EY753849

Overview
NameEY753849
Unique NameEY753849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753849 vs. ExPASy Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26
Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 3 
Query:  384 SCGNDFAPKPRKPYTITKQRERWTEEEHKKFLEALKLFGRAWRKIEEHVGTKTAVQIRSHAQKFFSKV 587
            S G D   K RKPYTITKQRERWTEEEH +F+EAL+L+GRAW+KIEEHV TKTAVQIRSHAQKFFSKV
Sbjct:    5 SSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKV 72
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BLAST of EY753849 vs. ExPASy Swiss-Prot
Match: LHY_ARATH (Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.939e-25
Identity = 51/71 (71.83%), Postives = 63/71 (88.73%), Query Frame = 3 
Query:  375 DQFSCGNDFAPKPRKPYTITKQRERWTEEEHKKFLEALKLFGRAWRKIEEHVGTKTAVQIRSHAQKFFSKV 587
            D  + G +   K RKPYTITKQRERWTE+EH++FLEAL+L+GRAW++IEEH+GTKTAVQIRSHAQKFF+K+
Sbjct:    2 DTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKL 72
[Close]
BLAST of EY753849 vs. ExPASy Swiss-Prot
Match: MYBG_DICDI (Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19
Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 3 
Query:  408 KPRKPYTITKQRERWTEEEHKKFLEALKLFGRAWRKIEEHVGTKTAVQIRSHAQKFFSKV 587
            K RKPYTI+KQRE WT+EEH+KFLEAL LF R W+KIE  VG+KT +QIRSHAQK+F KV
Sbjct:   30 KSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKV 89
The following BLAST results are available for this feature:
BLAST of EY753849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CCA1_ARATH4.653e-2680.88Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 ... [more]
LHY_ARATH3.939e-2571.83Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV... [more]
MYBG_DICDI1.450e-1973.33Myb-like protein G OS=Dictyostelium discoideum GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-F05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753849 ID=EY753849; Name=EY753849; organism=Citrus sinensis; type=EST; length=881bp
CGTTTGAAATCATCTTTTTCTTTTTCCCTTTTTTGACAAAGAGGAAGTGT
AATTTCTGTTTGTTTGAGCTACATAGAATTGGTAGATTTTGAGGGAAAAA
AAAGAAAAAAGAAGAAAGGAGTATGAGCTTTAATTTATGTATGGTGATTT
TGATTGCGGAGAAGTCGAAGACAGCGGGAACTGCTGTTATTGCGGAGAGT
GTTGATTCCTGAGGCAATATTTAATCTTGAGAAGAGAAGGAGATCTTGCT
TAGTTACAAGAATATGGCTGTTCAAGACGAATGTGGAGGTAATCATTCAA
ATTCGGTTTTCTCGGCTGGCAATGGAATTGAATCAAGTTCTGGCCTGCAT
ACTGTAACTGGTCTTGAAGTAAAGGATCAGTTTTCTTGTGGGAACGATTT
TGCTCCCAAGCCAAGAAAACCATACACAATCACAAAGCAAAGAGAAAGAT
GGACGGAAGAAGAGCATAAGAAATTCCTTGAAGCTCTAAAGCTGTTTGGT
CGAGCGTGGCGGAAGATAGAGGAACATGTGGGCACAAAGACTGCAGTGCA
GATACGAAGCCATGCTCAGAAATTCTTTTCTAAGGTTTGCTGCTCTTATT
ACAGTGCATATTCTACTATAATATCATTTTGCTTTCTTCTAAAGTTGAAT
TTTGACTGAACCCGGGGAGATTTTGGAAGGTGGGTTTTGTTCATTTTTGT
GTCATTCTTACTCCTCTGTTTGNGCTCTTTGGCAGGGTGTTGTTCATGTA
TCATGTCATTCTTACTNCTNCATTTGNGCTCTTTGGGNAGGTTGTTCGCC
GAGTAAATGGCTGCAGACAAGCCCAGTGGAACCCGTCGAAATTTCTCCTC
CTCGACCAAACGAAAACTATGCACCCTACCT
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