EY728414

Overview
NameEY728414
Unique NameEY728414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: ACSL4_HUMAN (Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapiens GN=ACSL4 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 3.687e-41
Identity = 84/186 (45.16%), Postives = 109/186 (58.60%), Query Frame = 2
Query:   11 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWAHE 568
            APLS  + RF+N+C   PIGQ YGLTE+C   T +E  D + GRVG P+ CC IKL  W EGGY  +DKP PRGEIV+GG N++ GYF N  KT+E Y VD  G  WF TGDIG+  P   L+++  ++  V         LGKVEAAL +   ++ I   A     Y ++   P+ K L   A +
Sbjct:  444 APLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEIKLKDWQEGGYTINDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKRLTLLAQQ 629          

HSP 2 Score: 24.2534 bits (51), Expect = 3.687e-41
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  663 KTQQLEIPAKIKLIPNP*NP 722
            K ++ EIP K++L P P  P
Sbjct:  661 KLERFEIPIKVRLSPEPWTP 680          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: ACSL4_RAT (Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.807e-41
Identity = 84/186 (45.16%), Postives = 108/186 (58.06%), Query Frame = 2
Query:   11 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWAHE 568
            APLS  + RF+N+C   PIGQ YGLTE+C   T +E  D + GRVG P+ CC IKL  W EGGY   DKP PRGEIV+GG N++ GYF N  KT+E Y VD  G  WF TGDIG+  P   L+++  ++  V         LGKVEAAL +   ++ I   A     Y ++   P+ K L   A +
Sbjct:  403 APLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEIKLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLAQQ 588          

HSP 2 Score: 24.2534 bits (51), Expect = 4.807e-41
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  663 KTQQLEIPAKIKLIPNP*NP 722
            K ++ EIP K++L P P  P
Sbjct:  620 KLERFEIPIKVRLSPEPWTP 639          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: ACSL4_MOUSE (Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 8.156e-41
Identity = 84/189 (44.44%), Postives = 110/189 (58.20%), Query Frame = 2
Query:    2 HASAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWAHE 568
            +  APLS  + RF+N+C+  PIGQ YGLTE+C   T +E  D + GRVG P+ CC IKL  W EGGY   DKP PRGEIV+GG N++ GYF N  KT+E Y VD  G  WF TGDIG+  P   L+++  ++  V         LGKVEAAL +   ++ I   A     Y ++   P+ K L   A +
Sbjct:  441 YGGAPLSPQTHRFMNVCLCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAPLICCEIKLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYCVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVFLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLAQQ 629          

HSP 2 Score: 24.2534 bits (51), Expect = 8.156e-41
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  663 KTQQLEIPAKIKLIPNP*NP 722
            K ++ EIP K++L P P  P
Sbjct:  661 KLERFEIPIKVRLSPEPWTP 680          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: ACSL3_MOUSE (Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus GN=Acsl3 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.062e-40
Identity = 84/190 (44.21%), Postives = 110/190 (57.89%), Query Frame = 2
Query:   11 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWAHEATLK 580
            APLSA +QRF+NIC   P+GQ YGLTE+    T +E  D + GRVG P+ CC IKL +W+EGGY  +DKP PRGEI++GG NVT GY+ N  KT   +  D  G  W  TGDIG+  P   LK++  ++  V         LGKVEAAL +   ++ I  +AN    Y +    P+ K L + A     K
Sbjct:  453 APLSATTQRFMNICFCCPVGQGYGLTESTGAGTITEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQNVTMGYYKNEAKTKTDFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYHSYVIGFVVPNQKELTELARTKGFK 642          

