EY754290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: C3H49_ORYSJ (Zinc finger CCCH domain-containing protein 49 OS=Oryza sativa subsp. japonica GN=Os07g0281000 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.779e-77 Identity = 152/243 (62.55%), Postives = 174/243 (71.60%), Query Frame = 3 Query: 3 YRL*MPVTGEFPQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLIS-----XXXXXXXXXXXXXXXXXXXYFNIPPPPQQDRAYYPSMDPQRMGALVPSQEGENKSGPEK-------HXTAQHYPYRPPMPXTHG 695 YR MP TGE QQNIKDRYYGVNDPVALKLL+KAGEMPSL PP+DESI+TLY+GG+D+R+TEQDLRD FYAHGEIE+I+M Q+A AFVTYTTREGAEKAAEEL+NKLVIKG+RLKLMWGKPQ +PE DE +Q +AH GMLPR++IS YFNIP PP +R YPSMDPQRMGALV SQEG+ K GP++ + Q YP PP P HG Sbjct: 179 YRHEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGKPQAPKPE---EDEAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQQQPASASYYFNIPAPPAAERTLYPSMDPQRMGALVESQEGDGKPGPQQAGQGQASSSSGQSYP-EPPPPYYHG 417
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: C3H40_ORYSJ (Zinc finger CCCH domain-containing protein 40 OS=Oryza sativa subsp. japonica GN=Os06g0170500 PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.601e-75 Identity = 147/223 (65.92%), Postives = 165/223 (73.99%), Query Frame = 3 Query: 3 YRL*MPVTGEFPQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLIS-----XXXXXXXXXXXXXXXXXXXYFNIPPPPQQDRAYYPSMDPQRMGALVPSQEGENKSGPEKHXTAQ 656 YR MP TGE QQNIKDRYYGVNDPVALKLL KAGEMPSL PP+DESI+TLY+GG++ RITEQDLRD FYAHGEIESI+M Q+A AFVTYTTREGAEKAAEEL+NKLVIKG+RLKLMWGKPQ +PE DE +Q +AH GMLPR++IS YFNIP PP +R YPSMDPQRMGALV SQEG+ K GP++ AQ Sbjct: 179 YRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMPSLTPPDDESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGIRLKLMWGKPQAPKPE---DDEAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQQQAPSGSYYFNIPAPPGAERTLYPSMDPQRMGALVKSQEGDGKPGPQQAAQAQ 398
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: C3H25_ARATH (Zinc finger CCCH domain-containing protein 25 OS=Arabidopsis thaliana GN=At2g29580 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.607e-67 Identity = 137/240 (57.08%), Postives = 166/240 (69.17%), Query Frame = 3 Query: 3 YRL*MPVTGEFPQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISXXXXXXXXXXXXXXXXXXXYFNIPPPPQ---QDRAYYPSMDPQRMGALVPSQE-----GENKSGPEKHXT-------AQHYPYRPP 677 YR MP TGE QQNIKDRYYGVNDPVALKLL KAGEM +LE PED+SI+TLYVGG+++R+ EQD+RD FYAHGEIESI++ +KA AFVTYTTREGAEKAAEELSN+LV+ G RLKL WG+PQ +P+ + S+ QQ ++AHSG+LPR++IS Y+ PPPPQ QDR +YPSMDPQRMGA+ S+E +N+ T QH PY PP Sbjct: 179 YRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLTWGRPQVPKPDQDGSN---QQGSVAHSGLLPRAVIS--------QQQNQPPPMLQYYMHPPPPQPPHQDRPFYPSMDPQRMGAVSSSKESGSSTSDNRGASSSSYTMPPHGHYPQHQPYPPP 407
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: C3H4_ARATH (Zinc finger CCCH domain-containing protein 4 OS=Arabidopsis thaliana GN=At1g07360 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 9.272e-65 Identity = 130/231 (56.28%), Postives = 156/231 (67.53%), Query Frame = 3 Query: 3 YRL*MPVTGEFPQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISXXXXXXXXXXXXXXXXXXXYFNIPPPPQQDRAYYPSMDPQRMGALVPSQEG------ENKSGPEKHXTAQHYPYRPP 677 YR MP TGE QQNIKDRYYGVNDPVA+KLL KAGEM +LE P+DESIKTLYVGG+++RI EQD+RD FYAHGEIESI++ KA AFVTYT+REGAEKAA+ELSN+LVI G RLKL WG+P+ + D QQ +AHSG+LPR++IS Y+ PPP QD+ YYPSMDPQRMGA++ +QE N + + H Y PP Sbjct: 179 YRHEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVINGQRLKLTWGRPKPDQ------DGANQQGGVAHSGLLPRAVIS--------QQHNQPPPMQQYYMHPPPANQDKPYYPSMDPQRMGAVISTQEAGGSSTENNGASSSSYMMPPHQSYPPP 395
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: C3H53_ARATH (Zinc finger CCCH domain-containing protein 53 OS=Arabidopsis thaliana GN=At5g07060 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.909e-34 Identity = 92/227 (40.53%), Postives = 120/227 (52.86%), Query Frame = 3 Query: 3 YRL*MPVTGEFPQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIAHSGMLPRSLISXXXXXXXXXXXXXXXXXXXYFNIPPPPQQDRAYYPSMDPQRMGALVPSQEGENKSGPEKHXTAQHYPYRPPMP 683 +R MP TGE QNI+DRYY VNDPVA+KLL KAGEM +LEPPEDESIKTLYVGG+++RI EQD+ D+FYA+GE+ESI++ AE+ GK +S +QQ +IAH+G++ + Y+ PPPP + ++YPSMD QRMGA +QE + S E + Y Y PMP Sbjct: 176 FRHEMPETGELSHQNIRDRYYSVNDPVAMKLLRKAGEMGTLEPPEDESIKTLYVGGLNSRIFEQDIHDHFYAYGEMESIRV-------------------MAED----------------GK------YDQSGSNQQQQGSIAHTGLISQQ-------------QNQHSQMQQYYMQPPPP-NEYSHYPSMDTQRMGAAFSTQESDGSSTSENNRAYSSYSY--PMP 345
