRLIVSYPSILRQISQTLVGSLPSSTKYDVVCGVPYTALPIATCISTAHDVPMLMRRKEVKDYGTAKAIEGAFKPGQACLIVEDLVTSGASVLETAAPLRAAGLTVTDAVVMIDREQGGRENLAENGITLHSMVKLTEMVKILKEKGRVSEETEKMVKKFLEENRKVA-VPVKETKVSL-RLPYQERAKIAKNPTGKKLFEIMVQKETNLCLSADVATAAELLDIAD 248          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_ARATH (Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana GN=PYRE-F PE=2 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 6.497e-84
Identity = 167/260 (64.23%), Postives = 210/260 (80.77%), Query Frame = 1
Query:   43 SMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKVAGSNLSGVRVRV*GLKYEKRAI**RMRLGKNV-QVMVKXENN-CVCW*CCPXAELVNLRE 816
            +ME+LILQLHEI AVKFGNFKLKSGI SPVYIDLRLIVSYPSLL QIS+T+ISSLP +  +D+VCGVPYTALPIAT VSVSN +PMLMRRKEIKDYGT+KAIEG F+K++ CLIIEDLVTSGASVLETA PLRA GL V+DAVVLIDR+QGGRENL ENGI+LH+MI L++MVRVL+EKGK++ E E  ++KFLEE ++V+  ++   + +   L +++R+   +   GK +  +M+K E N C+       AEL+++ +
Sbjct:    3 AMEALILQLHEIGAVKFGNFKLKSGIFSPVYIDLRLIVSYPSLLTQISQTLISSLPPSATFDVVCGVPYTALPIATVVSVSNGIPMLMRRKEIKDYGTSKAIEGIFEKDQTCLIIEDLVTSGASVLETAAPLRAVGLKVSDAVVLIDRQQGGRENLAENGIKLHSMIMLTDMVRVLKEKGKIEVEVEVNLLKFLEENRRVSVPSVEKPKPKPRVLGFKERSELSKNPTGKKLFDIMLKKETNLCLAADVGTAAELLDIAD 262          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_PONAB (Uridine 5'-monophosphate synthase OS=Pongo abelii GN=UMPS PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.364e-54
Identity = 122/261 (46.74%), Postives = 171/261 (65.52%), Query Frame = 1
Query:   55 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKVA----GSNLSGVRVRV*GLKYEKRAI**RMR--LGKNVQVMVKXENNCVCW*CCPXAELVNLRE 816
            L+  L+++ A KFG+F LKSG+SSP+YIDLR IVS P LL Q++ T+  +  +    +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT + +EG     E CLIIED+VTSG+SVLETA  L+  GL VTDA+VL+DREQGG++ L+ +GI LH++  LS+M+ +L ++ K+D ET   V +F++E   VA    GS LS ++     L +  RA   R+     K +++M K E N      C  A++   RE
Sbjct:   11 LVTGLYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADTLFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPGETCLIIEDVVTSGSSVLETAEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLEILEQQKKIDAETVGRVKRFIQENVFVAANHNGSPLS-IKEAPKELSFSARAELPRIHPVASKLLRLMQKKETN-----LCLSADVSEARE 265          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_HUMAN (Uridine 5'-monophosphate synthase OS=Homo sapiens GN=UMPS PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.746e-53
Identity = 104/210 (49.52%), Postives = 150/210 (71.43%), Query Frame = 1
Query:   28 AMSSHSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKVAGSN 654
            A++  ++  L+  L+++ A KFG+F LKSG+SSP+YIDLR IVS P LL Q++  +  +  +    +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT + +EG     E CLIIED+VTSG+SVLET   L+  GL VTDA+VL+DREQGG++ L+ +GI LH++  LS+M+ +L ++ K+D ET   V +F++E   VA ++
Sbjct:    2 AVARAALGPLVTGLYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLEILEQQKKVDAETVGRVKRFIQENVFVAANH 211          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_MOUSE (Uridine 5'-monophosphate synthase OS=Mus musculus GN=Umps PE=2 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 1.726e-52
Identity = 101/201 (50.25%), Postives = 146/201 (72.64%), Query Frame = 1
Query:   31 MSSHSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 630
            ++S ++  L+ +L+++ A KFG+F LKSG+SSPVYIDLR IVS P LL Q++  +  +  +    +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT + +EG     + CL+IED+VTSGASVLET   L+  GL VTDA+VL+DREQGG++ L+  GI LHA+  LS+M+ +L+++ K+D +    V +F++E
