EY754128

Overview
NameEY754128
Unique NameEY754128
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig122 contig Csv1_Contig122:285..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_THEEB (Peptide methionine sulfoxide reductase msrB OS=Thermosynechococcus elongatus (strain BP-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.229e-38
Identity = 73/106 (68.87%), Postives = 85/106 (80.19%), Query Frame = 3
Query:   42 KGTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIG-SNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            KGTERAFTG YWN K PG Y C+CC TPLF S TK+DSGTGWPS++QP+  +N++ + DLS   M R EVLCAVCDAHLGHVF+DGPPPTG RYCINSA+L   P+
Sbjct:   26 KGTERAFTGCYWNNKKPGLYSCVCCGTPLFRSETKYDSGTGWPSFWQPLDPNNIRMERDLS-HGMVRTEVLCAVCDAHLGHVFEDGPPPTGLRYCINSAALAFVPE 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_AZOVD (Peptide methionine sulfoxide reductase msrB OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=msrB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.359e-37
Identity = 68/104 (65.38%), Postives = 80/104 (76.92%), Query Frame = 3
Query:   45 GTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            GTERAF+GEY+ T  PG YHC CCD PLF+S  K+D+G GWPSY+QP+ ++  +  D     M R EVLCA CDAHLGHVF DGPPPTG RYCINSASL+LKP+
Sbjct:   27 GTERAFSGEYYATSVPGVYHCACCDAPLFDSDAKYDAGCGWPSYFQPVAASALTSRDDYSHGMHRIEVLCARCDAHLGHVFPDGPPPTGLRYCINSASLRLKPR 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_ACAM1 (Peptide methionine sulfoxide reductase msrB OS=Acaryochloris marina (strain MBIC 11017) GN=msrB PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 3
Query:   45 GTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIG-SNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            GTERAFTGEY + K  GTY C+CC T LF S TKFDSGTGWPS++ P   ++++ K D S+ FM R EVLCAVCDAHLGHVF+DGP PTG RYC+NSA+LK  PK
Sbjct:   27 GTERAFTGEYHDLKAAGTYQCVCCGTELFTSDTKFDSGTGWPSFWAPADKTHVEEKTDRSL-FMVRTEVLCAVCDAHLGHVFNDGPKPTGLRYCMNSAALKFVPK 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_PSEAE (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa GN=msrB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 68/104 (65.38%), Postives = 77/104 (74.04%), Query Frame = 3
Query:   45 GTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            GTERAF+GEY  TKTPG YHC CC T LF+S  K+DSG+GWPSY+QP+ +    +LD     M R EV C  CDAHLGHVF DGP PTG RYCINSASLKL P+
Sbjct:   27 GTERAFSGEYHATKTPGIYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDGPRPTGLRYCINSASLKLVPR 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_PSEAB (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=msrB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 68/104 (65.38%), Postives = 77/104 (74.04%), Query Frame = 3
Query:   45 GTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            GTERAF+GEY  TKTPG YHC CC T LF+S  K+DSG+GWPSY+QP+ +    +LD     M R EV C  CDAHLGHVF DGP PTG RYCINSASLKL P+
Sbjct:   27 GTERAFSGEYHATKTPGIYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDGPRPTGLRYCINSASLKLVPR 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_PSEA8 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain LESB58) GN=msrB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 68/104 (65.38%), Postives = 77/104 (74.04%), Query Frame = 3
Query:   45 GTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            GTERAF+GEY  TKTPG YHC CC T LF+S  K+DSG+GWPSY+QP+ +    +LD     M R EV C  CDAHLGHVF DGP PTG RYCINSASLKL P+
Sbjct:   27 GTERAFSGEYHATKTPGIYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDGPRPTGLRYCINSASLKLVPR 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_PSEA7 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain PA7) GN=msrB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 68/104 (65.38%), Postives = 76/104 (73.08%), Query Frame = 3
