EY754273

Overview
NameEY754273
Unique NameEY754273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY754273 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.626e-40
Identity = 95/168 (56.55%), Postives = 116/168 (69.05%), Query Frame = 3 
Query:   15 SMAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAIENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 509
            S+AA++  AV+ PRVP+ +T       C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:    4 SVAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY754273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH4.626e-4056.55Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-012-G03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754273 ID=EY754273; Name=EY754273; organism=Citrus sinensis; type=EST; length=780bp
CACAAATCTAAAGTTCAATGGCAGCGACGGCGTACGCGGCGGTGTTAACT
CCACGTGTCCCCTCAACCACCACCGTCAAAGTCAAATCTTCTCACTGCTT
TGCTCTTCCCTGCCTCCCTCCTCGTTCGTCAACGCCACCATTCTCTTCTT
CCATTAAACAAGTTTCAGAGTCGAGAAGGTTTCCTTTGCTTCAGGTTAGA
GCCTCTTCCTCAGAAGAGACATCCACAGTTGATGCAGATGAACTTTTTTC
AGACTTGAAGGAAAAGTGGGATGCCATTGAAAACAAGTCCACGGTACTTC
TCTATGGAGGTGGGGCAATAGTGGCTGTTTGGTTATCCTCAACTATTGTT
GGTGCCATCAATTCAGTGCCTTTGCTTCCCAAACTCTTGGAGTTGATTGG
ACTTGGTTATACTGGATGGTTTGTCTACAGATACCTTCTCTTCAAGTCAA
GCAGAAAAGAACTAGCCACGGATATTGAAGCACTGAAGAAGAAGATTGCT
GGAACTGAATAGATTGTACATTCTGGAGGCAATTCATGTTTGTCCCTGAT
AGTCATTTATTTTGGTCCTCTATCATTGCATATGAGGCACTTGTATCCTG
TAGAGTAGGCTGCGTACGGATTCGTTTTATCCCTGTATTTTCCAGTATAT
CCCTGGAATAAGAGATTTGACAAAGTTATGTGTATGTCCCAGCATGATTG
CTTCTGTGGTTTANATCCANAAGCAGATTCACTTTTTCCAGCAAATACAT
GCTTCATAAAATCTGTATCAAAAAAAAAAA
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