EY754117

Overview
NameEY754117
Unique NameEY754117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8225 contig Csv1_Contig8225:949..1568. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDH5_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.678e-38
Identity = 76/95 (80.00%), Postives = 89/95 (93.68%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGLTPSCN+GE G+ALAEAVHGSAPDIAGKNLANPTALLLS V MLRHL+ +++A++I +AI++TIAEGKYRTADLGGSSTT++FTKAICDHL
Sbjct:  280 GGLGLTPSCNIGEDGVALAEAVHGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDH6_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.423e-37
Identity = 77/95 (81.05%), Postives = 87/95 (91.58%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGLTPS N+GE GIALAEAVHGSAPDIAG NLANPTALLLS V MLRHL+L+ +A++I +AI++TIAEGKYRTADLGGSSTT+DFTKAICDHL
Sbjct:  280 GGLGLTPSMNIGEDGIALAEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQIHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL 374          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_SOLTU (3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.869e-30
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGK 218
            G LGLTPSCN+GEGGIALAEAVHGSAPDIAGKNLANPTALLLSSV+MLRHLELHDKADRIQ+AIL TIA GK
Sbjct:  273 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVSMLRHLELHDKADRIQDAILKTIAGGK 344          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDH3A_DROME (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=l(1)G0156 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGLTPS N+G  G AL E+VHG+APDIAGK+LANPTALLLS+V MLRH+EL+  AD+I+ A   TI EGKY T DLGG +  S+FT  IC  L
Sbjct:  284 GGLGLTPSGNMGLNG-ALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDH3A_BOVIN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos taurus GN=IDH3A PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 278
            G LG+TPS N+G  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG+S  SDFT+ IC
Sbjct:  268 GGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIETACFATIKDGKSLTKDLGGNSKCSDFTEEIC 359          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.629e-25
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFT 266
            G LGLTPS N+GE G A+ EAVHG+APDIAGKN ANPTAL+LSS+ MLRHL    +A  I+NA+L+T+ EGK +T DLGG+S+ S++T
Sbjct:  254 GGLGLTPSGNIGENGSAIFEAVHGTAPDIAGKNKANPTALILSSIMMLRHLGHFHEASIIENAVLNTLTEGKVKTGDLGGNSSCSEYT 341          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDH3A_PONAB (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Pongo abelii GN=IDH3A PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.739e-25
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 278
            G LG+TPS N+G  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  268 GGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDH3A_MACFA (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.739e-25
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 278
            G LG+TPS N+G  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  249 GGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 340          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDH3A_HUMAN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo sapiens GN=IDH3A PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.739e-25
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 278
            G LG+TPS N+G  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  268 GGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: IDH3A_MOUSE (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus GN=Idh3a PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.056e-24
Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 278
            G LG+TPS N+G  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  268 GGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
The following BLAST results are available for this feature:
BLAST of EY754117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
IDH5_ARATH1.678e-3880.00Isocitrate dehydrogenase [NAD] catalytic subunit 5... [more]
IDH6_ARATH2.423e-3781.05Isocitrate dehydrogenase [NAD] catalytic subunit 6... [more]
LEU3_SOLTU2.869e-3091.673-isopropylmalate dehydrogenase, chloroplastic OS=... [more]
IDH3A_DROME1.629e-2564.21Probable isocitrate dehydrogenase [NAD] subunit al... [more]
IDH3A_BOVIN2.778e-2560.87Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDHA_DICDI3.629e-2563.64Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
IDH3A_PONAB4.739e-2560.87Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_MACFA4.739e-2560.87Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_HUMAN4.739e-2560.87Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_MOUSE1.056e-2459.78Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-H06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754117 ID=EY754117; Name=EY754117; organism=Citrus sinensis; type=EST; length=620bp
TTGGTGTATTGGGCTTAACACCTAGTTGCAACCTTGGGGAAGGAGGAATT
GCCCTTGCTGAAGCTGTTCATGGTTCAGCACCTGATATTGCTGGAAAGAA
TTTGGCAAATCCAACTGCTTTGCTGTTGAGTTCGGTAACAATGTTGCGCC
ATTTGGAGCTCCATGACAAGGCTGATAGGATCCAAAATGCTATCCTGAGC
ACAATTGCAGAGGGGAAGTATCGAACTGCAGATCTTGGTGGCTCTTCAAC
GACATCAGATTTCACAAAGGCAATCTGCGATCATCTTTAAATATTTCTTT
CTACATAGAATTTGAATTCGTGTTCAAGATTTACATTCTACCTTTCTTTT
TTTGAGCAATGTCTCAAATTTGTTTTTTTCCCCCCTTTTTAAAGTGTTTT
TCTTTGAGGGGAATAAGACCCATCACCTTGGTGACTATTTAGAAGTTTTT
TTCTGATGAAACTGTTCAGCCAGAGTGTATATGGCCGTCCTCAGAAAAGG
TATTTATACGGCAATATTTATTTCCTCGCTGTCTGTGAAATTCCAAAAAT
TGAACTAACCGATCTTGAGAAAATTGTTCACAGCGTGTGTTGTCAAAAAA
AAAAAAAAAAAAAAAAAAAA
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