EY727807

Overview
NameEY727807
Unique NameEY727807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727807 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.378e-44
Identity = 85/152 (55.92%), Postives = 116/152 (76.32%), Query Frame = 1
Query:   97 AAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTEENTCTDGFGGKALEGKVKSSGKAQGV 552
            A+     +FI++SC  TTYPA+C QSLSAYA +IQ +P++LA TAL VSL+R Q A++F+ +L KF+ LK R+Y AI DCL+E+ D++DR+S+S  E+ ++  AKG DF + MSNVETWVSAALT+E TC DGF GK ++GK+K S +AQ V
Sbjct:   20 ASAAPANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVV 171          
BLAST of EY727807 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 42/127 (33.07%), Postives = 72/127 (56.69%), Query Frame = 1
Query:  124 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTEENTCTDGF 498
            ++SSC ST YP LC  +++A   + ++   Q  V  +S++++      ++  + KL K  NL  RE  A+ DCL+ + +T+D L K+V++L      K      H  +++T +SAA+T + TC DGF
Sbjct:   69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKK--SLSQHADDLKTLMSAAMTNQGTCLDGF 193          
BLAST of EY727807 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 42/127 (33.07%), Postives = 72/127 (56.69%), Query Frame = 1
Query:  124 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTEENTCTDGF 498
            ++SSC ST YP LC  +++A   + ++   Q  V  +S++++      ++  + KL K  NL  RE  A+ DCL+ + +T+D L K+V++L      K      H  +++T +SAA+T + TC DGF
Sbjct:   69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKK--SLSQHADDLKTLMSAAMTNQGTCLDGF 193          
BLAST of EY727807 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.210e-11
Identity = 40/138 (28.99%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  124 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTEENTCTDGFGGKALEGKVKSS 534
            +RSSC ST YP LC+ ++         S + +   +++++++  +     V KL +K + L  RE  A+ DCL+ + +T+D L ++V++L H+   K +    H  +++T +S+A+T + TC DGF     + +V+ +
Sbjct:   59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDL-HLYPTK-KTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKA 194          
BLAST of EY727807 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 43/126 (34.13%), Postives = 64/126 (50.79%), Query Frame = 1
Query:  124 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTEENTCTDGFG 501
            +++ C +T YP+ C  S+S+   S    P  L   +L V++    S   F +KLR       R  +AI  C    GD +DRL+ S+  L  +           +SNVETW+SAALT+++TC D  G
Sbjct:   77 LKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAIDELSS---FPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSA--SVSNVETWLSAALTDQDTCLDAVG 197          
BLAST of EY727807 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.887e-11
Identity = 41/149 (27.52%), Postives = 76/149 (51.01%), Query Frame = 1
Query:   91 VTAAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTEENTCTDGFGGKALEGKVKSS 534
            +T         ++S C ST YP LC  +++A       S +++   +L+++    +     V KL  K + L  RE  A+ DCL+ + +T+D L  +V++L+   + K      H  +++T +S+A+T + TC DGF     + KV+ +
Sbjct:   51 ITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKS--LRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKA 197          
The following BLAST results are available for this feature:
BLAST of EY727807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
21KD_DAUCA3.378e-4455.9221 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME3_CITSI2.361e-1333.07Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI2.361e-1333.07Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME3_ARATH2.210e-1128.99Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME3_PHAVU2.887e-1134.13Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME2_ARATH2.887e-1127.52Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-105-H11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727807 ID=EY727807; Name=EY727807; organism=Citrus sinensis; type=EST; length=973bp
CAAGCAGAAAGCTTTTAATTAGTTTCTGAAAACATGGCAAAAACAGGCTG
TCTTTTGCTATTGCTCTCTCTCCTCTACATTATAAGCTTGGTCACAGCTG
CCGGGATTGCTGACACAAGATTTATCAGAAGTTCTTGCAAATCCACAACT
TATCCAGCGCTGTGCGTGCAGTCTCTCTCAGCTTATGCCCCATCAATTCA
ACAAAGCCCCCGGCAACTGGCTGTCACAGCCTTGTCCGTGAGCCTCTCCA
GGGCCCAATCCGCAAAGTCATTCGTGACCAAGCTGAGGAAGTTCAGGAAC
CTGAAGCACAGAGAGTATGAGGCGATTGCCGACTGCTTGGATGAGATGGG
TGACACTGTGGACCGGCTCAGCAAGTCGGTTCAGGAGCTGAACCACATGG
GTCAGGCCAAGGGTCAGGACTTTCTGTGGCACATGAGCAACGTTGAGACA
TGGGTTAGTGCTGCTTTGACTGAAGAAAACACTTGTACTGATGGGTTCGG
GGGCAAGGCCTTGGAAGGTAAGGTTAAATCCTCTGGTAAGGCTCAGGGTG
TTTAAGGTTGCTCATGTCACTAACAATGGCCCTTTCACTGATCAAAAAAT
TTTGCTGGGGAAACACTGGACCCCGAAATTTAACCCATTAGGGGGGGGGG
GAAAAGGTTTGGGAAAAGTTTGGGGTCCCTTTTTTACTTTTGGTTTAAGT
TTTAAATGGGACAAATTTAATCCTCCCGTTTAAAAGGGGAGGGGTTAATT
TTTGGAACTTAACCTAATAAAATAGGAATTTATTTGGAAAAGGAGCCAAA
AAATTTTTTGGGTCTTTTTTAAGGGAAAAAAATTTTTTATTTTGAAAAAA
ATTGGAAAAGGAGAAAACCCGCGGCTGTTTAAGCGGGGGTGTATTTCTTT
GGAATTTATAGGGAGGGGGGGGGTTTTTCCCAAAAACACAAAAACCCCCC
CCTTGTTGGGGGAGAGGAGGGAG
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