EY754310

Overview
NameEY754310
Unique NameEY754310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY754310 vs. ExPASy Swiss-Prot
Match: TL225_ARATH (Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.005e-71
Identity = 139/167 (83.23%), Postives = 150/167 (89.82%), Query Frame = 3 
Query:  339 LADLNKYEAETRGEFGIGSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQALCKYANGTNPITGVSTRKA-XVGK*PXDAYGFPSSPL 836
            +A+LN++EA+TRGEFGIGSAAQ+GSADL K VH  ENFRRANFTSADMRESDFSGS FNGAYLEKAVAYKANF+GADLSDTLMDRMVLNEANLTNAVLVR+VLTRSDLGGA IEGADFSDAVIDL QKQALCKYA GTNP+TGV TRK+   G    +AYG PSSPL
Sbjct:   89 MAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRRNAYGSPSSPL 255
The following BLAST results are available for this feature:
BLAST of EY754310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TL225_ARATH1.005e-7183.23Thylakoid lumenal protein At1g12250, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-013-B06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754310 ID=EY754310; Name=EY754310; organism=Citrus sinensis; type=EST; length=908bp
AACCCTCAGTCCTTGGTCCGGNATTCCACGCCCGACCCACGCGTCCGCTG
CTTATCTTACTGTCATGGCGCTTTCTTCAATCTCCCCACTATCCATTAAA
TCTCTGAACTTCTGCTCTTCATCTTCAAAGGGTCCGTATCAGCTGCATGC
CCTGTCAAAGCCACTTTGGGTAGCCTGTCAAATAAGCTCCAAGACTGAGA
GTGAAGGCCAATTTCCTGGAAGATTGTTCCAACAATCAGTGTGCAGGCCC
ATATGCAAAACTAAAGAACTGGCGAGTTTTTGTGTCGACTGCATTAGCAG
CTGCGGTGGTTGCATCGTGCAGCTCTAACATCTCTGCTCTTGCTGATCTT
AATAAGTACGAGGCAGAAACTCGCGGGGAATTTGGCATAGGGTCAGCTGC
CCAATTCGGTTCTGCAGATCTCAGGAAAGCAGTACATGTGAAAGAAAATT
TCAGAAGAGCAAATTTCACATCAGCCGATATGAGAGAATCTGATTTCAGT
GGTTCAAAATTCAATGGTGCATATCTTGAGAAAGCTGTTGCATATAAGGC
CAATTTTACAGGTGCGGATTTAAGTGACACATTAATGGATCGCATGGTAC
TTAACGAAGCTAATCTCACGAATGCTGTACTTGTTAGAACAGTACTAACT
CGAAGTGATCTTGGAGGTGCCATTATTGAAGGTGCTGATTTTAGTGATGC
TGTTATAGATCTTGCACAGAAGCAGGCTCTTTGCAAGTATGCAAATGGAA
CAAATCCAATAACAGGAGTGAGCACCAGAAAAGCCNTAGTTGGGAAATAG
CCGAANGATGCGTATGGNTTCCCCTCATCTCCTCTGTAAGTGCTCACCTC
AAAAGTGCTTGATCTGAGGTTTCTGTGACTCGGCACTGGACTTTGGATGC
TAATAATT
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