HSP 2 Score: 24.6386 bits (52), Expect = 3.062e-40
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  657 SCKTQQLEIPAKIKLIPNP*NP 722
            S   ++ EIP KI+L P+P  P
Sbjct:  668 SASLEKFEIPLKIRLSPDPWTP 689          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: ACSL3_HUMAN (Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapiens GN=ACSL3 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.935e-40
Identity = 98/244 (40.16%), Postives = 131/244 (53.69%), Query Frame = 2
Query:   11 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWAHEATLK--FEDPSKLCYKP*GCHEVHKPLPRDAKLQNSTVGNSRKN*VDPKPVKPEGGWV 736
            APLSA +QRF+NIC   P+GQ YGLTE+    T SE  D + GRVG P+ CC IKL +W+EGGY  +DKP PRGEI++GG +VT GY+ N  KT   +  D  G  W  TGDIG+  P   LK++  ++  V         LGKVEAAL +   V+ I  +AN    Y +    P+ K L + A +  LK  +E+    C       +V       A L+   +    K  + P+P  PE G V
Sbjct:  453 APLSATTQRFMNICFCCPVGQGYGLTESAGAGTISEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQSVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFEPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYANSYHSYVIGFVVPNQKELTELARKKGLKGTWEELCNSCEMENEVLKVLSEAAISASLEKFEI--PVKIRLSPEPWTPETGLV 694          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: ACSL3_RAT (Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norvegicus GN=Acsl3 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.989e-40
Identity = 83/184 (45.11%), Postives = 109/184 (59.24%), Query Frame = 2
Query:   11 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWA 562
            APLSA +QRF+NIC   P+GQ YGLTE+    T +E  D + GRVG P+ CC IKL +W+EGGY  +DKP PRGEI++GG NVT GY+ N  KT   +  D  G  W  TGDIG+  P   LK++  ++  V         LGKVEAAL +   ++ I  +AN    Y +    P+ K L + A
Sbjct:  453 APLSATTQRFMNICFCCPVGQGYGLTESTGAGTITEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQNVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYHSYVIGFVVPNQKELTELA 636          

