EY728384

Overview
NameEY728384
Unique NameEY728384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728384 vs. ExPASy Swiss-Prot
Match: Y5713_ARATH (PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.258e-17
Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 1 
Query:    1 PRVAEACLDNSAPLTKMMNTCYDAAGKRWPNFIAVDFYQRSDGGGTPEAIDEANGRLTCGCVNIAYCKANATFGTC 228
            P   +AC ++SAPL +M+ TC  + G R PNF+AV+FY RSDGGG  E +D  NG + CGC  ++ C+  A +G+C
Sbjct:  293 PVEKDACKEHSAPLAEMVGTCLKSGGNRMPNFLAVNFYMRSDGGGVFEILDRMNGPVLCGCETLSACQPGAAYGSC 368
The following BLAST results are available for this feature:
BLAST of EY728384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5713_ARATH6.258e-1747.37PI-PLC X domain-containing protein At5g67130 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728384 ID=EY728384; Name=EY728384; organism=Citrus sinensis; type=EST; length=548bp
CCACGCGTCGCAGAAGCATGCTTGGACAATTCAGCCCCACTAACTAAGAT
GATGAACACTTGCTATGATGCCGCTGGTAAACGGTGGCCAAACTTCATTG
CTGTTGATTTTTATCAGAGGAGTGATGGCGGAGGAACACCAGAAGCCATT
GATGAGGCGAATGGTCGTCTTACTTGTGGATGTGTCAATATAGCTTATTG
CAAGGCAAATGCCACCTTTGGTACATGTGACGTTCCCCCAATAGCCCCAC
CTCCTCCTGCTGCTGCAGGAACGACAGAGGATTCCCCGCAAAATCCCTCG
CAAGATAATACCAACAGTGCTCATAGGAATGACAGACCTCTTTTATTATG
GTTCGTTGGGACAATTTTGCCCATAGCTCTGGTATTATGGTGAAATTCTT
GAGAATTGCTTGGTTCTCTTTAGTTTTGATTTATGAACCACACGTGTATA
TTGTTTTGGACTNAATCAACGGTTCATTTGTATCTTCTTTTATATCATTG
AGGCATGAGAGCCCTTTCACGGCCGTTAAAAAAAAAAAAAAAAAAAAA
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