EY753891

Overview
NameEY753891
Unique NameEY753891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 3.227e-99
Identity = 179/203 (88.18%), Postives = 189/203 (93.10%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCCST 737
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVGNK DLT  KVV+ ETAKAFADE+GIPFMETSAK++ NV+QAFMAM A IK+RMASQPA    RP TV I+GQPVNQK SCCS+
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPATVQIRGQPVNQKTSCCSS 203          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3)

HSP 1 Score: 360.533 bits (924), Expect = 7.189e-99
Identity = 175/203 (86.21%), Postives = 188/203 (92.61%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCCST 737
            MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQDGKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTD+ESFNNVKQWL+EIDRYAS+NVNKLLVGNK DLT+ + + YETAKAFADEIGIPFMETSAKD+ NVEQAFMAM+A IK RMASQPA    RPPTV I+GQPV QK  CCST
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQIRGQPVAQKNGCCST 203          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2)

HSP 1 Score: 356.681 bits (914), Expect = 1.038e-97
Identity = 172/202 (85.15%), Postives = 185/202 (91.58%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCCS 734
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQDGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL + +VVSYE  KA ADEIGIPF+ETSAKD+ NVE+AFM M  +IKNRMASQPA    +P TV ++GQPV Q+ SCCS
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQPVAQQSSCCS 202          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.229e-90
Identity = 166/202 (82.18%), Postives = 177/202 (87.62%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTV-XIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRTVE DGK +KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK DLT KKVV Y  AKAFADEIGIPF+ETSAK++ NVEQAFM M A+IKNRMASQP       P V   +G+P+N K S C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQEGKPINSKSSSC 202          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 7.967e-90
Identity = 165/202 (81.68%), Postives = 177/202 (87.62%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTV-XIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRTVE DGK +KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNK DLT KKVV Y+ AKAFADEIGIPF+ETSAK++ NVEQAFM M A+IKNRMASQP       P V   +G+P+N K S C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPPKPGGPVVRPTEGKPINNKSSSC 202          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3)

HSP 1 Score: 320.472 bits (820), Expect = 8.245e-87
Identity = 157/201 (78.11%), Postives = 169/201 (84.08%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM             V I+  PV Q G  C
Sbjct:    4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3)

HSP 1 Score: 320.472 bits (820), Expect = 8.245e-87
Identity = 157/201 (78.11%), Postives = 169/201 (84.08%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM             V I+  PV Q G  C
Sbjct:    4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3)

HSP 1 Score: 320.472 bits (820), Expect = 8.245e-87
Identity = 157/201 (78.11%), Postives = 169/201 (84.08%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM             V I+  PV Q G  C
Sbjct:    4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3)

HSP 1 Score: 320.472 bits (820), Expect = 8.245e-87
Identity = 157/201 (78.11%), Postives = 169/201 (84.08%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM             V I+  PV Q G  C
Sbjct:    4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.837e-86
Identity = 157/201 (78.11%), Postives = 168/201 (83.58%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KKVV Y TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM             V I+  PV   G  C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNIQSTPVKSSGGGC 201          
The following BLAST results are available for this feature:
BLAST of EY753891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YPTM2_MAIZE3.227e-9988.18GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=... [more]
RBD2A_ARATH7.189e-9986.21Ras-related protein RABD2A OS=Arabidopsis thaliana... [more]
RIC1_ORYSJ1.038e-9785.15Ras-related protein RIC1 OS=Oryza sativa subsp. ja... [more]
YPTC1_CHLRE1.229e-9082.18GTP-binding protein YPTC1 OS=Chlamydomonas reinhar... [more]
YPTV1_VOLCA7.967e-9081.68GTP-binding protein yptV1 OS=Volvox carteri GN=YPT... [more]
RAB1A_RAT8.245e-8778.11Ras-related protein Rab-1A OS=Rattus norvegicus GN... [more]
RAB1A_MOUSE8.245e-8778.11Ras-related protein Rab-1A OS=Mus musculus GN=Rab1... [more]
RAB1A_HUMAN8.245e-8778.11Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1... [more]
RAB1A_CANFA8.245e-8778.11Ras-related protein Rab-1A OS=Canis familiaris GN=... [more]
RAB1_DISOM1.837e-8678.11Ras-related protein ORAB-1 OS=Discopyge ommata PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753891 ID=EY753891; Name=EY753891; organism=Citrus sinensis; type=EST; length=893bp
ATTTTGCTTTTTTCGTCAAATTCTCTCTCAATCTCACATCCTTAGCTTGT
CTGTGCCAAACTCCCGGTCCAATCTCCAGCTGGACCGGTTCGATTCTGCG
CGAACCCCCTCAACATCTTATTGCAGTCATGAATCCTGAATATGACTACT
TGTTCAAGCTTTTGCTGATTGGAGATTCTGGAGTTGGCAAATCATGTCTT
CTTCTGAGATTTGCTGATGATTCGTACCTGGACAGTTACATTAGCACTAT
TGGGGTTGACTTTAAAATTCGCACAGTGGAGCAAGACGGGAAGACTGTAA
AACTCCAAATTTGGGACACTGCAGGGCAAGAACGATTCAGGACAATCACT
AGCAGCTACTACCGTGGAGCACATGGCATTATTATTGTTTATGATGTTAC
AGACCAAGAGAGCTTCAACAACGTTAAGCAGTGGTTGAATGAAATTGATC
GCTATGCAAGTGAAAATGTAAACAAGCTTCTGGTTGGAAACAAGTGTGAT
CTCACTGATAAGAAAGTTGTCTCTTATGAAACAGCGAAGGCATTTGCTGA
TGAAATTGGCATCCCGTTCATGGAGACCAGCGCAAAGGATTCTTTGAACG
TGGAACAAGCTTTTATGGCTATGACTGCTGACATTAAGAACAGGATGGCA
AGTCAACCTGCAATGAAAACATGCAGGCCACCAACTGTGCANATAAAAGG
ACAACCGGTGAACCAGAAGGGCAGCTGCTGCTCAACTAANTCATTTGGCT
TATCCTTCATGGCGNNGCATTATTTATGGGGTAGCTTCTCAATCCCGTTG
AAGGACCAGTGAAAAACTATTCCTACCCATGAATATATGACGGATTGCTT
ACTAGTTTTTGGAAGTATTGGGAAATTCCATTCTTCAGCCATA
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