EY728360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_DESPS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Desulfotalea psychrophila GN=clpX PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55 Identity = 114/205 (55.61%), Postives = 148/205 (72.20%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PF++ DAT LT+AGYVG+D E++L LL AAD+DVE AQRGI+YIDE+DKI K++S + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + IDT +ILFICGGAFVGL + + R SIGF A + A+ R+ S LLE+V DL+ +GLIPE+ GR P++ SL L+ED LV++LREP NAL + Sbjct: 140 PFSVADATTLTEAGYVGDDVENILVSLLQAADYDVEKAQRGIIYIDEIDKIARKSDSASLTRDVSGEGVQQALLKIIEGTVASV--PPKGGRKHPQQELVKIDTTNILFICGGAFVGLGRVVKRRAGKKSIGFSADLSADKRS--------ESELLEAVRPEDLLKFGLIPELVGRLPVIASLRELSEDDLVRILREPKNALTRQ 334
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_SINMW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.372e-55 Identity = 118/207 (57.00%), Postives = 151/207 (72.95%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA VRA + R G +L + DLV +GLIPE GR P+L +L L+ED L+Q+L EP NALV++ Sbjct: 141 PFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQ 336
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_RHIME (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium meliloti GN=clpX PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.372e-55 Identity = 118/207 (57.00%), Postives = 151/207 (72.95%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA VRA + R G +L + DLV +GLIPE GR P+L +L L+ED L+Q+L EP NALV++ Sbjct: 141 PFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQ 336
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_MARAV (ATP-dependent Clp protease ATP-binding subunit clpX OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=clpX PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.372e-55 Identity = 113/205 (55.12%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFTI DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K I ER + SSIGF A V++ D+ T ++ V + DLV +GLIPE GR P++ +L+ L+E+ LVQ+L EP NAL ++ Sbjct: 142 PFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASV--PPQGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ------DDSKSTGDIIREVETEDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQ 338
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_AGRT5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpX PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.372e-55 Identity = 116/205 (56.59%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA V+A D +L + DLV +GLIPE GR P+L +L L+ED L+Q+L EP NALV++ Sbjct: 141 PFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQ 336
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_RHIEC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=clpX PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.322e-55 Identity = 115/205 (56.10%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA V+A D +L + DLV +GLIPE GR P+L +L L+ED L+Q+L EP NAL+++ Sbjct: 141 PFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQ 336
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_RHIE6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CIAT 652) GN=clpX PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.322e-55 Identity = 115/205 (56.10%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA V+A D +L + DLV +GLIPE GR P+L +L L+ED L+Q+L EP NAL+++ Sbjct: 141 PFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQ 336
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_SYMTH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Symbiobacterium thermophilum GN=clpX PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.087e-54 Identity = 115/205 (56.10%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PF I DAT+LT+AGYVGED E++L KL+ AAD+D+E A+RGIVYIDEVDKI K+E+ + RDVSGEGVQQALLK+LEGT+ +V P G RKHP + I I+T +ILFICGGAF G++K I+ R S +GFGA +R+ LL+ + DL+ +GLIPE GR PI+V+L AL+ED LV++LREP NALV++ Sbjct: 137 PFAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTIASV--PPQGGRKHPHQEFIQINTTNILFICGGAFDGIDKIIANRVGRSGLGFGADIRSKQEQN-------VGELLKQIMPEDLLKFGLIPEFIGRLPIVVTLDALDEDALVRILREPKNALVKQ 332
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_RHISN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium sp. (strain NGR234) GN=clpX PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54 Identity = 116/207 (56.04%), Postives = 151/207 (72.95%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL AAD++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA VR+ + R G +L + DLV +GLIPE GR P+L +L L+ED L+Q+L EP NAL+++ Sbjct: 141 PFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQ 336
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_RHILW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=clpX PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.854e-54 Identity = 114/205 (55.61%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA V+A D +L + DLV +GLIPE GR P+L +L L+ED L+Q+L EP NAL+++ Sbjct: 141 PFTMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ-------DDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQ 336 The following BLAST results are available for this feature:
BLAST of EY728360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728360 ID=EY728360; Name=EY728360; organism=Citrus sinensis; type=EST; length=894bpback to top |