EY727803

Overview
NameEY727803
Unique NameEY727803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: YKWC_BACSU (Uncharacterized oxidoreductase ykwC OS=Bacillus subtilis GN=ykwC PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.318e-25
Identity = 75/215 (34.88%), Postives = 111/215 (51.63%), Query Frame = 1
Query:   16 IGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGRIRSSKVKSPFCPHGES*LHGWQWERTIREAGESNHDRFQQGVGLWEG-----KGLCLTRQG*MWEINFLNAITTGS 645
            IG+IG GVMG+SM +H+LN G+ V V+ RT  KA+ +L  GA   D+   L+ ++DV+ ++VGYPSDV  V    S+G +   + G  ++DMTT               K   A+DAPVSGGD GA+ GTLAI  GG +         F   GE+     Q++     AG   H +    + +  G     + +   ++  +   N L +ITTG+
Sbjct:    5 IGFIGLGVMGKSMASHILNDGHPVLVYTRTKEKAESILQKGAIWKDTVKDLSKEADVIITMVGYPSDVEEVYF-GSNGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKEKALFALDAPVSGGDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGEN----IQYQ---GPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLEPENVLKSITTGA 211          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: Y1503_SHEFN (Uncharacterized oxidoreductase Sfri_1503 OS=Shewanella frigidimarina (strain NCIMB 400) GN=Sfri_1503 PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 6.532e-20
Identity = 58/149 (38.93%), Postives = 79/149 (53.02%), Query Frame = 1
Query:   10 ARIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKA-QPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGRIRSSKVK 453
            A++ +IG GVMG  M  HL+  G+ VTV+NRT +KA Q +   G   AD+P   A   D+VF+ VG   D+R V+L    G + G+  G I+VD TT                N + +DAPVSGG  GA+ G L +  GG +     VK
Sbjct:    2 AKVAFIGLGVMGFPMAGHLVKQGHDVTVYNRTGAKATQWVEQYGGKKADTPKDAAQGQDIVFTCVGNDDDLRQVVL-GEHGIVHGMHAGAILVDHTTASADVAREIAAYIEPLNIAFLDAPVSGGQAGAENGALTVMMGGDQAHFDTVK 149          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: GARR_ECOLI (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=garR PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.360e-19
Identity = 44/140 (31.43%), Postives = 76/140 (54.29%), Query Frame = 1
Query:   13 RIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGR 432
            ++G+IG G+MG+ M  +LL AGY++ V +R       ++  GA  A +  ++A Q DV+ +++     V+ V L   +G + G +PG +++DM++               K    +DAPVSGG+  A  GTL++  GG +
Sbjct:    2 KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVAL-GENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDK 140          

HSP 2 Score: 32.7278 bits (73), Expect = 1.360e-19
Identity = 17/43 (39.53%), Postives = 24/43 (55.81%), Query Frame = 2
Query:  425 GDESVVQKLNPLF-ALMGKVNYMGGSGKGQFAKLANQITIAFN 550
            GD+++  K   L  A+ G V + G  G G   KLANQ+ +A N
Sbjct:  138 GDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALN 180          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: GARR_ECOL6 (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6 GN=garR PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.360e-19
Identity = 44/140 (31.43%), Postives = 76/140 (54.29%), Query Frame = 1
Query:   13 RIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGR 432
            ++G+IG G+MG+ M  +LL AGY++ V +R       ++  GA  A +  ++A Q DV+ +++     V+ V L   +G + G +PG +++DM++               K    +DAPVSGG+  A  GTL++  GG +
Sbjct:    2 KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVAL-GENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDK 140          

