EY728336

Overview
NameEY728336
Unique NameEY728336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728336 vs. ExPASy Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.376e-22
Identity = 89/249 (35.74%), Postives = 112/249 (44.98%), Query Frame = 2 
Query:   89 STNHNYHQQ-SNPGLSRFNSAPTALLVNFTDSLESGGVNKSSFESERLISRFMXXXXXXXXXXXFQEFEVKSPVSYGNSQQSCS---------------GLPPHYPRQSSA-MDHNSYDLFLD-QSSQVKSVNSNLVRQSSSPAGLFAKLSAQNGYASTKEXXXXXXXXXXXXDLSPSTKR-LKXXXXXXXXXXXXLGMLSRVSEVESDGPTHGKVRNGNGDAPVYSTGFSYGSWNDSSHFTGNLPT*K 778
            S NH Y    +  GL RF SAP+++L  F D       +K  F+S+RL+SRF+             +FE KSPVS  N+  S +               GLPPHYPRQS   M+    D FL   +   K V SNL+RQSSSPAG+F  LS QNGY S +             + SPS    L+            LGMLS++ E+                AP   T F Y  WND S F  NL + K
Sbjct:    3 SNNHLYDPNPTGSGLLRFRSAPSSVLAAFVDD------DKIGFDSDRLLSRFVTSNGVNGDLGS-PKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNSVGLDQFLGINNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRN-----LMNYEEDEESPSNSNGLRRHCSLSSRPPSSLGMLSQIPEI----------------AP--ETNFPYSHWNDPSSFIDNLSSLK 221
The following BLAST results are available for this feature:
BLAST of EY728336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BH130_ARATH2.376e-2235.74Transcription factor bHLH130 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-D09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728336 ID=EY728336; Name=EY728336; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGAACAGTCCTTACTCAATAAGAAACAGACCGAAACAGAGC
AAAAACAGAGGAGACAGAGTGATTGTGGCATGGATTCAAGTACTAATCAT
AATTATCATCAGCAATCCAATCCTGGGTTGTCAAGATTTAACTCTGCTCC
AACCGCGCTTCTGGTAAATTTCACTGACAGTTTAGAATCTGGTGGTGTTA
ATAAGAGCAGTTTTGAATCAGAGAGATTAATCTCAAGATTCATGAACTCT
GGTGGTGATAATAGCAACAACTCAAGCTTTCAAGAATTTGAGGTTAAATC
TCCTGTCAGTTATGGGAATTCTCAGCAAAGTTGTTCTGGTTTGCCGCCTC
ATTATCCGAGGCAGAGCTCTGCTATGGATCATAACTCGTATGATTTGTTT
TTGGATCAAAGCTCACAAGTGAAATCTGTTAACTCCAATCTTGTTAGGCA
GAGTAGCTCCCCTGCTGGACTTTTCGCGAAGCTGTCTGCTCAAAATGGCT
ATGCGAGCACGAAAGAAGTGGGAAGCTATGGTGGGGTGAATGGCTCTAAT
GGAGACCTGAGTCCATCTACGAAAAGGCTGAAAAGTCAGATTAGCATCCC
TTCAAGGATACCTTCTTCTTTGGGCATGTTGTCACGGGTCTCTGAAGTCG
AGAGTGATGGCCCTACACATGGAAAAGTGAGAAATGGGAATGGTGATGCT
CCAGTTTATAGCACTGGATTCTCGTATGGTTCTTGGAATGATTCATCCCA
TTTCACGGGAAATTTACCGACATGAAAAGAAAACAGGGGATGGGGAGCTT
GGGAATTCANTCCAATGTTGTCCCCCATTTGAGTTTGCCTAGACTCCGCC
GAAATGCTGCTGTGGAAAAGTCCTGCA
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