HSP 2 Score: 24.6386 bits (52), Expect = 3.989e-40
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  657 SCKTQQLEIPAKIKLIPNP*NP 722
            S   ++ EIP KI+L P+P  P
Sbjct:  668 SASLEKFEIPLKIRLSPDPWTP 689          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: ACSL3_PONAB (Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abelii GN=ACSL3 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.145e-39
Identity = 98/244 (40.16%), Postives = 130/244 (53.28%), Query Frame = 2
Query:   11 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWAHEATLK--FEDPSKLCYKP*GCHEVHKPLPRDAKLQNSTVGNSRKN*VDPKPVKPEGGWV 736
            APLSA +QRF+NIC   P+GQ YGLTE+    T SE  D + GRVG P+ CC IKL +W+EGGY  +DKP PRGEI++GG  VT GY+ N  KT   +  D  G  W  TGDIG+  P   LK++  ++  V         LGKVEAAL +   V+ I  +AN    Y +    P+ K L + A +  LK  +E+    C       +V       A L+   +    K  + P+P  PE G V
Sbjct:  453 APLSATTQRFMNICFCCPVGQGYGLTESAGAGTISEVWDYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQIVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFEPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYANSYHSYVIGFVVPNQKELTELARKKGLKGTWEELCNSCEMENEVLKVLSEAAISASLEKFEI--PVKIRLSPEPWTPETGLV 694          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.040e-24
Identity = 58/183 (31.69%), Postives = 94/183 (51.37%), Query Frame = 2
Query:    8 SAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEK 556
            SAPL      F+  C   P+   YGL+E   G++ +  +D +VG VGPP+  C +KL+   E  Y ++DKP PRGE+ + GFNV  GYF +P KT E  K D     WF+TGDIG+      L ++  ++     +         +E+  + S +   + ++ + L  + V +  P  + ++K
Sbjct:  393 SAPLDPKLAEFLRACFCCPVVSGYGLSENVGGASVAYPEDNNVGHVGPPLSACEMKLIDVPEMNYFSTDKPCPRGEVCIRGFNVFKGYFKDPEKTKEDLKEDG----WFHTGDIGRWNENGTLSIIDRKKNIFKLSQGEYVAAEYLESVFVRSPFASQVFVYGDSLNSFLVGVVVPDFEVVQK 571          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.979e-21
Identity = 60/187 (32.09%), Postives = 90/187 (48.13%), Query Frame = 2
Query:    8 SAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWAHE 568
            +AP+SA    F+   +G    + YG TE  AG + S   D + G VG P+PC +IKLV  +E  Y  +   M  GE+ V G NV  GY  +P KT+E    D     W +TGDIG+  P   LK++  ++              K+E   + S  V  + +H   L  + +A+  P  ++L  WA +
Sbjct:  435 AAPVSATVLTFLRAALGCQFYEGYGQTECTAGCSLSVPGDWTAGHVGAPMPCNFIKLVDVEEMNYMAA---MGEGEVCVKGPNVFKGYLKDPAKTAEALDKDG----WLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYVRSEPVAQVFVHGESLQAFLIAIVVPDAESLASWARK 614          
BLAST of EY728414 vs. ExPASy Swiss-Prot
Match: FCSB_DICDI (Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.652e-20
Identity = 58/185 (31.35%), Postives = 95/185 (51.35%), Query Frame = 2
Query:    8 SAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDXRGMCWFYTGDIGQVTPMDVLKLLIGRRIXVNFNMESISPLGKVEAALISSNYVEYIMIHANPLPHYCVALGGPSHKALEKWA 562
            SAPLS D++ F+ + M   + Q YG +E C G      DD SVG +GPP     IKLV   E GY  S+  +  GE+ + G ++++GY+ +  KT E +K       WF+TGDIG+      L ++  ++     +      + K+E  ++ S YVE + I+ +      +A+  P  ++  +WA
Sbjct:  410 SAPLSFDTEVFLRVVMCCCVLQGYGASEGCGGDACKRLDDESVGTIGPPFASNEIKLVDVPELGY-DSNGEVQTGEVCLRGPSISSGYYKDEEKTREEFKDG-----WFHTGDIGRWNRDGSLSIVDRKKNIFKLSQGEYVAVEKIETIVVKSEYVEQVCIYGDSQKSCVIAIIHPHPESCSEWA 588          
The following BLAST results are available for this feature:
BLAST of EY728414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
ACSL4_HUMAN3.687e-4145.16Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapien... [more]
ACSL4_RAT4.807e-4145.16Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norv... [more]
ACSL4_MOUSE8.156e-4144.44Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculu... [more]
ACSL3_MOUSE3.062e-4044.21Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculu... [more]
ACSL3_HUMAN3.935e-4040.16Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapien... [more]
ACSL3_RAT3.989e-4045.11Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norv... [more]
ACSL3_PONAB1.145e-3940.16Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abeli... [more]
FCSA_DICDI1.040e-2431.69Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]
ACSL1_CAVPO6.979e-2132.09Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
FCSB_DICDI2.652e-2031.35Fatty acyl-CoA synthetase B OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-D08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728414 ID=EY728414; Name=EY728414; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGCTCCTTTATCTGCGGATTCCCAGCGGTTTATTAACATTT
GCATGGGGGCTCCAATAGGTCAAGCCTATGGCTTGACAGAAACTTGTGCC
GGATCTACATTTTCTGAGTGGGACGACCCATCTGTGGGCCGTGTGGGCCC
CCCTGTTCCTTGTTGCTACATTAAGCTTGTTTCCTGGGATGAAGGAGGAT
ATAAGACTTCTGACAAACCAATGCCTCGGGGAGAGATTGTTGTAGGTGGA
TTCAATGTGACAGCTGGTTACTTTAACAATCCAGGAAAAACTAGTGAGGT
GTACAAGGTTGATGANAGGGGTATGTGCTGGTTTTATACTGGTGACATTG
GACAAGTTACCCCGATGGATGTCTTGAAATTATTGATAGGAAGAAGGATA
TTNGTCAACTTCAACATGGAGAGTATATCTCCCTTGGGAAAGGTTGAGGC
AGCACTCATTTCAAGCAACTATGTTGAATATATCATGATACATGCAAATC
CCCTTCCACACTACTGTGTTGCCCTTGGTGGTCCATCACATAAAGCCTTG
GAGAAATGGGCCCATGAAGCTACCCTCAAGTTCGAAGATCCTTCGAAGTT
GTGTTACAAACCCTAAGGCTGTCATGAGGTTCACAAGCCCCTTCCCAGGG
ACGCAAAGCTGCAAAACTCAACAGTTGGAAATTCCCGCAAAAATTAAGTT
GATCCCAAACCCGTGAAACCCGAGGGTGGATGGGTCCCGCTGCCTTGAGA
ATAAAGAGGAACACCCGGGGCGANGTTCAGGGTAACCCCCAATGTTGTGT
CGCTAATGAATGGGGCATTGCCGTTGT
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