EY754065

Overview
NameEY754065
Unique NameEY754065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9358 contig Csv1_Contig9358:41..965. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY754065 vs. ExPASy Swiss-Prot
Match: HDHD3_XENLA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.277e-13
Identity = 63/203 (31.03%), Postives = 90/203 (44.33%), Query Frame = 3
Query:  279 DAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG-------RPFWQFIVSSS---TGCSDSQYFE----ELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVXDDRXNDVWGARDASCDAWL 845
            D   TLL    P+ Q Y    +K G+  +   +   +R AY      SRL + N G       R +W  +V  +   +G  DS   +    +LY  ++T   W L  P A +   +    G+++AV+SNFD RL  +LR    + +FD           KP+  IF KA  L  V P  AVHV DD  ND   AR     ++L
Sbjct:    9 DVKDTLLRVRVPVGQQYYAEAKKRGLCVNPGTLETSFRNAYRSH---SRL-FPNYGLAQGMSSRQWWLDVVLQTFRLSGIEDSDTVQSLAKQLYQDFSTAHNWALV-PGAREALDSCTNLGLRMAVISNFDRRLEELLRQCCLERYFDFVVTAESAGVAKPHLGIFHKALSLAKVPPHQAVHVGDDYVNDYCAARMVGMHSYL 206          
BLAST of EY754065 vs. ExPASy Swiss-Prot
Match: HDHD3_MOUSE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus GN=Hdhd3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 57/204 (27.94%), Postives = 90/204 (44.12%), Query Frame = 3
Query:  264 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG---RPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVXDDRXNDVWGARDASCDAWL 845
            + L  D   TL+   +P+ + Y      +GV   +  +   +R+AY           ++ G   R +W+ +V  +    G  D+Q      ++LY  +++   W + +  AE   K  RK G+KLAVVSNFD RL  +L  L     FD           KP+P IF +A     V+P  A HV D    D  G++     ++L
Sbjct:    8 RLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSRQWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEG-AEMTLKGCRKRGLKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRACVEPAVAAHVGDSYLCDYQGSQAVGMHSFL 210          
BLAST of EY754065 vs. ExPASy Swiss-Prot
Match: HDHD3_BOVIN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus GN=HDHD3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 56/204 (27.45%), Postives = 87/204 (42.65%), Query Frame = 3
Query:  264 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVXDDRXNDVWGARDASCDAWL 845
            + L  D   TLL    P+   Y      +G+      +   +++AY+   Q +    L +      +W  +V  +    G  D+Q      E+LY  +++   W + +  AE   +  RK G+KLAVVSNFD RL  +L  +     FD           KP+P IF +A  L  V+P    H+ D    D  GAR     ++L
Sbjct:    8 RLLTWDVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSHQWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEG-AEATLRGCRKRGLKLAVVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEALHLAQVEPAVGAHIGDSYQRDYKGARAVGMHSFL 210          
BLAST of EY754065 vs. ExPASy Swiss-Prot
Match: HDHD3_HUMAN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens GN=HDHD3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12
Identity = 56/204 (27.45%), Postives = 87/204 (42.65%), Query Frame = 3
Query:  264 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVXDDRXNDVWGARDASCDAWL 845
            + L  D   TLL    P+ + Y      +G+    + +   +R+AY      +    L +    R +W  +V  +    G  D+Q      E+LY  ++    W + D  AE   +  R  G++LAV+SNFD RL  +L  L     FD           KP+P IF +A  L  ++P  A HV D+   D  G R     ++L
Sbjct:    8 RLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDG-AEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFL 210          
The following BLAST results are available for this feature:
BLAST of EY754065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
HDHD3_XENLA1.277e-1331.03Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_MOUSE4.854e-1327.94Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_BOVIN1.081e-1227.45Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_HUMAN5.367e-1227.45Haloacid dehalogenase-like hydrolase domain-contai... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-C07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754065 ID=EY754065; Name=EY754065; organism=Citrus sinensis; type=EST; length=927bp
CGNATTACAAGCTCGACCCACGCGTCCGATGAAGTTTTAGAATGGCTCTA
ATGGCAACGACACTAAGAACCAAACTCCGTAGACTCATTGCAAGTGCTAG
TAATCGCAGCAATGGCTCAATCTCAATCTCAATCTGCCGCCAGTTATCTT
CGGCGACGGAAGCAGCAGAGGCCGTTGGATCAAGAGGCGTGGTGGGTTTG
GGGGTATTTGGATTGAAAGACTATGAAGATTATAGGCGTTCTCTTTATGG
AGACATCACACATAAAGCTTTGCTCGTTGACGCTGCTGGTACTCTCCTTG
TTCCTTCTCAGCCCATGGCCCAGATATATAGAGAGATTGGAGAGAAGTAT
GGTGTTGCCTACTCTGAGGCTGAGATATTGAACAGATACAGAAGGGCTTA
TGAGCAGCCATGGGGAGGATCTCGTCTCAGATATGTGAATGATGGGAGAC
CCTTCTGGCAATTTATAGTTAGTTCGTCGACTGGTTGTTCAGATTCCCAG
TATTTTGAAGAACTTTATAACTACTATACCACTGAAAAGGCATGGCACCT
CTGTGATCCTGAAGCTGAAAAGGTATTTAAGGCTATCAGAAAAGCAGGAG
TCAAATTGGCTGTTGTGTCAAACTTTGATACTCGGTTAAGACCTGTGTTG
CGAGCTCTAAATTGTGATCATTGGTTCGATGCTGTTGCAGTGTCAGCTGA
AGTTGAAGCAGAGAAGCCAAATCCAACAATATTCCTAAAAGCCTGTGATT
TGTTGGGAGTAAAACCTGANGATGCTGTACATGTANGGGATGATCGTANG
AATGATGTGTGGGGTGCCAGGGATGCCAGTTGTGATGCTTGGCTTTGGGG
AAATGAGTCACTCCTTTAAGGAGGTGCTCAAAGGAAGGGGTCAAAGTTAA
AGAAAAGCTGATCTTAACCCACGCTCA
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