EY754234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY754234 vs. ExPASy Swiss-Prot
Match: FAD6C_BRANA (Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 7.770e-98 Identity = 151/190 (79.47%), Postives = 173/190 (91.05%), Query Frame = 3 Query: 21 VRWHLDLSKFRPNPIKRVKISLACVFAFMAIGWPLIMLKTGIAGWIKYWLMPWLGFFFWMSTFTMVHHTAPHIPFKSPNEWNAAQAQLNGTVHCDYPKWIEILCHNINVHIPHHISPRIPSYNLKAAHKSIQQNWGKYLNEASWNWRLMKTIMTVCHIYDKEQNYVAFDQLAPKDSQPITFLKSVMPDHA 590 V WH +L KFRP+ + RVKISLACVFAFMA+GWPLI+ K G+ GW+K+WLMPWLG+ FWMSTFTMVHHTAPHIPFK +EWNAAQAQLNGTVHCDYP WIEILCH+INVHIPHHISPRIPSYNL+AAH+SIQ+NWGKY N A+WNWRLMKTIMTVCH+YDKE+NY+ FD+LAP++SQPITFLK MPD+A Sbjct: 253 VNWHFNLRKFRPSEVNRVKISLACVFAFMAVGWPLIIYKVGVLGWVKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISPRIPSYNLRAAHQSIQENWGKYTNLATWNWRLMKTIMTVCHVYDKEENYIPFDRLAPEESQPITFLKKAMPDYA 442
BLAST of EY754234 vs. ExPASy Swiss-Prot
Match: FAD6C_ARATH (Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD6 PE=1 SV=2) HSP 1 Score: 350.517 bits (898), Expect = 4.264e-96 Identity = 149/189 (78.84%), Postives = 171/189 (90.48%), Query Frame = 3 Query: 21 VRWHLDLSKFRPNPIKRVKISLACVFAFMAIGWPLIMLKTGIAGWIKYWLMPWLGFFFWMSTFTMVHHTAPHIPFKSPNEWNAAQAQLNGTVHCDYPKWIEILCHNINVHIPHHISPRIPSYNLKAAHKSIQQNWGKYLNEASWNWRLMKTIMTVCHIYDKEQNYVAFDQLAPKDSQPITFLKSVMPDH 587 V WH +L KFR + + RVKISLACVFAFMA+GWPLI+ K GI GW+K+WLMPWLG+ FWMSTFTMVHHTAPHIPFK +EWNAAQAQLNGTVHCDYP WIEILCH+INVHIPHHISPRIPSYNL+AAH+SIQ+NWGKY N A+WNWRLMKTIMTVCH+YDKE+NY+ FD+LAP++SQPITFLK MP++ Sbjct: 258 VNWHFNLKKFRASEVNRVKISLACVFAFMAVGWPLIVYKVGILGWVKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISPRIPSYNLRAAHESIQENWGKYTNLATWNWRLMKTIMTVCHVYDKEENYIPFDRLAPEESQPITFLKKAMPNY 446
BLAST of EY754234 vs. ExPASy Swiss-Prot
Match: FAD6C_SOYBN (Omega-6 fatty acid desaturase, chloroplastic OS=Glycine max PE=2 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 8.911e-86 Identity = 136/171 (79.53%), Postives = 152/171 (88.89%), Query Frame = 3 Query: 27 WHLDLSKFRPNPIKRVKISLACVFAFMAIGWPLIMLKTGIAGWIKYWLMPWLGFFFWMSTFTMVHHTAPHIPFKSPNEWNAAQAQLNGTVHCDYPKWIEILCHNINVHIPHHISPRIPSYNLKAAHKSIQQNWGKYLNEASWNWRLMKTIMTVCHIYDKEQNYVAFDQLAP 539 WH DL KFRP+ + RVKISLACVFAF+AIGWPLI+ KTGI GWIK+WLMPWLG+ FWMSTFTMVHHTAP+IPFK EWN AQAQLNGTVHCDYPKWIEILCH+INVHIPHHISPRIPSYNL+AAHKS+Q+NWG+YLNEASWNWRLMKTIMTVC +YDKE++ + P Sbjct: 254 WHFDLKKFRPSEVPRVKISLACVFAFIAIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMSTFTMVHHTAPYIPFKYSEEWNRAQAQLNGTVHCDYPKWIEILCHDINVHIPHHISPRIPSYNLRAAHKSLQENWGQYLNEASWNWRLMKTIMTVCQVYDKEKSLCCLRRTCP 424
BLAST of EY754234 vs. ExPASy Swiss-Prot
