EY754282

Overview
NameEY754282
Unique NameEY754282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY754282 vs. ExPASy Swiss-Prot
Match: Y4634_ARATH (Uncharacterized zinc finger protein At4g06634 OS=Arabidopsis thaliana GN=At4g06634 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.263e-35
Identity = 85/175 (48.57%), Postives = 102/175 (58.29%), Query Frame = 2 
Query:    5 EVPRYATPPEQITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM-----SXXXXXXXXXXXXXXMDEGSDQDAYAGKRVNGKSQ---KKSRAKPNLKMPPAKVTQRKSSTPSPATLNVVRKQQWTPK-----XXXXXXXXXXXXXXDRDNVEDGFRYG 490
            E P+Y  P E++ +T K PA V G  SS+RPYACPYEGCEKAYIHEYKLKLHLKREHPGH+                    +D+GSDQD Y     NGK Q   ++SRAKPN++ PPAKV  +K ST SPA   + +K  W  K                   DRDNVEDG+R+G
Sbjct:  200 ETPKYTPPAEKVLRTVKTPATVCGP-SSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADTPTLNKHNGNDRNEIDDGSDQDVYRKHASNGKGQTHKQQSRAKPNMRTPPAKV-GKKGSTSSPAKARIAKK-PWQAKETFEEVEREEEEDSEETEEDRDNVEDGWRFG 371
The following BLAST results are available for this feature:
BLAST of EY754282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4634_ARATH2.263e-3548.57Uncharacterized zinc finger protein At4g06634 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-012-H01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754282 ID=EY754282; Name=EY754282; organism=Citrus sinensis; type=EST; length=710bp
AATGGAGGTGCCCAGATACGCTACTCCTCCCGAGCAGATAACAAAAACTC
CCAAGCCACCTGCTGGGGTTTATGGTTCTGCATCATCTGAACGTCCTTAT
GCATGTCCTTATGAAGGGTGTGAAAAGGCATATATCCATGAATACAAGCT
TAAACTCCATCTGAAGCGGGAGCATCCCGGCCATATGTCTGATGAAAATG
CCGAGAATGCCACAACAAATGCTGATAATGAGATGGATGAAGGCAGTGAC
CAAGATGCCTATGCTGGAAAACGTGTTAATGGCAAAAGTCAAAAAAAAAG
CCGGGCGAAGCCAAACTTGAAGATGCCTCCTGCAAAAGTAACGCAACGCA
AAAGCTCAACTCCATCTCCTGCCACCTTGAATGTAGTGAGAAAGCAACAA
TGGACTCCTAAAGAAGAAGTTTACGAGGAAGAAGATAGTGAAGAAACTGA
GGAAGATCGTGACAATGTTGAGGATGGATTTAGGTACGGGGAAAATAATG
AAGATGATGATGAGGAGACTGAGTACGAAGACTGAAGCATATAAAAATGT
TTCCTTCACCCTTCTGGTAAGGGCACCTTGTATGTATCTAACCCTTACAA
ACAGGTTCTCTGNCATCTTTTATCTGCTTGCTTTCAGCATCTTTTTTTCT
CTCATTGCAGCATATAAATAAATTTAAAAATTTTTAATTTAAAAAAAAAA
AAAAAAAAGG
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