Query:   45 GTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            GTERAF+GEY  TKTPG YHC CC T LF+S  K+DSG+GWPSY+QP+      +LD     M R EV C  CDAHLGHVF DGP PTG RYCINSASLKL P+
Sbjct:   27 GTERAFSGEYHATKTPGVYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDGEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDGPRPTGLRYCINSASLKLVPR 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_PSEPW (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas putida (strain W619) GN=msrB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 8.243e-35
Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 3
Query:   42 KGTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            KGTER FTG+Y + K  GTYHCICCD PLF+S+TKFDSG GWPS+Y PI  +   +   +   M R EV CA CDAHLGHVF DGPPPTG RYCINS  L  KP+
Sbjct:   26 KGTERPFTGKYNSEKRAGTYHCICCDLPLFDSNTKFDSGCGWPSFYAPIEDSAMIETRDTSHGMIRTEVTCAQCDAHLGHVFPDGPPPTGLRYCINSVCLDFKPR 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_PSEPF (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas fluorescens (strain Pf0-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.406e-34
Identity = 66/103 (64.08%), Postives = 76/103 (73.79%), Query Frame = 3
Query:   48 TERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            TER F+G+Y  TKT G YHCICC+ PLF+S TKFDSG GWPS+Y PIG N  +++  +   M R EV CA CDAHLGHVF DGPPPTG RYCINS  L L P+
Sbjct:   28 TERPFSGKYNATKTDGVYHCICCNEPLFDSKTKFDSGCGWPSFYAPIGDNAMTEIRDTSHGMIRTEVKCAKCDAHLGHVFPDGPPPTGLRYCINSVCLDLVPR 130          
BLAST of EY754128 vs. ExPASy Swiss-Prot
Match: MSRB_PSEF5 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=msrB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.398e-34
Identity = 65/105 (61.90%), Postives = 76/105 (72.38%), Query Frame = 3
Query:   42 KGTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCINSASLKLKPK 356
            KGTER F+G+Y  TKT G YHCICC+ PLF+S  KFDSG GWPS+Y+PI  +   ++      M R EV+CA CDAHLGHVF DGPPPTG RYCINS  L L P+
Sbjct:   26 KGTERPFSGKYNGTKTDGVYHCICCNEPLFDSKAKFDSGCGWPSFYEPIADSAMVEIRDMSHGMIRTEVVCAKCDAHLGHVFPDGPPPTGLRYCINSVCLDLVPR 130          
The following BLAST results are available for this feature:
BLAST of EY754128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
MSRB_THEEB1.229e-3868.87Peptide methionine sulfoxide reductase msrB OS=The... [more]
MSRB_AZOVD1.359e-3765.38Peptide methionine sulfoxide reductase msrB OS=Azo... [more]
MSRB_ACAM17.456e-3666.67Peptide methionine sulfoxide reductase msrB OS=Aca... [more]
MSRB_PSEAE2.833e-3565.38Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEAB2.833e-3565.38Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEA82.833e-3565.38Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEA72.833e-3565.38Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEPW8.243e-3563.81Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEPF1.406e-3464.08Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEF52.398e-3461.90Peptide methionine sulfoxide reductase msrB OS=Pse... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-011-A10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754128 ID=EY754128; Name=EY754128; organism=Citrus sinensis; type=EST; length=534bp
CCACGCGTCCGCACAGGGGAGCAATATTACATAACTCGACAAAAGGGACT
GAGAGGGCTTTTACGGGGGAATATTGGAACACCAAAACCCCTGGTACCTA
CCATTGCATTTGTTGTGACACACCTTTATTCGAATCATCAACCAAATTTG
ACAGTGGTACTGGTTGGCCATCATATTATCAGCCCATAGGAAGCAACATG
AAGTCAAAGTTGGATTTGTCAATTATTTTCATGCCTCGCCAGGAGGTCCT
TTGTGCCGTATGTGATGCTCATCTTGGCCATGTCTTTGATGATGGCCCAC
CACCCACAGGAAAGCGTTACTGTATCAACAGTGCTTCCTTAAAACTGAAG
CCAAAATAGGTATGAATATCAAGCCAGAATACCAGAATGAGCTACATGTA
AATGAACTTCTACTGTTTACACTTGTTAATCAATTTTTCTCTGTGAACTA
CACTTCTATGACAAAATTTTAATATTTTTTATTGCAAAGTATATATCCAA
TACGCTTTTGATGAAAAAAAAAAAANNNAANNAA
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