HSP 2 Score: 32.7278 bits (73), Expect = 1.360e-19
Identity = 17/43 (39.53%), Postives = 24/43 (55.81%), Query Frame = 2
Query:  425 GDESVVQKLNPLF-ALMGKVNYMGGSGKGQFAKLANQITIAFN 550
            GD+++  K   L  A+ G V + G  G G   KLANQ+ +A N
Sbjct:  138 GDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALN 180          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: GLYR1_DANRE (Putative oxidoreductase GLYR1 OS=Danio rerio GN=glyr1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.092e-18
Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = 1
Query:   13 RIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGR 432
            RIG++G G+MG  + ++LL  G+ VTV+NRT  K    +  GA L  +P  + S  D+ FS V  P   R ++L P SG L G+RPG   V+M+T               +    ++APVSG  + +  G L I A G R
Sbjct:  177 RIGFLGLGLMGSGVVSNLLKMGHVVTVWNRTAEKCDLFIQEGARLGRTPAEVVSMCDITFSCVSDPKAARDLVLGP-SGVLQGIRPGKCYVEMSTVDPETITELSQVITSRGGRFLEAPVSGSQQLSNDGMLVIVAAGDR 315          

HSP 2 Score: 22.7126 bits (47), Expect = 4.092e-18
Identity = 10/33 (30.30%), Postives = 16/33 (48.48%), Query Frame = 2
Query:  425 GDESVVQKLNPLFALMGKVNYMGGSGKGQFAKL 523
            GD SV +  +  F  MGK ++      G  A++
Sbjct:  313 GDRSVYEDCSSCFQAMGKTSFFIAGEAGNAARM 345          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: GLYR1_XENTR (Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.966e-18
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 1
Query:   13 RIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGG 426
            +IG++G G+MG  + ++LL  G+TVTV+NRT  K    +  GAH+  +P  + S  D+ F+ V  P   + ++L P SG L G+RPG   VDM+T               +    ++APVSG  + +  G L I A G
Sbjct:  250 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAHMGRTPAEVVSTCDITFACVADPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDPETVAELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAG 386          