Sbjct:    3 VASQALGPLVTELYDVQAFKFGSFVLKSGLSSPVYIDLRGIVSRPRLLSQVADILFQTAKNAGISFDSVCGVPYTALPLATVICSANHIPMLIRRKETKDYGTKRLVEGEINPGQTCLVIEDVVTSGASVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAQGIRLHAVCTLSQMLEILQQQEKIDADMVGRVKRFIQE 203          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_BOVIN (Uridine 5'-monophosphate synthase OS=Bos taurus GN=UMPS PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.254e-52
Identity = 105/201 (52.24%), Postives = 147/201 (73.13%), Query Frame = 1
Query:   52 SLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKVAGS 651
            SL+  L+++ A KFGNF LKSG+SSPVYIDLR I+S PS+L Q+++ +  +  +    +D VCGVPYTALP+AT V  ++++PML+RRKE KDYGT + IEG     + CLIIED+V+SG+SV ETA  L+  GL VTDAVVL+DREQGGR+NL+  GI LH++  LS ++ +L ++ K++ ET   V +F++E   VA +
Sbjct:   10 SLVTGLYDVQAFKFGNFVLKSGLSSPVYIDLRGIISRPSILNQVAEMLFQTAENAEINFDTVCGVPYTALPLATIVCSTHEIPMLIRRKEKKDYGTKRLIEGAVNPGDTCLIIEDVVSSGSSVWETAEVLQKEGLKVTDAVVLVDREQGGRDNLQARGIRLHSVCTLSTVLCILEQQKKINAETVERVKRFIQENAFVAAN 210          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_DROME (Uridine 5'-monophosphate synthase OS=Drosophila melanogaster GN=r-l PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 5.551e-51
Identity = 99/202 (49.01%), Postives = 144/202 (71.29%), Query Frame = 1
Query:   28 AMSSHSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPS---TTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFL 624
            A +S  M +L L+L EI+A KFG+FK+K GI+SPVY DLR+IVSYP +++ +S  ++  +     + K+  VCGVPYTALP+AT VSV    PML+RRKE K YGT K +EG F   + CLI+ED+VTSG+S+L+T   L+  G+VVTDAVV++DREQGG  N+ ++G+ +H++  LS ++  L E G++++ T   V K++
Sbjct:    3 AQNSDKMRALALKLFEINAFKFGDFKMKVGINSPVYFDLRVIVSYPDVMQTVSDLLVEHIKDKQLSAKH--VCGVPYTALPLATIVSVQQGTPMLVRRKEAKAYGTKKLVEGIFNAGDTCLIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGGVANIAKHGVRMHSLFTLSFLLNTLHEAGRIEKSTVEAVAKYI 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_DICDI (Uridine 5'-monophosphate synthase OS=Dictyostelium discoideum GN=pyr56 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 8.016e-50
Identity = 102/204 (50.00%), Postives = 142/204 (69.61%), Query Frame = 1
Query:   43 SMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYD----LVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKV 642
            +++ L+L+L+EI A+K G FKLKSGI SP+YIDLR+ VS P LL  I++ +   +  +        LVCGVPYTALPIAT +S++N++PM++RRKE K YGT + IEG FK+ +  L++EDLVTSGASVLET   L + GL VTD VVL+DR+QG R+ L++ G  LH++  + E++  L E GKL   T  +V  FL+  + V
Sbjct:    2 NIKELVLKLNEIDAIKLGEFKLKSGIISPIYIDLRVTVSSPPLLAAIAEMMYQKVYKSGNAQETPALVCGVPYTALPIATGMSIANNIPMVVRRKEAKAYGTKQLIEGRFKEGDNVLVVEDLVTSGASVLETVRDLNSVGLKVTDVVVLLDRQQGARQALEKQGYRLHSVFTMEELINTLIEAGKLTGRTLELVQSFLDANRNV 205          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRFE_ANASP (Bifunctional enzyme pyrF/pyrE OS=Anabaena sp. (strain PCC 7120) GN=pyrFE PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.958e-37
Identity = 77/189 (40.74%), Postives = 123/189 (65.08%), Query Frame = 1
Query:   31 MSSHSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEE 597
            +  H +  LILQL++I  + FGNF   SG   P YIDLR I+S P +  Q+     + + + T +D + G+PY +LP AT +++  + PM+  RKE+K +GT + IEGNF+  E+ ++++D++ SG SV+E A  L++AGL V D VV ID EQG ++ L+ NG   HA++ +SE+  VL + G++++E