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: RBM22_XENTR (Pre-mRNA-splicing factor RBM22 OS=Xenopus tropicalis GN=rbm22 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.358e-33 Identity = 85/229 (37.12%), Postives = 114/229 (49.78%), Query Frame = 3 Query: 3 YRL*MPVTGEFP--QQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQR-----PEGESSDEVRQQAAIAHSGMLPRSLISXXXXXXXXXXXXXXXXXXXYFNIPPPP------------------------QQDRAYYPSMDPQRMGA 596 YR P + P QNIKDRYYG+NDPVA KLL +A MP L+PPED+SI TLYVGG+ I+E +LR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NKL++ G RL + WG+ Q R +G S ++ + G LP ++PPPP +YPS DPQRMGA Sbjct: 181 YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQAARGKERERDGSSDPGMKLEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALVNISLPPPPGLSGPPPGYGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGA 409
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: RBM22_PONAB (Pre-mRNA-splicing factor RBM22 OS=Pongo abelii GN=RBM22 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.556e-32 Identity = 89/232 (38.36%), Postives = 119/232 (51.29%), Query Frame = 3 Query: 3 YRL*MPVTGEFP--QQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSD----------------------EVRQQAAIAHSGMLPRS------LISXXXXXXXXXXXXXXXXXXXYFNIPPPPQQDRA----YYPSMDPQRMGA 596 YR P + P QNIKDRYYG+NDPVA KLL +A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D ++ A A+ LP S I+ + + PPP RA +YPS DPQRMGA Sbjct: 181 YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGA 412
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: RBM22_MOUSE (Pre-mRNA-splicing factor RBM22 OS=Mus musculus GN=Rbm22 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.556e-32 Identity = 89/232 (38.36%), Postives = 119/232 (51.29%), Query Frame = 3 Query: 3 YRL*MPVTGEFP--QQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSD----------------------EVRQQAAIAHSGMLPRS------LISXXXXXXXXXXXXXXXXXXXYFNIPPPPQQDRA----YYPSMDPQRMGA 596 YR P + P QNIKDRYYG+NDPVA KLL +A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D ++ A A+ LP S I+ + + PPP RA +YPS DPQRMGA Sbjct: 181 YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGA 412
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: RBM22_MACFA (Pre-mRNA-splicing factor RBM22 OS=Macaca fascicularis GN=RBM22 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.556e-32 Identity = 89/232 (38.36%), Postives = 119/232 (51.29%), Query Frame = 3 Query: 3 YRL*MPVTGEFP--QQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSD----------------------EVRQQAAIAHSGMLPRS------LISXXXXXXXXXXXXXXXXXXXYFNIPPPPQQDRA----YYPSMDPQRMGA 596 YR P + P QNIKDRYYG+NDPVA KLL +A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D ++ A A+ LP S I+ + + PPP RA +YPS DPQRMGA Sbjct: 181 YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGA 412
BLAST of EY754290 vs. ExPASy Swiss-Prot
Match: RBM22_HUMAN (Pre-mRNA-splicing factor RBM22 OS=Homo sapiens GN=RBM22 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.556e-32 Identity = 89/232 (38.36%), Postives = 119/232 (51.29%), Query Frame = 3 Query: 3 YRL*MPVTGEFP--QQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSD----------------------EVRQQAAIAHSGMLPRS------LISXXXXXXXXXXXXXXXXXXXYFNIPPPPQQDRA----YYPSMDPQRMGA 596 YR P + P QNIKDRYYG+NDPVA KLL +A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D ++ A A+ LP S I+ + + PPP RA +YPS DPQRMGA Sbjct: 181 YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGA 412 The following BLAST results are available for this feature:
BLAST of EY754290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY754290 ID=EY754290; Name=EY754290; organism=Citrus sinensis; type=EST; length=923bpback to top |