EY754291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 3.202e-76 Identity = 152/264 (57.58%), Postives = 167/264 (63.26%), Query Frame = 3 Query: 75 MASWVLSECGLKPLPHIFPRPRTG-----INPSKARFLHSKKSLTDLKLPLVKC-SGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI-TGLWIVQQDF*DSKFFSLLAYP 845 MASWVLSECGL+PLP ++P+PRTG NP+K RF S TDL C S R++NW L+VSAPLRV +E E+ FDPGAPPPFKL+DIR AIPKHCWVKDPW+SM Y PLYW AQ TMFWALFVLGHDCGHGSFSND KLNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVENDES HPLSEKI L + + F LLAYP Sbjct: 1 MASWVLSECGLRPLPRVYPKPRTGHPLLNSNPTKLRF-----SRTDLGNGSSFCLSSGILREKNWALRVSAPLRVLQVEEEEENKEGERVINGGEE----------FDPGAPPPFKLSDIREAIPKHCWVKDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNDPKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYKNLDTATKKLRFTLPFPLLAYP 249
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.710e-75 Identity = 156/294 (53.06%), Postives = 177/294 (60.20%), Query Frame = 3 Query: 75 MASWVLSECGLKPLPHIFPRPRTGI---NPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI-TGLWIVQQDF*DSKFFSLLAYP-FIFXXXXXXXXXXXXPYMTCLSQ*E-KDVITS 938 MA+W +CGLKPL + PRPRTG + S+ FL + K + K ++C+ R+RNWGLKVSAPLRVA +E E FDPGAPPPF LADIRAAIPKHCWVKDPW+SMSY PLYWAAQGTMFWALFVLGHDCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQ+HGH ENDES HPL EK+ L V + + F LLA+P ++F P E KDVITS Sbjct: 1 MATWYHQKCGLKPLAPVIPRPRTGAALSSTSRVEFLDTNKVVAGPKFQPLRCN---LRERNWGLKVSAPLRVASIEEEQKSVDLTNGTNGVEHEKLPE-----FDPGAPPPFNLADIRAAIPKHCWVKDPWRSMSYVVRDVIAVFGLAAAAAYLNNWLVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNSKLNSVVGHLLHSSILVPYHGWRISHRTHHQHHGHAENDESWHPLPEKLFRSLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPSSDLFVPNERKDVITS 286
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.447e-74 Identity = 140/245 (57.14%), Postives = 152/245 (62.04%), Query Frame = 3 Query: 75 MASWVLSECGLKPLPHIFPRPRTGI--NPSKARFLHSKKSLTDLKLPLVKCSGDFSRD---RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI 779 MA+ VLSECG++PLP I+ PR+ N +K R S S PL G SRD RNW L VS PL +PLE ++ FDPGAPPPF LADIRAAIPKHCWVK+PWKS+SY PLYW AQGTMFWALFVLGHDCGHGSFSND KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDES HP+SEKI Sbjct: 1 MANLVLSECGIRPLPRIYTTPRSNFLSNNNKFRPSLSSSSYKTSSSPL--SFGLNSRDGFTRNWALNVSTPLTTPIFEESPLEEDNKQR---------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKI 222 HSP 2 Score: 42.3578 bits (98), Expect = 2.447e-74 Identity = 24/47 (51.06%), Postives = 27/47 (57.45%), Query Frame = 2 Query: 779 YRTLDSATRFLRFKI-LFPACISFYLWSXSPGKSGSTL-TLHDLFVP 913 Y TLD TRF RF + L FYLW+ SPGK GS DLF+P Sbjct: 223 YNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLP 269
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 4.050e-71 Identity = 146/263 (55.51%), Postives = 159/263 (60.46%), Query Frame = 3 Query: 78 ASWVLSECGLKPLPHIFPRPRTGI-----NPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI-TGLWIVQQDF*DSKFFSLLAYPF 848 A WVLSECGL+PLP I+ RPR G N K R L KS +L S S+ NW L V+ P+ V+ + GED FD GAPPPF LADIRAAIPKHCWVK+PW+SMSY PLYW QGTMFWALFVLGHDCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDES HPLSEKI L V + S F +LAYPF Sbjct: 3 AGWVLSECGLRPLPRIYSRPRIGFTSKTTNLLKLRELPDSKSY-NLCSSFKVSSWSNSKQSNWALNVAVPVNVSTVSGEDDREREEFNGIVNVDEGKGEF----FDAGAPPPFTLADIRAAIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFKSLDNVTKTLRFSLPFPMLAYPF 260
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 4.634e-67 Identity = 136/259 (52.51%), Postives = 148/259 (57.14%), Query Frame = 3 Query: 75 MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI-TGLWIVQQDF*DSKFFSLLAYPF 848 MAS VLSECG +PLP +P+ T + L L G +S+ RNW L V+ PL E+ FDPGAPPPF LADIRAAIPKHCWVK+PW SMSY PLYW AQGTMFWALFVLGHDCGHGSFSND +LNSV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDES HPL E I L Q F + F +LAYPF Sbjct: 1 MASSVLSECGFRPLPRFYPKHTTSFASNPKPTFKFNPPLKPPSSLLNSRYGFYSKTRNWALNVATPLTTLQSPSEEDTER--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPF 239