HSP 2 Score: 20.7866 bits (42), Expect = 8.966e-18
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 2
Query:  425 GDESVVQKLNPLFALMGKVNYMGG 496
            GD+ V +  +  F  MGK ++  G
Sbjct:  386 GDQGVYEDCSSCFLAMGKTSFFLG 409          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: GLYR1_RAT (Putative oxidoreductase GLYR1 OS=Rattus norvegicus GN=Glyr1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.323e-17
Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = 1
Query:   13 RIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGR 432
            +IG++G G+MG  + ++LL  G+TVTV+NRT  K    +  GA L  +P  + S  D+ F+ V  P   + ++L P SG L G+RPG   VDM+T               +    ++APVSG  + +  G L I A G R
Sbjct:  268 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDR 406          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: GLYR1_HUMAN (Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 2.323e-17
Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = 1
Query:   13 RIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGR 432
            +IG++G G+MG  + ++LL  G+TVTV+NRT  K    +  GA L  +P  + S  D+ F+ V  P   + ++L P SG L G+RPG   VDM+T               +    ++APVSG  + +  G L I A G R
Sbjct:  269 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDR 407          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: GLYR1_CHICK (Putative oxidoreductase GLYR1 OS=Gallus gallus GN=GLYR1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.323e-17
Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = 1
Query:   13 RIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGR 432
            +IG++G G+MG  + ++LL  G+TVTV+NRT  K    +  GA L  +P  + S  D+ F+ V  P   + ++L P SG L G+RPG   VDM+T               +    ++APVSG  + +  G L I A G R
Sbjct:  269 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDR 407          
BLAST of EY727803 vs. ExPASy Swiss-Prot
Match: GLYR1_BOVIN (Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLYR1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.323e-17
Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = 1
Query:   13 RIGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGGR 432
            +IG++G G+MG  + ++LL  G+TVTV+NRT  K    +  GA L  +P  + S  D+ F+ V  P   + ++L P SG L G+RPG   VDM+T               +    ++APVSG  + +  G L I A G R
Sbjct:  269 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDR 407          
The following BLAST results are available for this feature:
BLAST of EY727803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
YKWC_BACSU2.318e-2534.88Uncharacterized oxidoreductase ykwC OS=Bacillus su... [more]
Y1503_SHEFN6.532e-2038.93Uncharacterized oxidoreductase Sfri_1503 OS=Shewan... [more]
GARR_ECOLI1.360e-1931.432-hydroxy-3-oxopropionate reductase OS=Escherichia... [more]
GARR_ECOL61.360e-1931.432-hydroxy-3-oxopropionate reductase OS=Escherichia... [more]
GLYR1_DANRE4.092e-1836.43Putative oxidoreductase GLYR1 OS=Danio rerio GN=gl... [more]
GLYR1_XENTR8.966e-1835.51Putative oxidoreductase GLYR1 OS=Xenopus tropicali... [more]
GLYR1_RAT2.323e-1735.71Putative oxidoreductase GLYR1 OS=Rattus norvegicus... [more]
GLYR1_HUMAN2.323e-1735.71Putative oxidoreductase GLYR1 OS=Homo sapiens GN=G... [more]
GLYR1_CHICK2.323e-1735.71Putative oxidoreductase GLYR1 OS=Gallus gallus GN=... [more]
GLYR1_BOVIN2.323e-1735.71Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLY... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-105-H07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727803 ID=EY727803; Name=EY727803; organism=Citrus sinensis; type=EST; length=1056bp
CACGCGTCCGCCCGCATCGGCTGGATCGGCACAGGCGTCATGGGTCGATC
CATGTGCGCCCACTTACTCAACGCCGGCTACACCGTCACCGTCTTCAACC
GCACCCTCTCCAAGGCCCAGCCTCTCCTCGACATCGGTGCCCACCTCGCC
GACTCCCCCCATTCGCTCGCTTCCCAATCCGACGTCGTTTTCTCCATAGT
CGGCTACCCTTCCGACGTCCGCCACGTCCTCCTCCACCCCTCTTCCGGCG
CCCTCTCTGGCCTTCGTCCCGGTGGAATCATCGTCGACATGACCACCTCC
GAACCCTCCCTCGCCTCCGAGTTATCCGCCGCCGCCTCCTCCAAAAACTG
CTCCGCCATCGACGCCCCTGTGTCCGGCGGTGACCGCGGCGCCAAAACCG
GAACCCTCGCTATATTCGCCGGAGGGGGACGAATCCGTAGTTCAAAAGTT
AAATCCCCTTTTTGCCCTCATGGGGAAAGTTAATTACATGGGTGGCAGTG
GGAAAGGACAATTCGCGAAGCTGGCGAATCAAATCACGATCGCTTTCAAC
AAGGGGTTGGATTATGGGAAGGGAAGGGTTTATGCCTCACAAGGCAGGGC
TAAATGTGGGAAATTAATTTTTTAAACGCCATTACCACGGGGAGCTGGAG
GTTCCCAAAGTCGCTGGGACTTGTACGGGGAAAAGAAAACTAAAAAAAAA
AAATTTTGGAACCCGGGGTTTTATTGTGAATCCTTTTTTGGGGAAAAAAA
TTGGGGGAATTTTGGTTAAAAAAAAAGGGTCAAAAAAGGGGGGGTGTGGT
TTACCGGGGGGGGGGGTCGGGGCTCAACCAGATTTTTATTGGCCCCTAAA
AGGGCTCGGGGGGGAAAGGGATTTTTGGGGAACACACAATTTTTATATTT
TGGGCCTCTCCAAAAAAAGTATAAATAAGAGGTGCCCCCATTGAAATAAA
GGGGGCTGCCCCGGCCCCCAACCCGACCGCCATCAATTAAAATAGGGGAG
TAATTGGAGAGAAAAAAAACCACCGACCACCAATAAAAAAAAAAAAAACT
ATATTG
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