EY754037

Overview
NameEY754037
Unique NameEY754037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5214 contig Csv1_Contig5214:620..1362. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY754037 vs. ExPASy Swiss-Prot
Match: Y4634_ARATH (Uncharacterized zinc finger protein At4g06634 OS=Arabidopsis thaliana GN=At4g06634 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.411e-36
Identity = 86/176 (48.86%), Postives = 103/176 (58.52%), Query Frame = 1 
Query:   43 PRNATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM-----SXXXXXXXXXXXXXXMDEGSDQDAYAGKRVNGKSQ---KQSRAKPNLKMPPAKVTQRKSSTPSPATLNVVRKQQWTPK-----XXXXXXXXXXXXXXDRDNVEDGFRYGQNN 531
            P+   P E++ +T K PA V G  SS+RPYACPYEGCEKAYIHEYKLKLHLKREHPGH+                    +D+GSDQD Y     NGK Q   +QSRAKPN++ PPAKV  +K ST SPA   + +K  W  K                   DRDNVEDG+R+G+NN
Sbjct:  202 PKYTPPAEKVLRTVKTPATVCGP-SSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADTPTLNKHNGNDRNEIDDGSDQDVYRKHASNGKGQTHKQQSRAKPNMRTPPAKV-GKKGSTSSPAKARIAKK-PWQAKETFEEVEREEEEDSEETEEDRDNVEDGWRFGENN 374
The following BLAST results are available for this feature:
BLAST of EY754037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4634_ARATH6.411e-3648.86Uncharacterized zinc finger protein At4g06634 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-H09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754037 ID=EY754037; Name=EY754037; organism=Citrus sinensis; type=EST; length=743bp
ANATATTGTTTGGNACCACGAAAAGAAGAAGCACCCGGAGNGCCCAGAAA
CGCTACTCCTCCCGAGAGGATAACAAAAACTCCCAAGCCACCTGCTGGGG
TTTATGGTTCTGCATCATCTGAACGTCCTTATGCATGTCCTTATGAAGGG
TGTGAAAAGGCATATATCCATGAATACAAGCTTAAACTCCATCTGAAGCG
GGAGCATCCCGGCCATATGTCTGATGAAAATGCCGAGAATGCCACAACAA
ATGCTGATAATGAGATGGATGAAGGCAGTGACCAAGATGCCTATGCTGGA
AAACGTGTTAATGGCAAAAGTCAAAAACAAAGCCGGGCGAAGCCAAACTT
GAAGATGCCTCCTGCAAAAGTAACGCAACGCAAAAGCTCAACTCCATCTC
CTGCCACCTTGAATGTAGTGAGAAAGCAACAATGGACTCCTAAAGAAGAA
GTTTACGAGGAAGAAGAAAGTGAAGAAACTGAGGAAGATCGTGACAATGT
TGAGGATGGATTTAGGTACGGGCAAAATAATGAAGATGATGATGAGGAGA
CTGAGTACGAAGACTGAAGCATATAAAAATGTTTCCTTCACCCTTCTGGA
AAGGGCACCTTGTATGTATCTAACCCTTACAAACAGGTTCTCTGTCATCT
TTTATCTGCTTGCTTTCAGCATCTTTTTTTCTCTCATTGCAGCATATAAA
TAAAATTAAAAATTTTTAAATTTAAAAAAAAAAAAAAAAAAAA
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