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.463e-60 Identity = 122/208 (58.65%), Postives = 130/208 (62.50%), Query Frame = 3 Query: 243 RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI-TGLWIVQQDF*DSKFFSLLAYPF 848 RNW L V+ PL V P+E E FDPGAPPPF LADIRAAIPKHCWVK+PWKSMSY PLYW AQGTMFWALFVLGHDCGHGSFSND +LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDES HP+SEKI L + F + +LAYPF Sbjct: 17 RNWALNVTTPLTVDSSSSPPIEEEPKTQR--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPLVMLAYPF 204
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 3.334e-55 Identity = 88/135 (65.19%), Postives = 100/135 (74.07%), Query Frame = 3 Query: 375 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI 779 FDP APPPFK+A+IRA+IPKHCWVK+PW+S+SY +Y QGTMFWALFVLGHDCGHGSFS+ LNS+VGH+LHSSILVPYHGWRISHRTHHQNHGH+E DES PL+EKI Sbjct: 25 FDPSAPPPFKIAEIRASIPKHCWVKNPWRSLSYVLRDVLVIAALVAAAIHFDNWLLWLIYCPIQGTMFWALFVLGHDCGHGSFSDSPLLNSLVGHILHSSILVPYHGWRISHRTHHQNHGHIEKDESWVPLTEKI 159 HSP 2 Score: 41.2022 bits (95), Expect = 3.334e-55 Identity = 22/55 (40.00%), Postives = 30/55 (54.55%), Query Frame = 2 Query: 761 PVV*ENYRTLDSATRFLRFKILFPACI-SFYLWSXSPGKSGSTLTLHDLFVPVRE 922 P+ + Y+ LDS TR +RF + FP + YL+S SPGK GS + P E Sbjct: 154 PLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSE 208
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 4.726e-54 Identity = 91/135 (67.41%), Postives = 98/135 (72.59%), Query Frame = 3 Query: 375 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI 779 FDP A PPFK+ DIRAAIPKHCWVK P +SMSY PLYW AQGT+FWA+FVLGHDCGHGSFS+ LNSVVGH+LHS ILVPYHGWRISHRTHHQNHGHVENDES PL EK+ Sbjct: 23 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVTRDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKL 157 HSP 2 Score: 34.6538 bits (78), Expect = 4.726e-54 Identity = 19/47 (40.43%), Postives = 24/47 (51.06%), Query Frame = 2 Query: 779 YRTLDSATRFLRFKILFPA-CISFYLWSXSPGKSGSTLTLH-DLFVP 913 Y+ L +TR LR+ + P YLW SPGK GS + LF P Sbjct: 158 YKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKEGSHFNPYSSLFAP 204
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.600e-51 Identity = 107/191 (56.02%), Postives = 120/191 (62.83%), Query Frame = 3 Query: 375 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI-TGLWIVQQDF*DSKFFSLLAYPF-IFXXXXXXXXXXXXPYMTCLSQ*E-KDVITS 938 FDPGAPPPFK+ADIRAAIPKHCW K +S+SY PLYW AQGTMFWALFVLGHDCGHGSFSN KLNS VGH+LHS ILVPY+GWRISHRTHHQNHGHVE DES PL+EK+ L + + S F + AYPF ++ PY S E K V+TS Sbjct: 22 FDPGAPPPFKIADIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISFNSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVGHILHSLILVPYNGWRISHRTHHQNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEGSHFNPYSNLFSPGERKGVVTS 212
BLAST of EY754291 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.310e-50 Identity = 91/135 (67.41%), Postives = 99/135 (73.33%), Query Frame = 3 Query: 375 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESXHPLSEKI 779 FDP A PPFK+ DIRAAIPKHCWVK P +SMSY PLYWAAQGT+FWA+FVLGHDCGHGSFS+ LNSVVGH+LHS ILVPYHGWRISHRTHHQNHGHVENDES PL E++ Sbjct: 26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPERV 160 The following BLAST results are available for this feature:
BLAST of EY754291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY754291 ID=EY754291; Name=EY754291; organism=Citrus sinensis; type=EST; length=948bpback to top |