Sbjct:  282 VKQHPLHDLILQLYDIDCIMFGNFVQASGAVFPYYIDLRKIISNPQVFNQVLSGYENIVKNLT-FDRLAGIPYGSLPTATGLALRLNCPMIFPRKEVKAHGTRRLIEGNFRTGEVVVVVDDILISGKSVMEGADKLKSAGLNVHDIVVFIDHEQGVKDKLQANGYRGHAVLTISEITSVLHQAGRINDE 469          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYR5_NAEGR (Uridine 5'-monophosphate synthase OS=Naegleria gruberi GN=UMP PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.734e-36
Identity = 85/203 (41.87%), Postives = 133/203 (65.52%), Query Frame = 1
Query:   49 ESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTI--ISSLPSTTKYD--LVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEI-CLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQ----GGRENLK--ENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFL 624
            + L+L L +I A+KFG F LKSGI SP Y+DLR+I   P +LRQ S  +  + ++   T  +  ++CGVPY+AL  ++C+S++ D+PM++ RKE K YGT   +EG + K E  C++IED++TSGAS++ETA  L   GL+VTDA+V + REQ     G   LK  E    +H  + ++E+ +VL ++GK+ +E    +++F+
Sbjct:   13 KELVLDLIQIGALKFGRFTLKSGIVSPFYVDLRIIG--PKMLRQFSVLLYHVMTVKGLTNMEKRVICGVPYSALTFSSCMSMTYDLPMVICRKERKQYGTGNMVEGIYTKNETNCILIEDVITSGASIVETAEKLENEGLLVTDALVFLTREQLPLTNGMHILKKGEKVYNVHPCLTMTEVTQVLLDEGKMSQEQREDILQFI 213          
The following BLAST results are available for this feature:
BLAST of EY728468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PYR5_TOBAC2.020e-8566.40Uridine 5'-monophosphate synthase (Fragment) OS=Ni... [more]
PYR5_ARATH6.497e-8464.23Uridine 5'-monophosphate synthase OS=Arabidopsis t... [more]
PYR5_PONAB5.364e-5446.74Uridine 5'-monophosphate synthase OS=Pongo abelii ... [more]
PYR5_HUMAN7.746e-5349.52Uridine 5'-monophosphate synthase OS=Homo sapiens ... [more]
PYR5_MOUSE1.726e-5250.25Uridine 5'-monophosphate synthase OS=Mus musculus ... [more]
PYR5_BOVIN2.254e-5252.24Uridine 5'-monophosphate synthase OS=Bos taurus GN... [more]
PYR5_DROME5.551e-5149.01Uridine 5'-monophosphate synthase OS=Drosophila me... [more]
PYR5_DICDI8.016e-5050.00Uridine 5'-monophosphate synthase OS=Dictyostelium... [more]
PYRFE_ANASP5.958e-3740.74Bifunctional enzyme pyrF/pyrE OS=Anabaena sp. (str... [more]
PYR5_NAEGR1.734e-3641.87Uridine 5'-monophosphate synthase OS=Naegleria gru... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728468 ID=EY728468; Name=EY728468; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCCCAAAAGGCAGAAACGCAATGTCGTCGCATTCGATGGA
GTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCGGAAACT
TTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTCCGACTT
ATCGTTTCGTACCCTTCCCTCCTCCGCCAAATATCCAAAACCATCATCTC
CTCCCTCCCCTCCACAACCAAATACGACCTCGTGTGCGGCGTTCCGTACA
CCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTCCCCATG
CTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCAAGGCCATCGA
AGGCAATTTCAAGAAGGAAGAAATCTGTCTGATCATCGAAGATTTAGTCA
CCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCGGCGGGG
CTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGGAGGGAG
GGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAAAGCTGA
GCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAGGAAACG
GAGAGAGTGGTGATGAAGTTTTTGGAGGAAAANAAGAAAGTGGCGGGTTC
GAATTTAAGTGGGGTTAGGGTTAGGGTTTAGGGTTTGAAGTACGAAAAAA
GGGCGATTTGATGAAGAATGAGACTGGGAAAAAATGTTCAAGTGATGGTG
AAAAANGAAAATAATTGTGTTTGCTGGTGATGTTGCCCTGNTGCTGAGTT
GGTCAATTTGCGAGAAGGTGGGCCAAGATCTGGTGTGGAAACCAGGTGAT
ATTTTGCTGATTCCCCGCGAATTGGTGCAANTTGTGGC
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