Match: FAD6C_SPIOL (Omega-6 fatty acid desaturase, chloroplastic OS=Spinacia oleracea GN=FAD6 PE=1 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.287e-84 Identity = 134/187 (71.66%), Postives = 162/187 (86.63%), Query Frame = 3 Query: 30 HLDLSKFRPNPIKRVKISLACVFAFMAIGWPLIMLKTGIAGWIKYWLMPWLGFFFWMSTFTMVHHTAPHIPFKSPNEWNAAQAQLNGTVHCDYPKWIEILCHNINVHIPHHISPRIPSYNLKAAHKSIQQNWGKYLNEASWNWRLMKTIMTVCHIYDKEQNYVAFDQLAPKDSQPITFLKSVMPDHA 590 H +L FR + +KR ISLA VFAFM IGWPLI+ KTGI GWIK+WLMPWLG+ FWMSTFT+VHHTAPHIPFKS EWNAAQAQL+GTVHCDYP+WIEILCH+I+VHIPHHISP+IPSYNL+AA++S+ +NWG+YLN+ NWRLM+TIMT CHIYDK+ NYV+F++ P++SQPI+ K VMPD+A Sbjct: 261 HFNLKDFRQSEVKRATISLAAVFAFMVIGWPLIIYKTGIVGWIKFWLMPWLGYHFWMSTFTIVHHTAPHIPFKSSKEWNAAQAQLSGTVHCDYPRWIEILCHDISVHIPHHISPKIPSYNLRAANQSLNENWGEYLNKPKSNWRLMRTIMTTCHIYDKDGNYVSFEKAVPEESQPISIPKRVMPDYA 447
BLAST of EY754234 vs. ExPASy Swiss-Prot
Match: DESA_SYNY3 (Fatty acid desaturase OS=Synechocystis sp. (strain PCC 6803) GN=desA PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.069e-58 Identity = 94/168 (55.95%), Postives = 126/168 (75.00%), Query Frame = 3 Query: 30 HLDLSKFRPNPIKRVKISLACVFAFMAIGWPLIMLKTGIAGWIKYWLMPWLGFFFWMSTFTMVHHTAPHIPFKSPNEWNAAQAQLNGTVHCDYPKWIEILCHNINVHIPHHISPRIPSYNLKAAHKSIQQNWGKYLNEASWNWRLMKTIMTVCHIYDKEQNYVAFDQL 533 H LS F +VK+S+A VF F AI +P +++ TG+ G++K+WLMPWL + FWMSTFT+VHHT P I F+ +W+AA+AQLNGTVHCDYP+W+E+LCH+INVHIPHH+S IPSYNL+ AH S+++NWG +L E ++NW+LM+ I CH+YD E Y F L Sbjct: 181 HFKLSNFAQRDRNKVKLSIAVVFLFAAIAFPALIITTGVWGFVKFWLMPWLVYHFWMSTFTIVHHTIPEIRFRPAADWSAAEAQLNGTVHCDYPRWVEVLCHDINVHIPHHLSVAIPSYNLRLAHGSLKENWGPFLYERTFNWQLMQQISGQCHLYDPEHGYRTFGSL 348
BLAST of EY754234 vs. ExPASy Swiss-Prot
Match: DESA_SPIPL (Fatty acid desaturase OS=Spirulina platensis GN=desA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.151e-39 Identity = 70/151 (46.36%), Postives = 103/151 (68.21%), Query Frame = 3 Query: 30 HLDLSKFRPNPIKRVKISLACVFAFMAIGWPLIMLKTGIAGWIKYWLMPWLGFFFWMSTFTMVHHTAPHIPFKSPNEWNAAQAQLNGTVHCDYPKWIEILCHNINVHIPHHISPRIPSYNLKAAHKSIQQNWGKYL-NEASWNWRLMKTIM 479 H D +KF ++VK S V AI +P ++L G+ G++K+W++PWL F FWMSTFT++HHT IPF+ P +W+ A++QL+GTVHC+Y +W E LCH+INVHIPHH++ IP YNL+ ++ G+YL E ++W LMK ++ Sbjct: 180 HFDWTKFEGKQRQQVKFSSLLVIGAAAIAFPTMILTIGVWGFVKFWVIPWLVFHFWMSTFTLLHHTIADIPFREPEQWHEAESQLSGTVHCNYSRWGEFLCHDINVHIPHHVTTAIPWYNLRTPTPVYRKIGGEYLYPECDFSWGLMKQVV 330
BLAST of EY754234 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11 Identity = 45/141 (31.91%), Postives = 69/141 (48.94%), Query Frame = 3 Query: 27 WHLDLSKFRPNPIKRVKISLACVFAFMAIGWPLIMLKTGIAGWIKYWLMPWLGFFFWMSTFTMVHHTAPH--IPFKSPNEWNAAQAQLNGTVHCDYPKWIEILCHNINVHIPHHISPRIPSYNLKAAHKSIQQNWGKYLNE 443 +H D F PN K V S C A +A+ L + G +K + +P+LG W+ T +HH +P+ EW+ + L T+ DY WI + H+I H+ HH+ P+IP Y+L A ++ + GKY E Sbjct: 264 FHPDSDLFVPNEKKDVITSTVCWTAMLALLVGLSFV-IGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDRDYG-WINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYRE 401 The following BLAST results are available for this feature:
BLAST of EY754234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY754234 ID=EY754234; Name=EY754234; organism=Citrus sinensis; type=EST; length=646bpback to top |