EY728442

Overview
NameEY728442
Unique NameEY728442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11744 contig Csv1_Contig11744:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY728442 vs. ExPASy Swiss-Prot
Match: EIN2_ARATH (Ethylene-insensitive protein 2 OS=Arabidopsis thaliana GN=EIN2 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.164e-68
Identity = 145/286 (50.70%), Postives = 180/286 (62.94%), Query Frame = 2 
Query:   11 AVSRNAQLQSERSYFDVSSSGPADSVSIPSSSAKKYHSLPDISGLSVPLREQFM-SNKGARVD---GSIAYKPSIGRPSYEPSLYSNPGSRAGTTLAFDELSPSKI-YRDTFPMQLSSGLDTGSLWSRQPFEQFGVVDK-----------SKSSAISQEATSIADAEAKLLQSFRVCVVKILQLEGSEWLFRHNDGADEDLIDRVAAREKYLYEAETREKNQVVHMGESHYLTYERKLGSTLKNDXASFTNFMVSSVPHCGDGCIWKVDLILSFGVWCIHRILILS 820
            A SR+   QSERSY+ V SSG  D+V    ++ KKY S+PDISGLS+  R   + +NK    D   G   Y  S GR S E SLYSN GSR G    +D++S S+  YRD + +  S+   TGSLWSRQPFEQFGV ++           S    I   A+S  DAEAKLLQSFR C++K+++LEGSEWLF  +DG DE+LIDRVAAREK++YEAE RE NQV HMGE                        ++SSVP+CGDGC+W+ DLI+SFGVWCIHR+L LS
Sbjct:  887 AGSRSISRQSERSYYGVPSSGNTDTVGAAVANEKKYSSMPDISGLSMSARNMHLPNNKSGYWDPSSGGGGYGASYGRLSNESSLYSNLGSRVGVPSTYDDISQSRGGYRDAYSLPQSATTGTGSLWSRQPFEQFGVAERNGAVGEELRNRSNPINIDNNASSNVDAEAKLLQSFRHCILKLIKLEGSEWLFGQSDGVDEELIDRVAAREKFIYEAEAREINQVGHMGEP-----------------------LISSVPNCGDGCVWRADLIVSFGVWCIHRVLDLS 1149
The following BLAST results are available for this feature:
BLAST of EY728442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EIN2_ARATH6.164e-6850.70Ethylene-insensitive protein 2 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-G04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728442 ID=EY728442; Name=EY728442; organism=Citrus sinensis; type=EST; length=860bp
CACGCGTCCGGCAGTATCTAGGAATGCTCAATTGCAATCTGAAAGATCAT
ATTTTGATGTTTCCTCTTCTGGACCTGCTGATTCTGTTTCTATACCATCA
TCCAGTGCAAAGAAATACCATAGCTTGCCTGACATATCGGGACTTTCTGT
TCCCCTAAGGGAACAATTTATGTCCAATAAGGGTGCTCGTGTGGATGGTT
CCATTGCATATAAGCCATCTATCGGGAGGCCAAGTTACGAACCATCCCTG
TATTCGAATCCTGGATCTAGGGCGGGAACAACTTTGGCGTTTGATGAGCT
CTCTCCATCAAAAATCTATAGAGATACTTTCCCCATGCAGTTAAGTTCAG
GCTTAGATACTGGATCGCTTTGGTCTAGACAGCCTTTTGAGCAGTTTGGT
GTAGTTGATAAAAGTAAGTCAAGTGCCATTTCTCAAGAAGCTACTTCAAT
TGCTGATGCAGAAGCAAAACTTCTCCAATCTTTTAGAGTTTGTGTTGTAA
AGATTTTGCAATTAGAAGGATCTGAGTGGTTGTTTAGACATAATGATGGA
GCTGATGAAGATTTAATTGATCGAGTGGCTGCTAGGGAGAAGTATCTTTA
TGAAGCTGAAACTAGAGAGAAAAACCAGGTGGTTCATATGGGTGAATCTC
ACTATTTGACTTATGAAAGGAAGCTTGGTTCCACACTGAAGAATGATGAN
GCAAGTTTTACCAACTTCATGGTCTCCTCGGTTCCTCACTGTGGAGATGG
CTGTATATGGAAAGTGGACTTGATATTAAGCTTCGGAGTATGGTGCATTC
ACCGGATTCTTATTCTTTCCTCATGGAGAGCCGGCCTAACTGTGGGGGAA
ATATCTTACT
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